• Title/Summary/Keyword: endemic species

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Reproduction Study of Korean Endemic Species Acheilognathus koreensis (고유종 칼납자루의 재생산 기초 연구)

  • Kim, Chi-Hong;Lee, Wan-Ok;Lee, Jong-Ha;Beak, Jae-Min
    • Korean Journal of Ichthyology
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    • v.23 no.2
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    • pp.150-157
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    • 2011
  • In this study we described reproduction study of Korean endemic species, Acheilognathus koreensis and three other acheilognathinae species A. signifer, Rhodeus pseudosericeus, and R. uyekii. Morphology of egg shape and larvae just hatched is unique by the species respectively. There is no interrelation factor between size of female and number of spawned eggs per one time. Minium water temperature for spawning of A. koreensis was observed in $13.0^{\circ}C$ having low hatching rate with 43.5 percent. The egg of A. koreensis began to hatch approximately 79 hours after insemination. As higher as water temperature until $22.0^{\circ}C$ hatching elapsed time for developing eggs of A. koreensis and three species in this study was shortened. A. koreensis was grew up to be a adult enough which can be join to new production for three hundred days after hatching with 52.4 mm in total length. This reproduction study will be applied to preservation of Korean endemic fresh water fishes basically.

Analysis of genetic differentiation and population structure of the Korean-peninsula-endemic genus, Semisulcospira, using mitochondrial markers

  • Eun-Mi Kim;Yeon Jung Park;Hye Min Lee;Eun Soo Noh;Jung-Ha Kang;Bo-Hye Nam;Young-Ok Kim;Tae-Jin Choi
    • Fisheries and Aquatic Sciences
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    • v.25 no.12
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    • pp.601-618
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    • 2022
  • The genus Semisulcospira is an economically and ecologically valuable freshwater resource. Among the species, Semisulcospira coreana, Semisulcospira forticosta and Semisulcospira tegulata are endemic to the Korean peninsula and Semisulcospira gottschei is widespread in Asia. Therefore, maintenance and conservation of wild populations of these snails are important. We investigated the genetic diversity and population structure of Semisulcospira based on the mitochondrial cytochrome c oxidase subunit I (COI), NADH dehydrogenase subunit 4 (ND4), and combined mitochondrial DNA (COI + ND4) sequences. All four species and various genetic makers showed a high level of haplotype diversity and a low level of nucleotide diversity. In addition, Fu's Fs and Tajima's D neutrality tests were performed to assess the variation in size among populations. Neutrality tests of the four species yielded negative Fu's Fs and Tajima's D values, except for populations with one haplotype. The minimum spanning network indicated a common haplotype for populations of S. coreana, S. tegulata and S. gottschei, whereas S. forticosta had a rare haplotype. Also, genetic differences and gene flows between populations were assessed by analysis of molecular variance and using the pairwise fixation index. Our findings provided insight into the degree of preservation of the species' genetic diversity and could be utilized to enhance the management of endemic species.

A report of the second chloroplast genome sequence in Veronica nakaiana (Plantaginaceae), an endemic species in Korea

  • LEE, Yae-Eun;LEE, Yoonkyung;KIM, Sangtae
    • Korean Journal of Plant Taxonomy
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    • v.51 no.1
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    • pp.109-114
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    • 2021
  • Veronica nakaiana Ohwi (Plantaginaceae) is an endemic taxon on Ulleungdo Island, Korea. We report the second complete chloroplast genome sequence of V. nakaiana. Its genome size is 152,319 bp in length, comprising a large single-copy of 83,195 bp, a small single-copy of 17,702 bp, and a pair of inverted repeat regions of 25,711 bp. The complete genome contains 115 genes, including 51 protein-coding genes, four rRNA genes, and 31 tRNA genes. When comparing the two chloroplast genomes of V. nakaiana, 11 variable sites are recognized: seven SNPs and four indels. Two substitutions in the coding regions are recognized: rpoC2 (synonymous substitution) and rpl22 (nonsynonymous substitution). In nine noncoding regions, one is in the tRNA gene (trnK-UUU), one is in the intron of atpF, and seven are in the intergenic spacers (trnH-GUG~psbA, trnK-UUU, rps16~trnQ-UUG, trnC-GCA~petN, psbZ~trnG-GCC, ycf3~trnS-GGA, ycf4~cemA, and psbB~psbT). The data provide the level of genetic variation in V. nakaiana. This result will be a useful resource to formulate conservation strategies for V. nakaiana, which is a rare endemic species in Korea.

Holomorph and Phylogeny of Erysiphe chloranthi on Chloranthus japonicus in Korea

  • In-Young Choi;Lamiya Abasova;Byoung-Ki Choi;Ji-Hyun Park;Hyeon-Dong Shin
    • The Korean Journal of Mycology
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    • v.51 no.4
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    • pp.405-410
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    • 2023
  • Erysiphe chloranthi is the only powdery mildew species (Erysiphaceae) found on Chloranthus plants belonging to the family Chloranthaceae. This species has long been known to be present in Japan and Korea and is hence regarded as endemic to East Asia. Examination of seven Korean specimens revealed detailed morphological characteristics of the holomorph of this species. Short foot-cells of conidiophores are proposed as key characteristics that differ from related species. Sequences of the internal transcribed spacer regions and large subunit gene retrieved from four Korean samples confirm the phylogenetic position of this species within the Erysiphe aquilegiae complex. These data may help elucidate the identity of this species and clarify the ambiguity of the E. aquilegiae complex.

Genetic Diversity and Structure of a Rare and Endemic, Spring Ephemeral Plant Corydalis filistipes Nakai of Ullung Island in Korea (울릉도 희귀.특산 식물 섬현호색의 유전적 다양성과 구조)

  • Kim, Jin-Seok;Yang, Byeong-Hoon;Chung, Jae-Min;Lee, Byeong-Cheon;Lee, Jae-Cheon
    • Journal of Ecology and Environment
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    • v.29 no.3
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    • pp.247-252
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    • 2006
  • For the spring ephemeral and myrmecochorous perennia, Corydalis filistipes Nakai (Fumariaceae), rare and narrow endemic to Ullung Island in Korea, genetic diversity and structure of 4 subpopulations of the species were investigated with allozyme markers. Levels of genetic diversity (A=1.73, $P_{95%}$=61..2%, Ho=0.201, He=0.167) were relatively lower than those of other endemic species with widespread distribution range, but considerably higher than other endemic species with similar life history traits isolated in island. The moderate level of genetic diversity within subpopulations in C. filistipes is characteristic of the species with predominantly outcrossing, myrmecochorous seed dispersal by dual function of the elaisome and mode of sexual and asexual reproduction by the cleistogamy. The analysis of fixation indices showed an overall excess of heterozygotes (mean $F_{IS}=-0.1889,\;F_{IT}=-0.1226$) relative to H-W expectations. About 5.6% of the total genetic variation was found among subpopulations ($F_{ST}$=0.0557). The strategies of reasonable conservation and management, and the maintenance mechanism of genetic diversity of Corydalis filistipes Nakai, endemic plant species in Korea were discussed.

Vascular Plant Diversity of Jeju Island, Korea

  • Kim, Chan-Soo
    • Korean Journal of Plant Resources
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    • v.22 no.6
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    • pp.558-570
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    • 2009
  • The vascular plants in Jeju composed of 21 families 62 genera, 190 species, 7 varieties with 197 taxa in Pteridophyta, 3 families 5 genera, 7 species, 3 forma with 10 taxa in gymnosperm (Coniferophyta) and 143 families 703 genera, 1,622 species, 114 varieties and 47 forma with 1,783 taxa in Endospermae. The total number of taxa was 1,990 consisting 167 families, 770 genera, 1,818 species, 121 varieties and 50 forma. Three families, 4 genera 4 species and 1 variety in Pteridophyta and 1 family, 1 genus I species, 1 forma of Coniferophyta were endemic to Jeju. Five families, 8 genera and 8 species in the Monocotyledonae of Endospermae and 23 families, 32 genera, 21 species, 16 varieties and 7 forma and 44 taxa in Cholipetalae, and 9 families, 24 genera, 12 species, 13 varieties and 7 forma, total 32 taxa in Sympetalae were endemic to Jeju. Total 90 taxa with 41 families, 69 genera, 46 species, 29 varieties and 15 forma were drawn up as endemic plants in Jeju. As the numbers show on, Jeju has more biodiversity especially plant diversity than any other places in Korea. It was an important region in regard to geographical position. The rarity on plants from Jeju has been assessed based on the IUCN red list categories and criteria at both regional and global levels. There was one species in each extinct (EX) and extinct in the Wild (EW). The EX and EW species were Rhododendron saisiuense Nakai (Ericaceae) and Asplenium antiquum Makino (Aspleniaceae), respectively. Three taxa, Rhododendron dauricum L. (Ericaceae), Lycopodium sieboldii Miq., and Lycopodiella cernua (L.) Serm (Lycopodiaceae) were species that is extinct in the region (RE). Sixty-one taxa were critically endangered (CR), 13 were endangered (EN), and 83 were vulnerable (VU) at regional level. The taxa listed on a Red List corresponds 26.9% of total taxa in Jeju. At global level, there were 19 taxa in CR, 4 in EN, and 1 in VU (Vulnerable) as the category of threat. The rest taxa (133 taxa) were classified as Least Concern (LC). According to the results of the assessment, conservation measures must be taken for total of 157 species that were categorized in threaten including one of EX, one of EW and three extinct in the region immediately. Of 157 species, 61 were CR, 13 are EN and 83 were VU.

Zoogeographic Analysis on the Subfamily Tryphoninae (Hymenoptera:Ichneumonidae) (뭉툭맵시벌아과(벌목:맵시벌과)의 동물지리학적 분석)

  • 차진열;이종욱;권용정
    • Korean journal of applied entomology
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    • v.38 no.1
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    • pp.1-10
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    • 1999
  • According to zoogeographic analysis, distribution types of Korean species of the subfamily Tryphoninae are as follows; Holarctic species (9.6%), Transpalearctic (38.4%), Transpalearctic-Oriental (8.2%), Eastern Palearctic (Trans-Far East Asia)-Oriental (4.1 %), Eastern Palearctic (17.8%) and Endemic (21.9%). Because of large numbers of palearctic and endemic species, we believe that the Korean Tryphoninae may have originated from northern hemisphere. The oldest fossil species of the Tryphoninae are the Catachoru rninor Townes and Urotryphon pusillus Townes in Creataceous amber from the peninsula Taimyr, Siberia. The world-wide distribution of the Tryphoninae appears to coincide with the continental movement.

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The Fish community of the Ungchon Stream Around the New Dam Intended Area (댐예정지를 중심으로 한 웅천천 수계의 어류군집에 관하여)

  • Hong, Young-Pyo;Jang, Min-Ho;Kang, Ho;Choi, Sin-Seok
    • Korean Journal of Environmental Biology
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    • v.17 no.1
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    • pp.79-88
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    • 1999
  • The fish fauna, notified species, and fish community was studied at the six stations in a 18km section of the Ungchon stream, a mountain stream in Korea, where a new dam is planned from 1994 to 1996. Twentynine species (11 families, 25 genera) were found. Nine species were endemic to Korea. The Dominant specie in the studied area were Zacco temmincki, Z. platypus and Squalidus gracilis majimae. Some of the korean endemic species (Coreoperca herzi) including the Korean endangered species such as Pseudopungtudgia nigra and Liobagrus obesus were not found in this stream anymore. The average of area density was 0.69 individuals per square meter and the volume density was 1.45 individuals per cubic meter. Species diversity was highest in the middle region. According to community correlation coefficients of six stations, similality coefficients of station one, four, five and six were higher than others, but no significant difference in the composition of fish fauna was found between six study staions.

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Prionolabis crane flies (Diptera: Limoniidae) of Korea

  • Podenas, Sigitas;Park, Sun-Jae;Byun, Hye-Woo;Aukstikalniene, Rasa
    • Journal of Species Research
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    • v.11 no.1
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    • pp.29-37
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    • 2022
  • This study is based on crane fly specimens collected more than 80 years ago in 1938-1939 and preserved at the United States National Museum, Smithsonian Institution, Washington DC, USA. Despite many attempts with a variety of methods, no additional specimens of this genus were captured. This likely means that that this genus is extinct on the Korean Peninsula, or its distribution is restricted to the northern areas of the Democratic People's Republic of Korea (North Korea). The genus Prionolabis Osten Sacken, 1860 with four species, one of them Prionolabis dis(Alexander, 1950) endemic to North Korea, was recorded by Ch. P. Alexander (Alexander, 1938, 1940, 1950). All succeeding papers listing these species were based on these original works without study based on actual specimens. For each species, we present general information on genus, redescriptions of species based on Korean specimens, illustrations of important taxonomical structures, elevation range, period of activity, habitat information, general distribution, and a distribution map for the Korean Peninsula.

Identification of Mycobacterium avium complex (MAC) Clinical Strains to a Species Level by Sequencing and PCR-SSCP Analysis of rpoB DNA (비결핵항산성균의 rpoB DNA 염기서열과 SSCP pattern 분석에 따른 Mycobacterium avium complex (MAC) 임상분리균주의 동정)

  • Kim, Bum-Joon;Lee, Seung-Hyun;Lee, Kuen-Hwa;Park, Chung-Kyu;Choi, Myung-Sik;Kim, Ik-Sang;Choi, Sung-Bai;Hwang, Eung-Su;Cha, Chang-Yong;Kim, Sang-Jae;Bai, Gill-Han;Kook, Yoon-Hoh
    • The Journal of the Korean Society for Microbiology
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    • v.34 no.5
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    • pp.491-500
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    • 1999
  • A recent study showed that comparative sequence analysis of rpoB DNAs could reveal natural relationships in genus Mycobacterium [J Clin Microbial. 37 (6). 1999]. rpoB DNAs showed interspecies variation and intraspecies conservation. Based on these data, we developed polymerase chain reaction-single strand conformation polymorphism (PCR-SSCP) protocols which enable species differentiation in genus Mycobacterium. When this assay was applied to 24 clinical isolates identified as M. avium complex (MAC) by biochemical test, these were successfully differentiated into M. avium and M. intracellulare. These results were concordant with those obtained by 16s rDNA analysis. It is the first report that PCR-SSCP analysis of rpoB DNA could be used for species differentiation of MAC strains.

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