• Korean Journal of Ecology and Environment
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• v.55 no.1
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• pp.60-75
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• 2022

The Bayesian algorithm model is a model algorithm that calculates probabilities based on input data and is mainly used for complex disasters, water quality management, the ecological structure between living things or living-non-living factors. In this study, we analyzed the main factors affected Korean Estuary Trophic Diatom Index (KETDI) change based on the Bayesian network analysis using the diatom community and physicochemical factors in the domestic estuarine aquatic ecosystem. For Bayesian analysis, estuarine diatom habitat data and estuarine aquatic diatom health (2008~2019) data were used. Data were classified into habitat, physical, chemical, and biological factors. Each data was input to the Bayesian network model (GeNIE model) and performed estuary aquatic network analysis along with the nationwide and each coast. From 2008 to 2019, a total of 625 taxa of diatoms were identified, consisting of 2 orders, 5 suborders, 18 families, 141 genera, 595 species, 29 varieties, and 1 species. Nitzschia inconspicua had the highest cumulative cell density, followed by Nitzschia palea, Pseudostaurosira elliptica and Achnanthidium minutissimum. As a result of analyzing the ecological network of diatom health assessment in the estuary ecosystem using the Bayesian network model, the biological factor was the most sensitive factor influencing the health assessment score was. In contrast, the habitat and physicochemical factors had relatively low sensitivity. The most sensitive taxa of diatoms to the assessment of estuarine aquatic health were Nitzschia inconspicua, N. fonticola, Achnanthes convergens, and Pseudostaurosira elliptica. In addition, the ratio of industrial area and cattle shed near the habitat was sensitively linked to the health assessment. The major taxa sensitive to diatom health evaluation differed according to coast. Bayesian network analysis was useful to identify major variables including diatom taxa affecting aquatic health even in complex ecological structures such as estuary ecosystems. In addition, it is possible to identify the restoration target accurately when restoring the consequently damaged estuary aquatic ecosystem.

• Ocean and Polar Research
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• v.39 no.4
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• pp.245-255
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• 2017

There are a number of pieces of evidences that suggest a link between marine diatoms and microorganisms, but knowledge about related microbial communities is greatly lacking. The present study investigated the microbial community structures related to the growth of the marine diatom Cyclotella meneghiniana. We collected free-living bacteria (FLB) and particle-associated bacteria (PAB) at each growth stage (e.g., lag, exponential, stationary and death) of the diatom, and analyzed their bacterial 16S rDNA using pyrosequencing. Metagenomics analysis showed that community structures of FLB and PAB differed considerably with the progress of growth stages. FLB showed higher diversity than PAB, but variation in the different growth stages of C. meneghiniana was more evident in PAB. The proportion of the genus Hoeflea, belonging to the order Rhizobiales, was dominant in both FLB and PAB, and it gradually increased with the growth of C. meneghiniana. However, Enhydrobacter clade tended to considerably decrease in PAB. In addition, Marinobacter decreased steadily in FLB, but first increased and then decreased in PAB. These results suggest that Hoeflea, Enhydrobacter, and Marinobacter may be closely related to the growth of diatom C. meneghiniana.

• Environmental Engineering Research
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• v.19 no.3
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• pp.223-228
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• 2014

We investigated seasonal algae variability and its influence on water quality in an agricultural reservoir. We observed that maximal total phosphorus (TP) loads were 1,715 kg from farmland in September, which changed the ecosystem in the reservoir. At this time, Dictyosphaerium pulchellum as green algae dominated. Aulacoseira ambigua as diatom became the most dominant from November 2010 to May 2011. The diatom was sensitive to water temperature. Microcystis spp. and Oscillatoria spp. as cyanobacteria were dominant during summer and fall, and sank down to the sediment during winter and spring. Increasing water temperature during summer causes anaerobic conditions in the sediment, leading to regrowth of cyanobacteria. With regard to the ratio of total nitrogen (TN) to TP, green algae and cyanobacteria were dominant at TN:TP ratios less than 20-30. Diatoms were dominant at TN:TP ratios greater than 30-40. Statistical analysis indicated that diatom growth was dependent on water temperature and TN concentration. TP concentration and water temperature were the key factors for the growth of cyanobacteria and green algae. From these results of this study, the management of land-use was an important parameter for improving water quality in the agricultural reservoir.

• Korean Journal of Ecology and Environment
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• v.43 no.2
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• pp.232-241
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• 2010

Epilithic diatom communities and water quality were monitored to evaluate the ecological impact of the inflow of Wonju-stream passing through the urban area in the Seom River Watershed. We selected the 14 sampling stations (5 main stream sites and 9 tributary sites), and collected diatom and water samples between October 2007 and September 2008, on the seasonal basis. The results indicate that most water quality parameters showed the site-specific patterns over the study, except for water temperature and dissolved oxygen. The levels of water quality parameters were highest at the site of Wonju stream, whereas the lowest in the upstream sites, and intermediate or gradually decreased in the downstream sites of the Seom river. One species, Achnanthes convergens, showed the highest biomass and frequency over the sites, while three saprophilous species-Navicula goeppertiana, Navicula subminuscula, Nitzschia palea were appeared only in Wonju Stream and other polluted sites. According to trophic diatom index (TDI) values, which were highly correlated with nutrients and EC, the study sites were classified into three classes: upstream and tributary (Class A and B), Wonju Stream (Class D), and mixed zone and downstream (Class C). A cluster analysis supported the result of TDI classification. Therefore, Wonju-stream located in populated urban area exerted the adverse ecological effects on the epilithic diatom community and water quality of the lower Seom River System, although its severity gradually decreased downstream.

• Ocean and Polar Research
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• v.41 no.3
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• pp.203-211
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• 2019

Diatom growth is affected by associated bacteria that probably provide useful substances like vitamins. In the present study, we analysed the variation of vitamins $B_1$, $B_7$ and $B_{12}$ on the growth stages of the marine diatom Cyclotella meneghiniana and assessed putative vitamin-producing bacteria (e.g., ${\alpha}$- and ${\gamma}$-proteobacteria). HPLC analysis showed that total amounts of vitamins $B_1$ and $B_{12}$ decreased with cell growth, whereas vitamin $B_7$ increased gradually on the growth stages. $B_1$ and $B_{12}$ measured 0.5% and 0.18% at the stationary phase, following 0.25% and 0.72% at the lag phase. They considerably increased to 0.75% and 0.77% at the death stage. 16S pyrosequencing showed relatively high ratios of ${\alpha}$- and ${\gamma}$-proteobacteria in all the growth stages of the C. meneghiniana. In addition, we detected previously-reported vitamin-producing bacteria, such as Marinobacter, in high numbers. The species was dorminant in the lag (relative abundance 72%) and exponetial (72%) stages, whareas it decreased in the stationary (49%) and death (48%) stages. These results suggest that vitamins $B_1$ or $B_{12}$ may be necesaary for diatom growth and that associated bacteria, including Marinobacter, may produce these substances for the cell growth of C. meneghiniana.

• Korean Journal of Ecology and Environment
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• v.48 no.2
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• pp.115-121
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• 2015

In order to assess the water quality of Kumho river using Diatom Assemblage Index to organic water pollution (DAIpo) and to campare from the previous water quality, 5 sites in Kumho river were selected and assessed total of 6 times, every April and September from April 2010 to September 2012. As a result, 116 taxa were found in 2 Order, 3 Suborder, 7 Families, 26 Genera, 103 species and 13 varieties. Saprophilous species of 10 dominant species including Achnanthes minutissima, were increased as going to downstream sites. Correlation coefficients (r) between epilithic diatom communities and physicochemical factors were from - 0.62 to 0.71. Correlation coefficients (r) between TN and diatom indices (DAIpo, TDI) were 0.57 and 0.65, respectively. Therefore, epilithic diatom communities were greatly influenced by TN. The Correlation between DAIpo and TDI measured to be high in correlation coefficient (r=0.62) from the result of correlation analysis. Mean of DAIpo values ranged between 37.24~74.98 and decreased as going to downstream sites. Saprobic level was estimated as ${\beta}$-oligosaprobic at st. 1, ${\alpha}$-oligosaprobic at st. 2 and ${\beta}$-mesosaprobic at st. 3. But st. 4 and 5 which were ${\alpha}$-mesosaprobic and polysaprobic in the previous results, were improved as ${\beta}$-mesosaprobic. The RPId, general assessment of the water quality using DAIpo, was 52.27, which means the water quality of Kumho river was middle level.

• Journal of Korean Society on Water Environment
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• v.29 no.5
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• pp.598-609
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• 2013

Spatial and temporal distribution of environmental factors and epilithic diatom communities in major rivers (30 rivers and 58 sampling points) of the Korean peninsula were surveyed each one time before (May) and after the monsoon (October) 2012. The stream of the east harbor (EAST), the south harbor (SOUTH), and the west harbor (WEST) was sampled in order. Over the survey, a total of 284 taxa were classified, and the number of diatom species in each harbor did not show significant changes after the monsoon, but a biomass significantly decreased. Results also showed that EAST deterioration of water quality and chlorophyll-a after the monsoon, was opposite to SOUTH. Five major dominant species including Nitzschia inconspicua, which contained higher biomass over the survey, were common species which widely distributed in brackish water. Indicator Species Analysis showed that a large number of clean water species in EAST and polluted water species in SOUTH and WEST were emerged respectively. In sum, the Asian monsoon significantly decreased a biomass of epilithic diatoms and water qualities over the harbors (lower stream) in the Korean peninsula, but did not change the major species indicating water quality.

• ALGAE
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• v.23 no.4
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• pp.277-288
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• 2008

The relationship between nutrients and phytoplankton dynamics was investigated daily from 12 April to 22 July 2003 in Sagami Bay, Japan. According to multidimensional scaling (MDS) and cluster analysis, phytoplankton community was divided into four distinct groups. The first group was consisted of centric diatom species, such as Guinardia spp., Detonula spp., Letocylindrus danicus, Skeletonema costatum, Eucampia zodiacus and Chaetoceros spp.. The second and third clusters comprised mainly diatoms and dinoflagellates, respectively. The other cluster was restricted to the samples collected during the last sampling period when the rainfall and river discharge was frequently recorded. Canonical correspondence analysis (CCA) was applied to analyze four groups respectively, which focused on the effects of nutrients concentration and ratio on phytoplankton variations. Based on CCA analysis, most species of centric diatom were negatively correlated with DSi concentrations and Si/N ratio. Nutrients were strongly limited phytoplankton growth during the summer when the rainfall was not observed, whereas river discharge by rainfall and counterclockwise coastal currents (although the surface circulation pattern is often altered by Kuroshio Current, the counterclockwise coastal currents are generally dominant) has brought phytoplankton population accumulation and triggered the micoalgae growth in western part of the bay. Phosphorous (P) was strongly limited after significantly increases in the phytoplankton abundances. However, silicate (Si) was not a major limiting factor for phytoplankton production, since Si/DIN and Si/P ratio did not create any potential stoichiometric limitation. This indicates that high Si availability contributes favorably to the maintenance of diatom ecosystems in Sagami Bay.

• Korean Journal of Ecology and Environment
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• v.42 no.1
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• pp.124-133
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• 2009

Effects of substrates on the relative immigration activities (RIAs) of epilithic diatoms were examined in Sum River, a tributary of South Han River, Korea. Two hundreds of tile substrates coated with 5% agar were deposited at seven study stations (30 tiles per site) for one month from March 7 to April 7, 2008. Water sampling, physico-chemical factor measurement, and diatom analysis were performed in the field and laboratory. Over the study, major epilithic diatom species were Nitzschia amphibia, Navicula subminuscula, Cymbella minuta in both the natural and artificial substrates. Two dominant species, Nitzschia amphibia and Cymbella minuta often found at seven stations. Among all observed taxa, Nav. subminuscula and Caloneis silicula showed the highest RIA, with the value over 15 throughout the study. Regarding the algal morphology, the biraphe type species showed higher RIA than any other morph, while they comprised over 55% of total biomass, indicating a density effect. Additionally, a significant relationship between RIA and 20-day deposited substrate (p<0.05) showed in two diatom species, Nitzschia fonticola, Gomphonema quadripunctatum, which showed relatively high RIAs. These results indicate that the relative immigration activities of epilithic diatom species can be influenced by algal density in the water and substrate, nutrients, and deposited time at least 20 days.

• Journal of the Korean Geographical Society
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• v.33 no.2
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• pp.143-163
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• 1998

In order to clarify the depositional environment and sea-level change at Ilsan area including Gawaji and Saemal valley plains, which is located at the right side in downstream of the Han River, boring data, radiocabon dating and diatom analysis were comprehensively investigated. As a result, the palaeogeographies fo this area altered by the transgressions and regressions after 7,000 y. BP could be restored. The high tide sea-level(mean high water level of spring tide) was arrived ca. 7,000y. BP at the valley plain and risen to ca. 5.5m at ca. 5000y. BP. Since then, the sea-level was kept up the same level to ca. 3,200 BP. The descended sea-level to ca. 2,300 BP was risen up to ca. 5.8m in ca. 1,800 y. BP. It is presumed that such a sea-level change as well as the different sediments in quantity supplied from the river basin of the valley plain could be effected to change diversely the depositional environment of the study area and eventually to the prehistoric human life.