• Title/Summary/Keyword: geographic variations

Search Result 150, Processing Time 0.029 seconds

Population analysis of the toxic dinoflagellate genus Alexandrium by novel molecular markers

  • Kim, Choong-jae;Kim, Sook-Yang;Kim, Kui-Young;Kang, Young-Sil;Kim, Hak-Gyoon;Kim, Chang-Hoon
    • Proceedings of the Korean Aquaculture Society Conference
    • /
    • 2003.10a
    • /
    • pp.134-135
    • /
    • 2003
  • The geographic expansion of the toxic dinoflagellates genus Alexandrium has been shown to be world wide ranging. The members of the genus Alexandrium ocnstituted of 20-30 species did not show substantial differences in their morphology, which is mostly referred in the 'tamarensis species complex', except some species. Though rDNA sequences variations are very few and pseudogene types are so diverse that it is difficult to use them as the specific markers. In this study, we outlined Korean and Japanese A, tamarense and A. catenella regional isolates by phylogenetic analysis inferred from no cutting alignments of LSU rDNA D1-D2 and SSU rDNA sequences to group these regional isolates. The results were compared to RFLP patterns of PCR products targeted chloroplast DNA. Lastly screening of highly repeated microsatellite DNA which is frequently used for population analysis in eukaryotes was conducted. A. catenella regional strains identified by the sequencing of rDNA D1-D2 domain were divided into at least 3 groups of type E, CMC and Chinese type, divergence root may not be deep comparing with that of A. tamarense whose pseudogenes are very variable. Results of RFLP pattern and the phylogeny of the unknown gene targeting chloroplast showed that Korean and Japanese A. catenella regional isolates were divided into 3 types: Korean, Japanese and the third CMC types. Population-specific PCR amplification with Japanese A. catenella type-specific PCR primers was useful method for population analysis of A. catenella. Various types of satellite sequences such as 5 nucleotides repeats were obtained from A. tamarense and A. catenella. The 5 nucleotides repeats were primed at the both 3'and 5' ends, and these repeats were prominent as longer repeated motifs. This repeated DNA was intercalated as internal sequences containing various types subrepeats. It is expected that these satellite DNA would be a useful molecular population marker through detail comparison among Alexandrium regional isolates to trace their transferring pathway and to prevent their human-associated their regional extents.

  • PDF

Web-based Geovisualization System of Oceanographic Information using Dynamic Particles and HTML5 (동적 파티클과 HTML5를 이용한 웹기반 해양정보 가시화시스템)

  • Kim, Jinah;Kim, Sukjin
    • KIISE Transactions on Computing Practices
    • /
    • v.23 no.12
    • /
    • pp.660-669
    • /
    • 2017
  • In order to improve user accessibility and interactivity, system scalability, service speed, and a non-standard internet web environment, we developed a Web-based geovisualization system of oceanographic information using HTML5 and dynamic particles. In particular, oceanographic and meteorological data generated from a satellite remote sensing and radar measurement and a 3-dimensioanl numerical model, has the characteristics of a heterogeneous large-capacity multi-dimensional continuous spatial and temporal variability, based on geographic information. Considering those attributes, we applied dynamic particles represent the spatial and temporal variations of vector type oceanographic data. HTML5, WebGL, Canvas, D3, and Leaflet map libraries were also applied to handle various multimedia data, graphics, map services, and location-based service as well as to implement multidimensional spatial and statistical analyses such as a UV chart.

Distribution characteristics of dissolved and particulate trace metals in Kwangyang Bay, Korea (광양만의 용존성 및 입자성 미량금속의 분포특성)

  • Chin, Yong-Hyun;Kim, Kyung-Tae;Kim, Suk-Hyun;Yang, Dong-Beom;Hong, Gi-Hoon;Lee, Kwang-Woo
    • Journal of Korean Society on Water Environment
    • /
    • v.16 no.4
    • /
    • pp.421-430
    • /
    • 2000
  • To study the distribution and the behavior of trace metals in Kwangyang Bay, surface water samples were collected four times from August 1997 to May 1998 and were analyzed for trace metals (Cd, Co, Cu, Fe, Ni, Pb, Zn) by Atomic Absorption Spectrometer and Inductively Coupled Plasma Mass Spectrometer. Dissolved Co and Fe concentrations were comparatively high near the Seomjin River mouth. Particulate trace metal contents were relatively high near the Sueochun River mouth and near the Yeochun industrial complex. Distribution coefficients ($K_d$; $Lkg^1$) between dissolved and particulate phases of Fe, Pb, Co, Zn, Ni, Cu and Cd were $1.67{\times}10^8$, $1.37{\times}10^6$, $7.25{\times}10^5$, $4.43{\times}10^5$, $1.39{\times}10^5$, $9.1{\times}10^4$ and $1.8{\times}10^4$, respectively. In Kwangyang Bay, particulate trace-metal concentrations were as high as dissolved ones and showed seasonal and geographic variations.

  • PDF

Heavy Metal Contamination and Spatial Differences in Redox Condition of the Artificial Shihwa lake, Korea (시화호의 중금속 오염과 산화-환원 상태의 공간적 차이)

  • Hyeon, Sang-Min;Kim, Eun-Su;Paeng, U-Hyeon
    • Journal of Environmental Science International
    • /
    • v.13 no.5
    • /
    • pp.479-488
    • /
    • 2004
  • Five sediment cores from the tidal flat of artificial Lake Shihwa are analyzed in terms of sedimentology and geochemistry to evaluate the heavy metal contamination and redox condition of surficial sediment following the Shihwa seawall construction. The variability of concentrations of various elements depends on the depositional environment, and reflects the various redox conditions and sediment provenances. The amounts of Ti and Al and their ratio of Ti/ Al with respect to Li clearly indicate that there is an anthropogenic contribution to the surficial sediment. The high concentrations of heavy metals suggest an anthropogenic contribution at ST. 34 and ST. 22. Concentrations of most elements (Cr, Cu, Zn and Pb) are higher near the Shihwa-Banwol industrial complex than in the central part of Lake Shihwa. Concentrations of heavy metal in surficial sediment near the Shihwa-Banwol industrial complex are two to eight times higher than in the center of Lake Shihwa. Enrichment factors (EF), which are normalized by the unpolluted shale, suggests a significant metallic contamination near the Shihwa-Banwol industrial complex (SBIC). The redox condition is divided into two anoxic and mixed oxi $c_oxic zones based on the carbon:sulfur (C/S) ratios of organic matter and elemental relationships. Correlations among geochemical elements Mn, U and Mo are significantly different from site to site, and may therefore be an indicator of the spatial redox condition. Controlling factors for switching anoxic/oxic conditions are thought to be water depth and the differences in industrial effluent supply. The variations of the Cu/Mn ratio in the sediments confirms above mentioned spatial differences of a redox condition in part, and therefore shows a location-dependence redox condition in sediments at four other sites. The redox condition of the surficial sediment characteristics of the Shihwa Lake are controlled by its geographic location and water depth.th.

A Study on the Biotope's Characters of the Mixed Rural City(II) - The Analysis of Change in Land Uses and Forest Structure of Sunghwan in Chonan City using Remote Sensing - (도농통합형 도시에 있어서 생물서식처 공간특성에 관한 연구(II) - 천안시 성환읍의 토지이용변화추이와 녹지구조변화를 중심으로 -)

  • Lee, Jin-Hee;Bang, Kwang-Ja;Kim, Hoon-Hee
    • Journal of the Korean Society of Environmental Restoration Technology
    • /
    • v.2 no.1
    • /
    • pp.38-47
    • /
    • 1999
  • The mixed rural city is adjusting to change by urbanization. The recent landcover change in mixed rural city is an important factor that changes structure and function of regional ecosystem. Landscape ecology is an integrated ecology widely available for environmental science such as nature conservation and sustainable land-use planning. As the concern about environmental quality rises, many studies are trying to create and conservate for biotop. The creation of biotop is related to the plan and management of the effective landuse because the important factor to change the structure and function of ecological area in the country. This study was carried out to establish the foundation of the landuse plan to analyze the change of landuse and to plan the scheme in creating biotop and landuse. We used the approach of ecological landscape and using landscape indices with RS(Remote Sensing) and GIS(Geographic Information System) technology, spatio-temporal variations of areas and distribution of forest patches were examined in the Sunghwan in Chonan from 1985 to 1996. A result of this study showed that the area of forest and paddy decreased by urban sprawl. The size of patch in the forest and agriculture had been smaller and irregular form, heterogeneity of size of forest and agriculture patches within sub-basin was increased, pattern of forest and agriculture patches decreased the corridor and network from 1985 to 1996.

  • PDF

Genetic Variation of Taenia Pisiformis Collected from Sichuan, China, Based on the Mitochondrial Cytochrome b gene

  • Yang, Deying;Ren, Yongjun;Fu, Yan;Xie, Yue;Nie, Huaming;Nong, Xiang;Gu, Xiaobin;Wang, Shuxian;Peng, Xuerong;Yang, Guangyou
    • Parasites, Hosts and Diseases
    • /
    • v.51 no.4
    • /
    • pp.449-452
    • /
    • 2013
  • Taenia pisiformis is one of the most important parasites of canines and rabbits. T. pisiformis cysticercus (the larval stage) causes severe damage to rabbit breeding, which results in huge economic losses. In this study, the genetic variation of T. pisiformis was determined in Sichuan Province, China. Fragments of the mitochondrial cytochrome b (cytb) (922 bp) gene were amplified in 53 isolates from 8 regions of T. pisiformis. Overall, 12 haplotypes were found in these 53 cytb sequences. Molecular genetic variations showed 98.4% genetic variation derived from intra-region. $F_{ST}$ and Nm values suggested that 53 isolates were not genetically differentiated and had low levels of genetic diversity. Neutrality indices of the cytb sequences showed the evolution of T. pisiformis followed a neutral mode. Phylogenetic analysis revealed no correlation between phylogeny and geographic distribution. These findings indicate that 53 isolates of T. pisiformis keep a low genetic variation, which provide useful knowledge for monitoring changes in parasite populations for future control strategies.

Influence of Greenhouse Gases on Radiative Forcing at Urban Center and Background Sites on Jeju Island Using the Atmospheric Radiative Transfer Model (대기복사전달모델을 이용한 제주지역 도심 및 배경지점에서의 온실가스에 따른 복사강제력 영향 연구)

  • Lee, Soo-Jeong;Song, Sang-Keun;Han, Seung-Beom
    • Atmosphere
    • /
    • v.27 no.4
    • /
    • pp.423-433
    • /
    • 2017
  • The spatial and temporal variations in radiative forcing (RF) and mean temperature changes of greenhouse gases (GHGs), such as $CO_2$, $CH_4$, and $N_2O$, were analyzed at urban center (Yeon-dong) and background sites (Gosan) on Jeju Island during 2010~2015, based on a modeling approach (i.e., radiative transfer model). Overall, the RFs and mean temperature changes of $CO_2$ at Yeon-dong during most years (except for 2014) were estimated to be higher than those at Gosan. This might be possibly because of its higher concentrations at Yeon-dong due to relatively large energy consumption and small photosynthesis and also the difference in radiation flux due to the different input condition (e.g., local time and geographic coordinates of solar zenith angle) in the model. The annual mean RFs and temperature changes of $CO_2$ were highest in 2015 ($2.41Wm^{-2}$ and 1.76 K) at Yeon-dong and in 2013 ($2.22Wm^{-2}$ and 1.62 K) at Gosan (except for 2010 and 2011). The maximum monthly/seasonal mean RFs and temperature changes of $CO_2$ occurred in spring (Mar. and/or Apr.) or winter (Jan. and/or Feb.) at the two sites during the study period, whereas the minimum RFs and temperature changes in summer (Jun.-Aug.). In the case of $CH_4$ and $N_2O$, their impacts on the RF and mean temperature changes were very small (an order of magnitude lower) compared to $CO_2$. The spatio-temporal differences in these RF values of GHGs might primarily depend on the atmospheric profile (e.g., ozone profile), surface albedo, local time (or solar zenith angle), as well as their mass concentrations.

Geographic Variations in Four Freshwater Crab (Eriocheir sinensis) Populations throughout Its Distribution Range (분포지역에 따른 민물가재 4집단(Eriocheir sinensis)의 지리적 변이)

  • Yoon, Jong-Man
    • Development and Reproduction
    • /
    • v.13 no.2
    • /
    • pp.97-103
    • /
    • 2009
  • Genomic DNA samples isolated from four geographical freshwater crab (Eriocheir sinensis) populations collected in the inland of the Korean Peninsula (Gunsan, Paju, and Nampo) and a Chinese site, were used for PCR amplification. Seven decamer primers generated 19 specific loci (19/243 loci, 7.81%) in the Gunsan population, 32 (32/215 loci, 14.88%) in the Paju population, 19 (19/231 loci, 8.23%) in the Nampo population and 62 (62/340 loci, 18.24%) in a Chinese population. The average 8.9 specific loci exhibited inter-individual-specific characteristics, thus revealing DNA polymorphisms in the Chinese population. The number of unique shared loci to each population and number of shared loci by the four populations were generated by molecular analysis using seven primers in four populations. 35 unique shared loci to each population, with an average of 5.0 per primer, were observed in the Gunsan population, and 50 loci, with an average of 7.1 per primer, were observed in the Chinese population. The hierarchical dendrogram indicates three main branches: cluster 1 (GUNSAN 01$\sim$GUNSAN 05, PAJU 06$\sim$PAJU 10 and NAMPO 11$\sim$NAMPO 15) and cluster 2 (CHINESE 16, 17, 18, 19 and 20). Conclusively individual no. 20 of the PAJU 10 freshwater crab was most distantly related to CHINESE no. 20 (genetic distance = 0.667). Taken together, these results demonstrate the potential of RAPD analysis to identify diagnostic markers for the identification of four freshwater crab populations.

  • PDF

Development of Severity-Adjustment Model for Length of Stay in Hospital for Percutaneous Coronary Interventions (관상동맥중재술 환자의 재원일수 중증도 보정 모형 개발)

  • Nam, Mun-Hee;Kang, Sung-Hong;Lim, Ji-Hye
    • The Journal of the Korea Contents Association
    • /
    • v.11 no.9
    • /
    • pp.372-383
    • /
    • 2011
  • Our study was carried out to develop the severity-adjustment model for length of stay in hospital for percutaneous coronary interventions so that we would analysis the factors on the variation in length of stay(LOS). The subjects were 1,011 percutaneous coronary interventions inpatients of the Korean National Hospital Discharge In-depth Injury Survey 2004-2006 data. The data were analyzed using t-test and ANOVA and the severity-adjustment model was developed using data mining technique. After yielding the standardized value of the difference between crude and expected length of stay, we analysed the variation of length of stay for percutaneous coronary interventions. There was variation of LOS in regional differences, size of sickbed and insurance type. The variation of length of stay controlling the case mix or severity of illness can be explained the factors of provider. This supply factors in LOS variations should be more studied for individual practice style or patient management practices and healthcare resources or environment. We expect that the severity-adjustment model using administrative databases should be more adapted in other diseases in practical.

An Application of GIS Technique to Analyze the Location of Bank Branch Offices : The case of Kangnam-Gu , Seoul (GIS기법을 활용한 은행입지분석에 관한 연구 - 서울시 강남구를 사례로 하여)

  • 이희연;김은미
    • Spatial Information Research
    • /
    • v.5 no.1
    • /
    • pp.11-26
    • /
    • 1997
  • The purpose of this study is to analyze the locational characteristics of bank branch offices in Kangnam-Gu, Seoul by using Geographic Information System. The number of bank branch offices have sharply increased due to financial liberalization, while the scale of them is getting smaller. The procedure of this research has four steps. First, the spatial distribution of bank branch offices in Seoul is analyzed by the places and time. Second, the spatial variations of bank offices in dong districts of Seoul is explained by factor analysis and multiple regression analysis. Third, the location-allocation model which is embedded within network module in Arc/Info is applied in order to find out optimal location of bank offices in Kangnam-Gu. Finally, the grid module is used in creating the potential surface map for locational sites of new bank branch offices The factors to affect the location of the bank offices contain mainly economic variables including local tax, collUl1ercial area, total establismnent and total employment. The actual locational pattern of bank offices is similar to the idealized locational pattern proposed by the function of min-distance in location-allocation models. In conclusion, this study shows that spatial analysis functions may potentially be improved using GIS technologies. However in order to analyze the location of bank offices more precisely, it should be found out the way to collect more appropriate data, construct computerized base maps, and investigate consumer behaviour and behavioural characteristics of bank themselves..

  • PDF