• Title/Summary/Keyword: geographic clusters

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Genetic Variations between Hairtail (Trichiurus lepturus) Populations from Korea and China

  • Yoon, Jong-Man
    • Development and Reproduction
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    • v.17 no.4
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    • pp.363-367
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    • 2013
  • PCR analysis generated on the genetic data showed that the geographic hairtail (Trichiurus lepturus) population from Korea in the Yellow Sea was more or less separated from geographic hairtail population from China in the South Sea. The average bandsharing value ($mean{\pm}SD$) within hairtail population from Korea showed $0.859{\pm}0.031$, whereas $0.752{\pm}0.039$ within population from China. Also, bandsharing values between two hairtail populations ranged from 0.470 to 0.611, with an average of $0.542{\pm}0.059$. As compared separately, the bandsharing values of individuals within hairtail population from Korea were comparatively higher than those of individuals within population from China. The hierarchical dendrogram resulted from reliable oligonucleotides primers, indicating two genetic clusters composed of cluster 1 (KOREANHAIR1~KOREANHAIR11) and cluster 2 (CHINESEHAI12~CHINESEHAI22). The genetic distances between two geographic populations ranged from 0.038 to 0.476. Individual No. 11 within hairtail population from Korea was genetically closely related with No. 10 (genetic distance=0.038). The longest genetic distance (0.476) displaying significant molecular difference was also between individual No. 01 within hairtail population from Korea and No. 22 from Chinese. In the present study, PCR analysis has revealed significant genetic distances between two hairtail population pairs (P<0.05).

Geographic Variations of Three Fulvia mutica Populations

  • Kang, Seo-Kyeong;Yoon, Jong-Man
    • The Korean Journal of Malacology
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    • v.29 no.3
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    • pp.163-169
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    • 2013
  • In the present study, the seven primers BION-33, BION-34, BION-37, BION-41, BION-44, BION-45 and BION-42 generated the total number of loci, average number of loci per lane and specific loci in Hongseong, Yeosu and Goheung population of F. mutica, respectively. 7 primers generated 19 specific loci in the Hongseong population, 29.3 in the Yeosu population and 23.1 in the Goheung population, respectively. Especially, the decamer primer BION-37 generated 7 unique loci to each population, which were identifying each population, approximately 700 bp in Hongseong population. In this study, the dendrogram obtained by the seven primers indicates three genetic clusters: cluster 1 (HONGSEONG 01-HONGSEONG 07), cluster 2 (YEOSU 08-YEOSU 14) and cluster 3 (GOHEUNG 15-GOHEUNG 21). Among the twenty one cockles, the shortest genetic distance that displayed significant molecular differences was between individuals 17 and 19 from the Goheung population (genetic distance = 0.051), while the longest genetic distance among the twenty-one cockle individuals that displayed significant molecular differences was between individuals HONGSEONG no. 03 and YEOSU no. 12 (genetic distance = 0.616). Relatively, individuals of YEOSU population were fairly closely related to that of GOHEUNG population. Ultimately, PCR fragments revealed of in this study may be useful as a DNA marker the three geographic populations to distinguish.

Analysis of Molecular Variance and Population Structure of Sesame (Sesamum indicum L.) Genotypes Using Simple Sequence Repeat Markers

  • Asekova, Sovetgul;Kulkarni, Krishnanand P.;Oh, Ki Won;Lee, Myung-Hee;Oh, Eunyoung;Kim, Jung-In;Yeo, Un-Sang;Pae, Suk-Bok;Ha, Tae Joung;Kim, Sung Up
    • Plant Breeding and Biotechnology
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    • v.6 no.4
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    • pp.321-336
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    • 2018
  • Sesame (Sesamum indicum L.) is an important oilseed crop grown in tropical and subtropical areas. The objective of this study was to investigate the genetic relationships among 129 sesame landraces and cultivars using simple sequence repeat (SSR) markers. Out of 70 SSRs, 23 were found to be informative and produced 157 alleles. The number of alleles per locus ranged from 3 - 14, whereas polymorphic information content ranged from 0.33 - 0.86. A distance-based phylogenetic analysis revealed two major and six minor clusters. The population structure analysis using a Bayesian model-based program in STRUCTURE 2.3.4 divided 129 sesame accessions into three major populations (K = 3). Based on pairwise comparison estimates, Pop1 was observed to be genetically close to Pop2 with $F_{ST}$ value of 0.15, while Pop2 and Pop3 were genetically closest with $F_{ST}$ value of 0.08. Analysis of molecular variance revealed a high percentage of variability among individuals within populations (85.84%) than among the populations (14.16%). Similarly, a high variance was observed among the individuals within the country of origins (90.45%) than between the countries of origins. The grouping of genotypes in clusters was not related to their geographic origin indicating considerable gene flow among sesame genotypes across the selected geographic regions. The SSR markers used in the present study were able to distinguish closely linked sesame genotypes, thereby showing their usefulness in assessing the potentially important source of genetic variation. These markers can be used for future sesame varietal classification, conservation, and other breeding purposes.

Efficiency Enhancement Plan of the Ambiguity Leveling System for Multiple Clusters (미지정수 수준 조정을 고려한 다중클러스터 시스템 효율화 방안)

  • Yu, Sunkyoung;Song, Junesol;Kee, Changdon
    • Journal of Advanced Navigation Technology
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    • v.21 no.6
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    • pp.572-578
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    • 2017
  • As the demand of high accuracy positioning for dynamic users increases, Network RTK is actively researched for dynamic users. Network RTK is a system which provides precise positioning in the range of about 50 to 70km radius using carrier phase measurements from several reference stations. By configuring multiple clusters, which provide Network RTK corrections independently, as a single system, it could provide precise positioning for a wider area. In this paper, we have studied how to efficiently operate multiple clusters in the Korean Peninsula. We analyzed the computational load according to the configuration of a multi-cluster system and proposed a method of selecting the main reference station and system infrastructure configuration for efficient operation. In order to analyze the effects of each proposed method, 71 clusters were constructed using the reference stations of the National Geographic Information Institute and simulations were conducted. As a result of the simulation, system computation amount was reduced by 66 % and system configuration cost was reduced by 90 %.

Efficiency Evaluation of Vegetative Filter Strip for Non-point Source Pollutant at Dense Upland Areas - Focused on Non-point Source Management Area Mandae, Gaa, and Jaun Basins - (고랭지밭 밀집지역 초생대의 비점오염 저감 효율 평가 - 비점오염원 관리지역을 중심으로 (만대지구, 가아지구, 자운지구) -)

  • Jeong, Yeonji;Lee, Dongjun;Kang, Hyunwoo;Jang, Won Seok;Hong, Jiyoung;Lim, Kyoung Jae
    • Journal of The Korean Society of Agricultural Engineers
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    • v.64 no.4
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    • pp.1-10
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    • 2022
  • A vegetative filter strip (VFS) is one of the best management practices (BMPs) to reduce pollutant loads. This study aims to assess the effectiveness of VFS in dense upland field areas. The study areas are agricultural fields in the Maedae (MD), Gaa (GA), and Jaun (JU) watersheds, where severe sediment yields have occurred and the Korean government has designated them as non-point management regions. The agricultural fields were divided into three or four clusters for each watershed based on their slope, slope length, and area (e.g., MD1, MD2). To assess the sediment trapping (STE) and pesticide reduction efficiency (PRE) of VFS, the Vegetative Filter Strip Modeling System (VFSMOD) was applied with three different scenarios (SC) (SC1: VFS with rye vegetation; SC2: VFS with rye vegetation and a gentle slope in VFS range; and SC3: VFS with grass mixture). For SC1, there were relatively short slope lengths and small areas in the MD1 and GA3 clusters, and they showed higher pollutant reduction (STE>50%, PRE>25%). For SC2 and SC3, all clusters in GA and some clusters (MD1 and MD3) in MD show higher pollutant reduction (>25%), while the uplands in JU still show a lower pollutant (<25%). With correlation analysis between geographic characteristics and VFS effectiveness slope and slope length showed relative higher correlations with the pollutant efficiency than a area. The results of this study implied that slope and slope length should be considered to find suitable upland conditions for VFS installations.

Main Memory Spatial Database Clusters for Large Scale Web Geographic Information Systems (대규모 웹 지리정보시스템을 위한 메모리 상주 공간 데이터베이스 클러스터)

  • Lee, Jae-Dong
    • Journal of Korea Spatial Information System Society
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    • v.6 no.1 s.11
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    • pp.3-17
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    • 2004
  • With the rapid growth of the Internet geographic information services through the WWW such as a location-based service and so on. Web GISs (Geographic Information Systems) have also come to be a cluster-based architecture like most other information systems. That is, in order to guarntee high quality of geographic information service without regard to the rapid growth of the number of users, web GISs need cluster-based architecture that will be cost-effective and have high availability and scalability. This paper proposes the design of the cluster-based web GIS with high availability and scalability. For this, each node within a cluster-based web GIS consists of main memory spatial databases which accomplish role of caching by using data declustering and the locality of spatial query. Not only simple region queries but also the proposed system processed spatial join queries effectively. Compare to the existing method. Parallel R-tree spatial join for a shared-Nothing architecture, the result of simulation experiments represents that the proposed spatial join method achieves improvement of performance respectively 23% and 30% as data quantity and nodes of cluster become large.

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Parallelization of Raster GIS Operations Using PC Clusters (PC 클러스터를 이용한 래스터 GIS 연산의 병렬화)

  • 신윤호;박수홍
    • Spatial Information Research
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    • v.11 no.3
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    • pp.213-226
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    • 2003
  • With the increasing demand of processing massive geographic data, conventional GISs based on the single processor architecture appear to be problematic. Especially, performing complex GIS operations on the massive geographic data is very time consuming and even impossible. This is due to the processor speed development does not keep up with the data volume to be processed. In the field of GIS, this PC clustering is one of the emerging technology for handling massive geographic data effectively. In this study, a MPI(Message Passing Interface)-based parallel processing approach was conducted to implement the existing raster GIS operations that typically requires massive geographic data sets in order to improve the processing capabilities and performance. Specially for this research, four types of raster CIS operations that Tomlin(1990) has introduced for systematic analysis of raster GIS operation. A data decomposition method was designed and implemented for selected raster GIS operations.

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The Concept of Extended Industrial Cluster and Its Policy Directions (광역클러스터 개념의 도입과 정책과제)

  • 주성재
    • Journal of the Economic Geographical Society of Korea
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    • v.6 no.2
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    • pp.327-338
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    • 2003
  • The concept of industrial cluster began with the agglomeration economies occurring in a small scale place, which are mainly drawn from intense networking between companies, universities, research centers and other institutional bodies. Recently, however, as cooperation between autonomous administrative units and between industrial clusters has been more active than ever, there has emerged the concept of extended industrial cluster (EIC) and, subsequently, policy measures for nurturing it. This study focuses on the concept of EIC, mainly in the perspective of the need to adopt it into the industrial cluster literature. The study identifies the raison d'etre of EIC in the respects of the flexibility of geographic range, complementarity and cooperation between functions and regions, scale economies and productivity, and the development stage of industrial clusters. It also suggests how to establish the concept of EIC in the Korean context and how to apply EIC policy in the Korean industrial policy.

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Strengthening the Competitiveness, Productivity and Innovation of Cross-border Industrial Corridors

  • Charles Conteh;JiYoung Park;Kathryn Friedman;Ha Hwang;Barry Wright
    • Asian Journal of Innovation and Policy
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    • v.12 no.1
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    • pp.75-100
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    • 2023
  • Over the past few decades, globalization has been shifting economic power upward to transnational actors on the one hand, and downward to subnational or regional spaces on the other. This phenomenon has resulted in the centrality of territorially delimited subnational regions acting as critical loci of economic governance within a complex and globally distributed value chain of trade and service flows. Within this broader context of industrial restructuring are economic regions that span national borders in their collective assets. The paper focuses on investigating the economic competitiveness and productivity of cross-border (or binational) economic regions. Using the conceptual framework of economic clusters, an econometric model that measures proxies of geographic proximity of firms in the life sciences cluster, and a new binational economic model, the paper examines the key characteristics, potentials and constraints of economic competitiveness and productivity in a cross-border region comprising counties in Western New York and regional municipalities in Southern Ontario. The findings demonstrate the direct and indirect benefits of closer cross-border economic cooperation. The paper then concludes with some policy observations about leveraging cross-border economic clusters for strategic industrial cooperation.

Geographic Variations and Genetic Distance of Three Geographic Cyclina Clam (Cyclina sinensis Gmelin) Populations from the Yellow Sea

  • Yoon, Jong-Man
    • Development and Reproduction
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    • v.16 no.4
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    • pp.315-320
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    • 2012
  • The gDNA isolated from Cyclina sinensis from Gochang (GOCHANG), Incheon (INCHEON) and a Chinese site (CHINESE), were amplified by PCR. Here, the seven oligonucleotide decamer primers (BION-66, BION-68, BION-72, BION-73, BION-74, BION-76, and BION-80) were used to generate the unique shared loci to each population and shared loci by the three cyclina clam populations. As regards multiple comparisons of average bandsharing value results, cyclina clam population from Chinese (0.763) exhibited higher bandsharing values than did clam from Incheon (0.681). In this study, the dendrogram obtained by the seven decamer primers indicates three genetic clusters: cluster 1 (GOCHANG 01~GOCHANG 07), cluster 2 (INCHEON 08~INCHEON 14), cluster 3 (CHINESE 15~CHINESE 21). The shortest genetic distance that displayed significant molecular differences was between individuals 15 and 17 from the Chinese cyclina clam (0.049), while the longest genetic distance among the twenty-one cyclina clams that displayed significant molecular differences was between individuals GOCHANG no. 03 and INCHEON no. 12 (0.575). Individuals of Incheon cyclina clam population was somewhat closely related to that of Chinese cyclina clam population. In conclusion, our PCR analysis revealed a significant genetic distance among the three cyclina clam populations.