• Title/Summary/Keyword: fMRI (functional magnetic resonance imaging)

Search Result 145, Processing Time 0.02 seconds

Data Visualization using Linear and Non-linear Dimensionality Reduction Methods

  • Kim, Junsuk;Youn, Joosang
    • Journal of the Korea Society of Computer and Information
    • /
    • v.23 no.12
    • /
    • pp.21-26
    • /
    • 2018
  • As the large amount of data can be efficiently stored, the methods extracting meaningful features from big data has become important. Especially, the techniques of converting high- to low-dimensional data are crucial for the 'Data visualization'. In this study, principal component analysis (PCA; linear dimensionality reduction technique) and Isomap (non-linear dimensionality reduction technique) are introduced and applied to neural big data obtained by the functional magnetic resonance imaging (fMRI). First, we investigate how much the physical properties of stimuli are maintained after the dimensionality reduction processes. We moreover compared the amount of residual variance to quantitatively compare the amount of information that was not explained. As result, the dimensionality reduction using Isomap contains more information than the principal component analysis. Our results demonstrate that it is necessary to consider not only linear but also nonlinear characteristics in the big data analysis.

Quantitative Evaluation of the Corticospinal Tract Segmented by Using Co-registered Functional MRI and Diffusion Tensor Tractography (정상인에서 기능적 뇌 자기공명영상과 확산텐서영상 합성기법을 이용한 피질척수로의 위치에 따른 정량적 분석)

  • Jang, Sung-Ho;Hong, Ji-Heon;Byun, Woo-Mok;Hwang, Chang-Ho;Yang, Dong-Seok
    • Investigative Magnetic Resonance Imaging
    • /
    • v.13 no.1
    • /
    • pp.40-46
    • /
    • 2009
  • Purpose : The purpose of this study was to investigate the quantitative evaluation of the corticospinal tract (CST) at the multiple levels by using functional MRI (fMRI) co-registered to diffusion tensor tractography (DTT). Materials and Methods : Ten normal subjects without any history of neurological disorder participated in this study. fMRI was performed at 1.5 T MR scanner using hand grasp-release movement paradigm. DTT was performed by using DtiStudio on the basis of fiber assignment continuous tracking algorithm (FACT). The seed region of interest (ROI) was drawn in the area of maximum fMRI activation during the motor task of hand grasp-release movement on a 2-D fractional anisotropy (FA) color map, and the target ROI was drawn in the cortiocospinal portion of anterior lower pons. We have drawn five ROIs for the measurement of FA and apparent diffusion coefficient (ADC) along the corona radiata (CR) down to the medulla. Results : The contralateral primary sensorimotor cortex (SM1) was mainly found to be activated in all subjects. DTT showed that tracts originated from SM1 and ran to the medulla along the known pathway of the CST. In all subjects, FA values of the CST were higher at the level of the midbrain and posterior limb of internal capsule (PLIC) than the level of others. Conclusion : Our study showed that co-registered fMRI and DTT has elucidated the state of CST on 3-D and analyzed the quantitative values of FA and ADC at the multiple levels. We conclude that co-registered fMRI and DTT may be applied as a useful tool for clarifying and investigating the state of CST in the patients with brain injury.

  • PDF

Changes of Motor Deactivation Regions in Patients with Intracranial Lesions

  • Lee, Seung Hwan;Koh, Jun Seok;Ryu, Chang-Woo;Jahng, Geon Ho
    • Journal of Korean Neurosurgical Society
    • /
    • v.54 no.6
    • /
    • pp.453-460
    • /
    • 2013
  • Objective : There is a rich literature confirming the default mode network found compatible with task-induced deactivation regions in normal subjects, but few investigations of alterations of the motor deactivation in patients with intracranial lesions. Therefore, we hypothesized that an intracranial lesion results in abnormal changes in a task-induced deactivation region compared with default mode network, and these changes are associated with specific attributes of allocated regions. Methods : Blood oxygenation level dependent (BOLD) functional magnetic resonance imaging (fMRI) during a motor task were obtained from 27 intracranial lesion patients (mean age, 57.3 years; range 15-78 years) who had various kinds of brain tumors. The BOLD fMRI data for each patient were evaluated to obtain activation or deactivation regions. The distinctive deactivation regions from intracranial lesion patients were evaluated by comparing to the literature reports. Results : There were additive deactivated regions according to intracranial lesions : fusiform gyrus in cavernous hemangioma; lateral occipital gyrus in meningioma; crus cerebri in hemangiopericytoma; globus pallidus, lateral occipital gyrus, caudate nucleus, fusiform gyrus, lingual gyrus, claustrum, substantia nigra, subthalamic nucleus in GBM; fusiform gyrus in metastatic brain tumors. Conclusion : There is increasing interest in human brain function using fMRI. The authors report the brain function migrations and changes that occur in patients with intracranial lesions.

Acupuncture Analgesia : A Sensory Stimulus Induced Analgesia Observed by functional Magnetic Resonance Imaging (침의 진통효과: 체성감각신경자극으로 유도된 진통작용에 대한 기능성자기공명영상장치를 이용한 연구)

  • Cho, Zang-hee;Hwang, Seon-chool;Son, Young-don;Kang, Chang-ki;Wong, Edward K.;Bai, Sun-joon;Lee, Un-jung;Sung, Kang-kyung;Park, Tae-seok;Kim, Young-bo;Min, Hoon-ki;Oleson, Terry
    • Journal of Acupuncture Research
    • /
    • v.21 no.2
    • /
    • pp.57-71
    • /
    • 2004
  • Objective : Physiological evidence regarding acupuncture's effect in human patients is not yet well established, despite considerable evidence for its therapeutic efficacy. Besides target or disease specificity of acupuncture, acupuncture analgesia (AA) appears to be another large subclass that poses many questions, such as whether there is point specificity with respect to which acupoint is most effective for a particular condition. Methods : We observed brain activation with functional magnetic resonance imaging (fMRI) using a set of stimuli that consist of pain, pain following Meridian acupuncture, and pain following Sham acupuncture. Results : Among the new observations, the most interesting fact is that data sets of both Meridian acupuncture and Sham acupuncture show decreased activation of the same brain areas related to the pain processing signals. Present functional MRI study demonstrate two important biological observations that could elucidate AA mechanism in human participants: the effects of acupuncture occur through mediation of the higher brain areas. Sham acupuncture stimulation appears to be almost as effective as traditional Meridian acupoint stimulation, suggesting that acupuncture is not entirely point specific. Decreased activation in the limbic paleo cortical areas appears to be the probable neurological manifestation of AA and strongly implies that acupuncture stimulation inhibits the transmission of ascending pain signals to the higher cortical areas by the previously known descending pain inhibitory circuit. Conclusion : We, therefore, a hypothesized that this pain inhibitory circuit is initiated and mediated via the broad sense Hypothalamus Pituitary Adrenal (BS HPA) axis in conjunction to the "sensory stimulation."

  • PDF

Cerebellar Activation Related to Various Tasks Using fMRI (다양한 임무 부여시 기능적 자기공명영상에서 관찰된 소뇌의 활성화)

  • Hwang, Seung-Bae;Kwak, Hyo-Sung;Lee, Sang-Yong;Jin, Gong-Yong;Han, Young-Min;Kim, Young-Kon;Chung, Gyung-Ho
    • Investigative Magnetic Resonance Imaging
    • /
    • v.13 no.1
    • /
    • pp.47-53
    • /
    • 2009
  • Purpose : Although it's been known for half a century that unique structures have evolved in the cerebellum and they then became greatly enlarged in the human brain, the function of these structures still remains unknown. The purpose of this study was to assess cerebellar activation during motor, sensory, word generation, listening comprehension, and working memory tasks with using functional magnetic resonance imaging (fMRI). Materials and Methods : Eleven healthy right-handed subjects (Male: female, 6:5, mean age: 27.4years) were imaged on a Siemens 1.5T scanner. Whole brain functional maps were acquired using BOLD EPI sequences in the axial plane. Each paradigm consisted of five epochs of activation vs. the control condition. The activation tasks consisted of left finger complex movement, sensory stimulation of the left hand, word generation, listening comprehension, and working memory tasks. The reference function was a boxcar waveform. The activation maps were thresholded at p = 0.001. SPM 5 evaluated the activated areas and responses within the cerebellum. Results : Cerebellar activation was observed on motor task, word generation task, and working memory task. There were 949 activated areas and the mean fitted and adjusted response was 0.68 during the motor task. There were 319 activated areas and the mean fitted and adjusted response was 0.15 during the word generation task. There were 330 activated areas and the mean fitted and adjusted response was 0.26 during the working memory task. Conclusion : Our results suggest that the cerebellum is involved in a variety of functional tasks, including motor, word generation, and working memory tasks. However, during the motor task, the cerebellum showed a large activated area and a high response. Cerebellar function can be evaluated by fMRI.

  • PDF

Reorganization of Motor Network and the Effect of Cross Education Derived From Unilateral Coordination Training (편측 협응훈련에 의한 운동신경망의 재조직 및 교차훈련의 효과 -사례연구-)

  • Park, Ji-Won;Kim, Jong-Man;Seo, Jeong-Hwan;Kim, Yun-Hee
    • Physical Therapy Korea
    • /
    • v.9 no.3
    • /
    • pp.67-76
    • /
    • 2002
  • We report the reorganization of motor network resulted from intensive unilateral coordination training and the effect of cross education on the untrained side in patient with traumatic brain injury using functional magnetic resonance imaging (fMRI). A 22 year-old male patient who had suffered from diffuse axonal injury for 58 months showed coordination deficit in the left hand at initial examination. Intensive motor training including complex finger movements and coordination activities using a metronome was introduced to the patient 4 hours per day for a week. FMRI was performed on a 3T ISOL Forte scanner. All functional images were analyzed using SPM-99 software. Hand function was improved after training not only in the trained left hand, but also in the untrained right hand. There was no activation in the right primary motor area (M1) during left hand movement before training whereas robust activation of left M1 was demonstrated by the right hand movement. Profuse activation of bilateral prefrontal lobes was seen during both hand movements before training. After training of left hand, right M1 became prominently activated during the left hand motion. The activation of bilateral prefrontal lobes disappeared after training not only for the left hand movement but also for the right, which clearly demonstrated the effect of cross education. This case report demonstrated the learning-dependent reorganization of the M1 and the effect of cross education.

  • PDF

The Differences of Visuospatial Cognitive Performance and Cerebral Activation and Lateralization between 20s and 40s (20대와 40대의 공간 인지 능력, 대뇌 활성화 및 대뇌 편측화의 차이)

  • Chung Soon Cheol;Kim Yun Sung;You Ji Hye;Tack Gye Rae;Lee Bongsoo;Yi Jeong Han;Sohn Jin Hun
    • Journal of the Korean Society for Precision Engineering
    • /
    • v.23 no.1 s.178
    • /
    • pp.209-215
    • /
    • 2006
  • The present study purposed to examine differences between 20s and 40s in visuospatial performance, the number of activated yokels and cerebral lateralization using functional Magnetic Resonance Imaging (fMRI). For this study, eight college students in their twenties (21.5 years on the average) and six adults in their forties (45.7 years on the average) participated in the experiment. Functional brain images were taken from 37 MRI using the single-shot EPI method. Compared to the twenties the forties showed lower visuospatial performance and longer reaction time. In addition, compared to the twenties the forties had a smaller number of activated yokels and less cerebral lateralization. The results of this study show that people's visuospatial performance and number of activated yokels decrease with aging. In addition, they also suggest that cerebral lateralization decreases in order to supplement the lowering of visuospatial performance, which in turn symmetrizes the activation of the left and right hemisphere.

Altered patterns of brain activity during transient anger among young males with alcohol use disorders: A preliminary study

  • Park, Mi-Sook;Sohn, Sunju;Seok, Ji-Woo;Kim, Eun-Hye;Sohn, Jin-Hun
    • Science of Emotion and Sensibility
    • /
    • v.18 no.2
    • /
    • pp.55-64
    • /
    • 2015
  • The aim of the study was to investigate the neural substrates associated with processing anger among young males with alcohol use disorders (AUDs) using functional magnetic resonance imaging (fMRI). Eighteen individuals with AUD and 15 demographically similar non-abusers participated in the study. Participants were scanned on their brain functioning while they viewed an audio-visual film clip that was previously designed specifically to induce anger emotion, followed by anpsychological assessment. Greater brain activities were detected in the left inferior frontal gyrus (IFG) and dorsal anterior cingulate cortex (dACC) among subjects with AUD compared to the controls during the exposure to anger-provoking stimuli. Despite the same level of subjective anger during anger induction, the greater activations both in the IFG and dACC regions may suggestthat individuals with AUD have a greater propensity to undergo cognitive control and self-regulation while experiencing anger.

Relations of multilingual's L1, L2, L3 lexical processing and cerebral activation areas in fMRI (fMRI에 반영된 다중언어화자의 L1, L2, L3 어휘 정보처리 특성과 대뇌 활성화 영역의 관련성)

  • Nam Kichun;Lee Donghoon;Oh Hyun-Gum;Ryu Jaeook
    • Proceedings of the Acoustical Society of Korea Conference
    • /
    • spring
    • /
    • pp.313-316
    • /
    • 2002
  • 본 연구에서는 기능적 자기공명 영상법(functional magnetic resonance imaging)을 이용하여, 한국어, 일어, 프랑스어, 영어 등 여러 언어를 구사할 수 있는 다중언어화자들을 대상으로 각 언어에 따른 대뇌 언어처리 과정을 알아보고, 그 처리과정이 해당언어의 유창성, 습득시기에 따라 어떻게 달라지는지를 알아보았다. 실험 결과, 언어처리에 있어 핵심적인 역할을 하는 것으로 보고되는 Broca 영역은 언어의 이해와 산출 과정에 모두 관계된 것으로 보이며, 언어의 산출과정에는 언어의 이해과정에 관계되는 영역외에 조음과정에 따른 영역의 활성화가 보고되었다. 또한 언어습득시기와 유창성에 따른 각 언어의 활성화를 살펴보면, 유창성이 높을수록 대뇌 활성화는 줄어들며, 유창성이 낮은 언어조건에서는 언어처리 영역의 활성화 수준이 높아지며 또한 우반구 및 전전두회(prefrontal gyrus)의 활성화가 높아지는 것이 보인다.

  • PDF

Classifying Instantaneous Cognitive States from fMRI using Discriminant based Feature Selection and Adaboost

  • Vu, Tien Duong;Yang, Hyung-Jeong;Do, Luu Ngoc;Thieu, Thao Nguyen
    • Smart Media Journal
    • /
    • v.5 no.1
    • /
    • pp.30-37
    • /
    • 2016
  • In recent decades, the study of human brain function has dramatically increased thanks to the advent of Functional Magnetic Resonance Imaging. This is a powerful tool which provides a deep view of the activities of the brain. From fMRI data, the neuroscientists analyze which parts of the brain have responsibility for a particular action and finding the common pattern representing each state involved in these tasks. This is one of the most challenges in neuroscience area because of noisy, sparsity of data as well as the differences of anatomical brain structure of each person. In this paper, we propose the use of appropriate discriminant methods, such as Fisher Discriminant Ratio and hypothesis testing, together with strong boosting ability of Adaboost classifier. We prove that discriminant methods are effective in classifying cognitive states. The experiment results show significant better accuracy than previous works. We also show that it is possible to train a successful classifier without prior anatomical knowledge and use only a small number of features.