• Journal of Yeungnam Medical Science
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• 제12권2호
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• pp.366-385
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• 1995

항산균 감염증의 예방 및 치료를 위하여는 역학적인 연구가 중요하다. 본 연구에서는 감염증의 분자역학적 연구를 위한 기법중 아직 항산균을 대상으로 pulsed-field gel electrophoresis (PFGE) 분석법을 확립하고자 하였다. PFGE분석에 적절한 제한효소는 DraI, AsnI 및 XbaI 등이었고 각 제한효소마다 최적의 PFGE조건은 서로 달랐다. DraI의 경우는 두단계로 나누어 전기영동을 시행하였다. 제1단계의 initial pulse는 10초 final pulse는 15초였으며 제2단계는 initial pulse는 60초 final pulse는 70초이었다. 전기영동시간은 각 단계마다 각각 14시간씩이었다. XbaI의 경우는 제2단계 없이 initial pulse가 3초 final pulse가 12초였고 전기영동시간은 22시간이었다. AsnI의 경우는 제2단계 없이 initial pulse가 5초 final pulse가 25초였고 전기영동시간은 22시간이었다. 모든 경우에 있어서 전압은 200V로 하였다. 표준균주로는 M. bovis BCG, M. tuberculosis 및 M. fortuitum등을 사용하였는데 PFGE분석상 동일균종내에서 표준균주들 간의 차이는 발견할 수 없었다. 임상에서 분리된 9주의 M. fortuitum 균주를 대상으로 AsnI 제한효소로 PFGE분석을 시행한 결과 2주만을 제외하고는 서로 간의 유전형 분류가 가능하였다. 균주간의 유전적 거리를 결정하기 위하여 cluster analysis를 시행한 결과 M. fortuitum 균주들은 크게 두 집단으로 나뉘었다. 제한효소 AsnI으로 동일 균종의 분류가 안되는 M. fortuitum 균주들은 XbaI 제한효소을 사용한 PFGE분석으로 유전형의 구분이 가능하였다. Cluster analysis를 시행한 결과 크게 두 집단으로 나뉘었던 M. fortuitum 균주들은 보다 복잡한 집단으로 분류되어 XbaI을 사용한 PFGE분석법이 M. fortuitum 균주분류를 위하여는 보다 적절함을 알 수 있었다. Cluster analysis에서 얻은 최대 % dissimilarity 값은 0.74(AsnI) 및 0.75(XbaI)로서 이 값은 arbitrarily primed polymerase chain reaction(AP-PCR)법보다는 높고 restriction fragment length polymorphism(RFLP) 법보다는 낮아 PFGE법이 RFLP를 보완하거나 대치할 수 있는 세균 유전형 분석법임을 알 수 있었다.

• 대한미생물학회지
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• 제35권2호
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• pp.97-108
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• 2000

Two-dimensional gel electrophoresis (2-DE) is an essential tool of proteomics to analyse the entire set of proteins of an organism and its variation between organisms. Helicobacter pylori was tried to identify differences between strains. As the first step, whole H. pylori was lysed using high concentration urea contained lysis buffer [9.5 M Urea, 4% CHAPS, 35 mM Tris, 65 mM DTT, 0.01% SDS and 0.5% Ampholite (Bio-Rad, pH 3-10)]. The extract ($10\;{\mu}g$) was rehydrated to commercially available immobilised pH gradient (IPG) strips, then the proteins were separated according to their charges as the first dimensional separation. The IPG strips were placed on Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis (SDS-PAGE) to separate according to molecular mass of the proteins as the second dimension. The separated protein spots were visualised by silver staining in order to compare different expression of proteins between strains. Approximately 120 spots were identified in each mini-protein electrophoresised gel, furthermore about 65 to 75 spots were regarded as identical proteins in terms of pI value and molecular weight between strains used. In addition, distinct differences were found between strains, such as 219-1, Y7 and Y14, CH150. Two representative strains were examined using strips which had pH range from 4 to 7. This strips showed a number of isoforms which were considered large spots on pH range 3-10. Furthermore, the rest of spots on pH 4-7 IPG strips appeared very distinctive compared to broad range IPG strips. 2-DE seems to be an excellent tool for analysing and identifying variations between H. pylori strains.

• 대한미생물학회지
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• 제35권2호
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• pp.171-180
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• 2000

Ninety two strains of Streptococcus pyogenes were isolated from patients with pharyngitis, scarlet fever, skin infection, and invasive streptococcal infections in Seoul, Korea from January to December, 1998. All isolates were epidemiologically characterized by T protein serotype, and serum opacity factor (OF) detection to phenotypes. To analyze the genetic relationship, fifty two isolates including 32 erythromycin-clindamycin (Em-Cm) resistant strains, 20 antimicrobial susceptible strains were attempted to the pulsed-field gel electrophoresis (PFGE). T protein serotype showed 16 kinds in distribution including T12 and T4. Among the total isolates, 40 strains (43.5%) belonged to the T12 serotype and twenty strains (21.7%) to T4 serotype. On the other hand, when infection aspect of S. pyogenes isolates were analysed by T serotype distribution, T12 type was predominant for pharyngitidis which contributed to 21 strains (53%) and for skin infection isolates which contributed to 11 strains (28%), respectively. In case of T4 type, it was the most predominant pharyngitidis isolates which contributed to 8 strains (40%). In T serotype distribution of Em-Cm resistant strains, 27 strains (84%) of the thirty two showed T12 serotype. In minimum inhibitory concentration (MIC) values of Em-Cm resistance isolates, thirty two isolates showed resistant to erythromycin 27 strains (84%), had high MIC of >$128\;{\mu}g/ml$. And also to clindamycin, twenty two strains (69%) had high MIC of >$128\;{\mu}g/ml$. When OF detection of Em-Cm resistance of S. pyogenes isolates were analyzed by T serotype distribution, T12 serotype isolates revealed that all of the isolates except one strain were OF negative. In PFGE profile analysis to Em-Cm resistance isolates, of the twenty seven, Em-Cm resistance of T12 serotype isolates, 26 strains showed identical PFGE profile and all of these isolates revealed that OF negative. Eighty four percent of Em-Cm resistance S. pyogenes isolates had identical phenotype and PFGE profile. These results strongly suggested that the Em-Cm resistant S. pyogenes isolates from Seoul area showed close genetic correlation and PFGE could be available tool for molecular epidemiology.

• 대한화학회지
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• 제18권2호
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• pp.132-137
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• 1974

酸性 mucopolysaccharide는 鯨胎兒의 nucleus pulposus에서 分離하였다. Gel electophoresis에 있어서 酸性 mucopolysaccharide의 分離는 $0.03{\%}$의 hexamine cobaltic chloride 를 含有하는 0.05M 醋酸소-다 緩衝溶液(pH4.8)中에서 가장 좋았다. Spacer gel 上의 mucopolysaccharide 溶液을 $40{\%}$ sucrose 溶液으로 덮었을 때 mucopolysaccharide의 移動度에 變化가 나타나는 것을 觀察하였으며 이 효과는 醋酸소-다 緩衝溶液에 hexamine cobaltic chloride 을 加하면 消失하는 것을 觀察하였다.

• 한국전기전자재료학회:학술대회논문집
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• 한국전기전자재료학회 2000년도 하계학술대회 논문집
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• pp.814-819
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• 2000

The progress in the field of electronic materials has been especially significant for applications involving a range of electrical properties. Its importance is increasing with the increasing demand for integrated circuits. The sol-gel technique has been used for many years, and the metal alkoxides have featured prominently as source materials. The method consist of making a homogeneous solution of the component metal alkoxides in a suitable solvent, usually the parent alcohol; and then causing the hydrolysis under controlled conditions to produce a gel containing the hydrated metal oxide. The gel is then dried, and fired to produce a ceramic or glassy material at a temperature much lower than that required by the conventional melting process. This project consists of important theoretical considerations, processing techniques and applications related to electrophoresis derived thin films. In the electrophoretic process a metal alkoxide solution is gelled through hydrolysis-polymerization and converted the gel thin layer to an oxide by heating at relatively low temperatures.

• Journal of the Korean Wood Science and Technology
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• 제30권3호
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• pp.12-17
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• 2002

The extracellular invertase (EC 3.2.1.26) (Candida utilis) preparation was obtained from the liquid medium after desalting and freeze drying. This prepared enzyme was used for the comparative purification on 4 activated matrices by liquid column affinity chromatography method. In this method there were used controlled porous glass (CPG) silanized covalently activated by keratin, silanized silica gel and silica gel covalently covered by keratin. It was found that the invertase purification process was better using both CPG matrices (silanized CPG and keratin activated CPG) than these with two silica gel supports. Also the elution coefficient of the invertase from the two CPG columns was about 93 to 94%. Two silica gel supports found to be superior in terms of purification efficiency. The invertase purification process was confirmed by PAGE electrophoresis.

• 유기물자원화
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• 제1권1호
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• pp.115-125
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• 1993

Euglena gracilis 에서 arginine deiminas는 mitochondrial matrix 내에 존재한다. 고도로 정제된 효소가 0.23 nM의 $K_m$ 값을 갖고 효소반응을 하기 위해서는 $Co^{2+}$가 필요하며, 이때 최적 pH는 9.3~10.3이었다. Gel filtration에 의해서 얻어진 조효소 단백질의 분자량은 87,000이었으며, SDS-acrylamide gel electrophoresis에 의해 효소는 48,000의 분자량을 갖는 2개의 동일한 subunit로 구성되어 있음이 밝혀졌다. Euglena의 arginine deiminas는 sulfhydryl inhibitors에 의해서 활성이 저지되었는데, 이는 sulfhydryl group이 효소의 활성부위에 관여함을 나타낸다. 이 sulfhydryl group은 arginine이 효소와 결합하는데 있어서 negative cooperativity를 나타내었다. ${\beta}-guanidinopropionate$, ${\gamma}-guanidinobutyrate$와 guanidinosuccinate는 효소의 활성을 저지시키지 않는데 반하여, $L-^{\alpha}-amino-{\beta}-guanidino-propionate$, D-arginine, 그리고 L-homoarginine은 효소의 활성을 강력하게 저지시켰다. Citrulline과 ornithine에 의해서도 상당한 정도의 효소활성저지가 관찰되었다. 우리는 Euglena의 arginine deiminase의 독특한 성질이 Euglena 라는 원생동물 내에서 arginine 대사의 조절에 어떻게 영향을 미치는지를 토의하고자 한다.

• Current Research on Agriculture and Life Sciences
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• 제31권1호
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• pp.30-37
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• 2013

Bacillus subtilis and Bacillus amyloliquefaciens are closely related species that share a similar genomic background, and are both known to secrete large amounts of proteins directly into a medium. The extracellular proteomes of two strains of Bacillus subtilis and two strains of Bacillus amyloliquefaciens were compared by 2-D gel electrophoresis during the late exponential growth phase. The relative abundance of some minor protein spots varied among the four strains of Bacillus. Over 123 spots of extracellular proteins were visualized on the gel for B. subtilis CH 97, 68 spots for B. subtilis 3-5, 230 spots for B. amyloliquefaciens CH 51, and 60 spotsfor B. amyloliquefaciens 86-1. 2D gel electrophoresis images of the four Bacillus strains showed significantly different protein profiles. Consistent with the 2D gel electrophoretic analysis, most of the B. subtilis proteins differed from the proteases secreted by the B. amyloliquefaciensstrains. Among the proteins identified from B. subtilis, approximately 50% were cytoplasmic and 30% were canonically extracellular proteins. The secreted protein profiles for B. subtilis CH 97 and B. subtilis 3-5 were quite different, as were the profiles for B. amyloliquefaciens CH 51 and 86-1. The four proteomes also differed in the major protein composition. The B. subtilis CH 97 and B. amyloliquefaciens CH 51 proteomes both contained large amounts of secreted hydrolytic enzymes. Among the four strains, B. subtilis 3-5 secreted the least number of proteins. Therefore, even closely related bacteria in terms of genomic sequences can still have significant differences in their physiology and proteome layout.

• 한국미생물·생명공학회지
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• 제20권2호
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• pp.169-177
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• 1992

토양으로부터 alkaline protease 생성능이 강한 Streptomyces griseus HC-1141을 분리하였으며, 효소생산의 최적 배양조건은 0.5 casein, 0.05 ammonium chloride, 0.1 ferrous sulfate, 2.0의 lactose, pH 8.0에서 84시간 배양했을 때이다. 효소의 정제는 ammonium sulfate 침전, DEAE-cellulose ion exchange chromatography, Sephadex G-150 gel filtration, crystallization으로 하여 53.23배 정제할 수 있었으며 polyacrylamide gel 전기영동상 단일밴드를 나타내었다.

• 한국식품영양과학회지
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• 제21권2호
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• pp.187-194
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• 1992

Rhizopus oryzae CJ-2114의 polygalacturonase 생성을 위한 최적조건은 수분이 60% 함유된 밀기울 배지에 1% albumin, 0.2% (NH$_4$)$_2$C$_2$O$_4$, 1% sorbitol을 첨가하여 96시간 배양시 최대활성을 나타내었으며, Sep-hadex G-75 및 G-150을 사용한 gel filtration과 DEAE-cellulose에 의한 이온교환 크로마토그라피를 통하여 이 효소를 11.13배 정제할 수 있었고, 수율은 40.3% 였다. 정제효소는 polyacrylamide gel 전기 영동에 의하여 단일밴드로 확인되었으며 분자량은 SDS-polyacryl-amide 전기영동에 의하여 47,000정도로 측정되었다. 효소의 결정구조는 표면이 거친 기둥모양을 형성하고 있었으며 아미노산 조상은 17종류로써 glutamic acid 함량이 198.74mg/g enzyme로 가장 많았다.