• Bulletin of the Korean Chemical Society
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• 제34권7호
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• pp.1972-1984
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• 2013

Microtubules play an important role in intracellular transport, mobility, and particularly mitosis. Paclitaxel (Taxol$^{TM}$) and paclitaxel-like compounds have been shown to be anti-tumor agents useful for various human tumors. Paclitaxel-like compounds operate by stabilizing microtubules through interface binding at the interface between two ${\beta}$-tubulin monomers in adjacent protofilaments. In this paper we present the elucidation of the structural features of paclitaxel and paclitaxel-like compounds (e.g., epothilones) with microtubule stabilizing activities, and relate their activities to spatial and chemical features of the molecules. CATALYST program was used to generate three-dimensional quantitative structure activity relationships (3D-QSARs) resulting in 3D pharmacophore models of epothilone- and paclitaxel-derivatives. Pharmacophore models were generated from diverse conformers of these compounds resulting in a high correlation between experimental and predicted biological activities (r = 0.83 and 0.91 for epothilone and paclitaxel derivatives, respectively). On the basis of biological activities of the training sets, five- and four-feature pharmacophore hypotheses were generated in the epothilone and paclitaxel series. The validation of generated hypotheses was achieved by using twelve epothilones and ten paclitaxels, respectively, which are not in the training sets. The clustering (grouping) and merging techniques were used in order to supplement spatial restrictions of each of hypothesis and to develop more comprehensive models. This approach may be of use in developing novel inhibitor candidates as well as contributing a better understanding of structural characters of many compounds useful as anticancer agents targeting microtubules.

• 디지털융복합연구
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• 제15권11호
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• pp.231-243
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• 2017

본 논문은 전기적 감지 방식 바이오센서의 개념을 리뷰하고, 의류 및 텍스트 기반의 바이오센서의 연구 사례를 조사하였다. 생체 신호를 측정 할 수 있는 바이오센서는 생물학적 감지 물질을 이용하여 생물학적 물질의 물리적, 화학적 특성을 감지하는 장치이다. 따라서 바이오센서를 사용하여 생체신호를 측정할 수 있는 웰니스 의류는 U-Health 서비스를 제공하는데 중요한 역할을 한다. 기존 센서와 다르게 바이오센서의 차별화된 특징은 선택적 반응과 생물학적 물질의 결합을 사용한다는 점이다. 이러한 바이오센서 중 전기적 감지 바이오센서는 전기 신호의 처리로 인해 크기가 매우 작아 유비쿼터스 환경을 조성하는데 이용될 수 있다. 따라서 웰니스 의류를 개발하기 위해 소형화가 쉬운 전기적 감지 바이오센서를 연구할 필요가 있다. 본 논문에서는 전기적 감지 바이오센서(전기화학적 방식, 나노와이어/탄소나노튜브 기반 FET 방식)에 대해 자세히 기술하였다. 마지막으로, 이러한 고찰을 통해 향후 웰니스 의류에 적용 가능할 바이오센서의 기술개발 방향을 제언하였다.

• Journal of Oral Medicine and Pain
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• 제21권1호
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• pp.141-152
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• 1996

Oral Lichen Planus(OLP) is a idiopathic chronic inflammatory disease with more difficult to clear and higher recurrent rate than cutaneous lesions. But, there has been no estabilished theories about the proper treatment for OLP. The purpose of this study is to examine the clinical feature, relationship with systemic disease and dental treatment of OLP patients of Korea and to gain helpful information about clinical characteristics and treatment of OLP. The subjects chosen for the study were 54 patients who had visited Department of Oral Diagnosis & Oral Medicine at Yonsei University Dental Hospital Dental Hospital and diagnosed as OLP. Previous clinical records has been reviewed and questionnaires, oral examination, laboratory examination were done and recorded. The following results were obtained : 1. Of the 54 patients, 21 were men and 33 were women with an average age of 47.8 years. 2. The most common intraoral site was bilateral buccal mucosa, followed by unilateral buccal mucosa, gingiva, vesibule, lip mucosa, glossal mucosa, palatal mucosa and mouth floor. 3. The mixed, erosive and reticular form of OLP was most frequent(83.3%) clinical form. 4. OLP patients with liver disease were 5, and drug medication patients were 7. But, we could not find its evidence of association with OLP. 5. Associated events on onset of symptom were stress, denture wearing, dental treatemtn, and common cold. 6. Associated symptoms were dry mouth, tingling, sore throat, and altered taste perception. 30.8% of patients had no specific associated symptoms. 7. Aggravating factors of symptom were peppery food, hot food, fatigue, toothpaste, salty food, sour food, tension, and conversation. Reducing factors were cold food, sleeping. 69.2% of patients had no specific reducing factors. 8. There were no significant differences between normal papulation and OLP patients in CBC, SGOT< SGPT, Serum iron, Total iron binding capacity. 66.7% of subjects were positive response to fungus study for Candida Albicans. The incidence of stress and dental treatment on onset of symptom appeared high in OLP patients. Especially, high incidence of positive response to fungus study for Candida albicans, prescription of anti-fungal agents and dental treatment considerations may be helpful to treatment of OLP.

• 대한의용생체공학회:의공학회지
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• 제29권6호
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• pp.477-483
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• 2008

The observations of difference and similarity in brain activities involved in processing different languages have fundamental importance in cognitive neuroscience. The purpose of this study was to investigate the difference and similarity in temporal brain activation patterns due to the language difference during visual perception of Korean and English words under priming. Especially, we tried to find the difference in evoked spectral power in gamma-band, which is known to reflect feature binding. The stimulation was visually presented as word pairs belonging to same or different categories so that N400 event-related potential(ERP) was evoked. Average ERP analysis and spectral analysis of gamma-band activity(GBA) were performed on 12 normal Korean subjects. Several ERP components such as P1, N1, N400, and P600 could be identified consistently, and the differences in N1, N400, and P600 were observed. From the spectral analysis, we found that the evoked GBA(eGBA) was significantly larger for English at ${\sim}100$ ms poststimulus. The latency of the eGBA was also considerably delayed for English. Overall, the results on the ERP components and eGBA analyses seem to be commensurate with subjects' familiarity of each language, and the difficulty of perceiving words of each language. The methods of this study can also be applied for clinical purposes considering that the language-related processing can be greatly altered for the patients with neurological or psychiatric diseases.

• Journal of Ginseng Research
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• 제38권4호
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• pp.233-238
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• 2014

Background: The actin cytoskeleton in podocytes is essential for the maintenance of its normal structure and function. Its disruption is a feature of podocyte foot-process effacement and is associated with proteinuria. ${\alpha}$-Actinin-4 in podocytes serves as a linker protein binding the actin filaments of the cytoskeleton. Methods: To investigate the effect of ginseng total saponin (GTS) on the pathological changes of podocyte ${\alpha}$-actinin-4 induced by diabetic conditions, we cultured mouse podocytes under normal glucose (5mM) or high glucose (HG, 30mM) conditions, with or without the addition of advanced glycosylation end products (AGE), and treated with GTS. Results: In confocal imaging, ${\alpha}$-actinin-4 colocalized with the ends of F-actin fibers in cytoplasm, but diabetic conditions disrupted F-actin fibers and concentrated ${\alpha}$-actinin-4 molecules at the peripheral cytoplasm. GTS upregulated ${\alpha}$-actinin protein in a time- and dose-dependent manner, and suppressed the receptor for AGE levels in western blotting. Diabetic conditions, including HG, AGE, and both together, decreased cellular ${\alpha}$-actinin-4 protein levels at 24 h and 48 h. Such quantitative and qualitative changes of ${\alpha}$-actinin-4 protein induced by diabetic conditions were mitigated by GTS. Conclusion: These findings imply that both HG and AGE have an influence on the distribution and amount of ${\alpha}$-actinin-4 in podocytes that can be recovered by GTS.

• 한국농촌건축학회논문집
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• 제10권1호
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• pp.101-109
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• 2008

It is very hard to find out Tongbanga-millhouse installed nearby a streamlet to use water with Tongbanga(a kind of water-mill) to polish cereals by pounding like a visage of its old days. It plays an important part in folkloric, architectural and educational aspects. The purpose of this study is to analyse the architectural features of Tongbanga and millhouse itself so that to find the way how to build and fabricate the materials and frame members. Therefore this study has been focused on the composition principle and fabrication method of Tongbanga-millhouse on the side of architecture. The fabrication methods of its house in accordance with regular sequences are as follows. ${\cdot}$ Firstly the decision of location of Tongbanga-millhouse and Hwak(a big mortar made of stone). ${\cdot}$ Slantly three rafter installation at an angle of $50^{\circ}$ to err on the safe side and then slantly fifteen rafter installation making a circular cone shape. ${\cdot}$ Installation of twigs to be circles from bottom to top. ${\cdot}$ Manifoldly covering of trunks peeling the barks from flax plants. ${\cdot}$ Threefoldly thatching with upside barks of oak trees. ${\cdot}$ Placing woods alike rafter on the bark thatches as a weight not to fly away by wind. ${\cdot}$ Binding woods alike rafter with vines of arrowroots to maintain the proper place. The decayed Tongbanga-millhouse by means of upper ways was restored out of all recognition.

• 정보처리학회논문지:소프트웨어 및 데이터공학
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• 제8권10호
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• pp.421-426
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• 2019

본 논문에서는 단백질 복합체에서 단백질 사이의 접촉 영역이 갖는 기하학적 특징을 가시화하는 방법을 제안한다. 단백질 또는 리간드가 요철이 있는 곡면으로 표현될 때, 두 곡면이 서로 접하면서 교차하지 않는 성질을 형태 상보성이라 한다. 단백질-단백질 또는 단백질-리간드 도킹 연구에서 형태 상보성과 화학적인 성질, 엔트로피 등이 접촉 영역의 발견에 중요한 역할을 한다는 것을 볼 수 있다. 일반적으로 형태 상보성이 높은 영역을 발견한 뒤, 이 영역에 속한 아미노산들의 잔기 극성 및 소수성 등을 이용하여 접촉 영역을 예측한다. 접촉 영역을 예측하기 위한 연구에서는 기존에 알려진 복합체에서 접촉 영역이 갖는 기하학적인 특징을 조사하는 작업이 필요하며, 이를 위해 기하학적인 특징을 가시화하는 작업은 필수적이다. 본 논문에서는 단백질 복합체에서 접촉 영역을 발견하고, 두 개의 단백질 각각의 접촉 면에 속한 근거리의 정점들의 기하학적인 특징을 법선 벡터 및 평균 곡률로써 가시화하는 방법을 제안한다.

• Journal of Microbiology and Biotechnology
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• 제29권2호
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• pp.235-243
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• 2019

A special eosinophilic agarase exo-type ${\beta}$-agarase gene, AgaDL6, was cloned from a marine agar-degrading bacterium, Flammeovirga sp. HQM9. The gene comprised 1,383-bp nucleotides encoding a putative agarase AgaDL6 of 461 amino acids with a calculated molecular mass of 52.8 kDa. Sequence analysis revealed a ${\beta}$-agarase domain that belongs to the glycoside hydrolase family (GH) 16 and a carbohydrate-binding module (CBM_4_9) unique to agarases. AgaDL6 was heterologously expressed in Escherichia coli BL21 (DE3). Enzyme activity analysis of the purified protein showed that the optimal temperature and pH of AgaDL6 were $50^{\circ}C$ and 3.0, respectively. AgaDL6 showed thermal stability by retaining more than 98% of activity after incubation for 2 h at $50^{\circ}C$, a feature quite different from other agarases. AgaDL6 also exhibited outstanding acid stability, retaining 100% of activity after incubation for 24 h at pH 2.0 to 5.0, a property distinct from other agarases. This is the first agarase characterized to have such high acid stability. In addition, we observed no obvious stimulation or inhibition of AgaDL6 in the presence of various metal ions and denaturants. AgaDL6 is an exo-type ${\beta}$-1,4 agarase that cleaved agarose into neoagarotetraose and neoagarohexaose as the final products. These characteristics make AgaDL6 a potentially valuable enzyme in the cosmetic, food, and pharmaceutical industries.

• 한국정보통신학회:학술대회논문집
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• 한국정보통신학회 2014년도 추계학술대회
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• pp.620-623
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• 2014

차량은 빠르게 변하는 속도와 도로의 상황에 따라 속도가 변하는 특성을 가지고 있기 때문에 이들 간의 통신을 위한 네트워크 구성도 빠르게 변한다. 이러한 특성 때문에 차량 네트워크 (Vehicular Ad-hoc Network: VANET)에서 신뢰성 있는 라우팅을 적용하는 것이 쉽지 않다. VANET 환경에서 신뢰성 있는 라우팅을 적용하기 위한 방법에 하나로 클러스터링 기법이 있다. 클러스터링이란 클러스터 헤드(Cluster Head : CH)를 중심으로 차량들을 그룹으로 묶어 통신 및 관리하는 것이다. 따라서 클러스터 내의 어떤 노드(차량)를 클러스터 헤드로 선택하는가에 따라 해당 클러스터링의 오버헤드 감소와 네트워크의 안정성 및 효율성이 좌우된다. 본 논문은 기존의 클러스터링 알고리즘들과 달리 도로 기반 시설인 RSU(Road Side Unit)를 활용하는 클러스터 헤드 선택 알고리즘을 소개한다. RSU를 통한 노드들의 속도와 거리 계산 값으로 클러스터 헤드 우선순위를 결정함으로써 기존의 알고리즘들 보다 안정적이고 효율적인 클러스터링 알고리즘을 제안한다.

• BMB Reports
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• 제54권11호
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• pp.557-562
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• 2021

Microglial activation is closely associated with neuroinflammatory pathologies. The nucleotide-binding and oligomerization domain-like receptor containing a pyrin domain 3 (NLRP3) inflammasomes are highly organized intracellular sensors of neuronal alarm signaling. NLRP3 inflammasomes activate nuclear factor kappa-B (NF-κB) and reactive oxygen species (ROS), which induce inflammatory responses. Moreover, NLRP3 dysfunction is a common feature of chronic inflammatory diseases. The present study investigated the effect of a novel thiazol derivative, N-cyclooctyl-5-methylthiazol-2-amine hydrobromide (KHG26700), on inflammatory responses in lipopolysaccharide (LPS)-treated BV-2 microglial cells. KHG26700 significantly attenuated the expression of several pro-inflammatory cytokines, including tumor necrosis factor-α, interleukin-1β, and interleukin-6, in these cells, as well as the LPS-induced increases in NLRP3, NF-κB, and phospho-IkBα levels. KHG26700 also suppressed the LPS-induced increases in protein levels of autophagy protein 5 (ATG5), microtubule-associated protein 1 light chain 3 (LC3), and beclin-1, as well as downregulating the LPS-enhanced levels of ROS, lipid peroxidation, and nitric oxide. These results suggest that the anti-inflammatory effects of KHG26700 may be due, at least in part, to the regulation of the NLRP3-mediated signaling pathway during microglial activation.