• 제목/요약/키워드: conformation change

검색결과 110건 처리시간 0.026초

용매 증발 과정 중 마이크로웨이브 처리가 PVDF 복합재료 필름의 결정화 형태에 미치는 영향 (Effect of Microwave Irradiation on Conformation of Crystalline of PVDF Nano-composite Film in the Solvent Evaporation Process)

  • 홍현수;김성수
    • Composites Research
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    • 제33권1호
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    • pp.19-24
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    • 2020
  • 본 연구에서는 Poly(vinylidene fluoride) (PVDF) 필름 제작 과정 중 마이크로웨이브 처리 과정을 도입하여 β 결정성 향상에 어떠한 영향을 미치는지 분석하였다. 또한, 나노 입자 보강제로써 금속산화물인 TiO2를 혼합하여 PVDF 복합재료 필름을 만들어, 전기적 음성도 차이로 인한 반데르발스 힘을 통해 β 결정 형성을 추가적으로 향상시키려고하였다. FTIR과 XRD 분석을통하여해당필름시편들에대해결정화도(Crystallinity) 및결정성(Crystalline)을 분석하였다. 이러한 분석 결과를 바탕으로, 용매 증발 과정 중 마이크로웨이브 처리 과정이 PVDF 필름의 결정화도를 높여주는 것을 확인하였고, 추가적인 연신(Stretching) 공정을 통해 α 결정에서 β 결정 변화(Crystalline phase change)가 발생함으로써 결과적으로 더 많은 β 결정성을 나타내었다. 그리고 금속산화물을 넣은 PVDF 복합재료 필름이 Neat PVDF 필름보다 상대적으로 더 높은 β 결정성을 나타내는 것을 확인하였다.

Electronic Properties and Conformation of$\pi$-Conjugated Molecules with Phenyl and Heterocyclic Group

  • Eunho Oh;Kim, Cheol-Ju
    • Journal of Photoscience
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    • 제7권2호
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    • pp.67-71
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    • 2000
  • A quantum-chemical investigation on the conformations and electronic properties of trans(diphenyl-diheterocyclic) ethenes(t-PHEs) as building block for fully $\pi$-conjuated polymer are performed in order to display the effects of heterocyclic ring substitution. Structures for the molecules, t-PHEs were fully optimized by using semiempirical AM1, PM3 methods, and ab initio HF methods, with 6-31G basic set. The potential energy curves with respect to the change of single are obtained by using ab initio HF/6-31G basic set. The curves are not similar shapes in the molecules with respect to heterocyclic rings. It is shown that the steric repulsion interactions between phenyl ring and heterocyclic ring are subjected to different type with the respect to each heterocyclic ring. Electronic properties of the molecules were molecules were obtained by applying the optimized structures and selected geometries to the extended Huckel method. To investigate the change of HOMO-LUMO gap with respedt to the torsion angle, we select the optimized structures. By using the results, the dependency of conjugation for the energy gaps is analyzed. For t-PHE the energy gap increase up to 0.52 eV compared with its planar structure. In the cases of t-PHE and t-PHE, the energy gap increase by 1.29 and 1.15 eV, respectively, compared with its planar structure.

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Functional Studies of Cysteine Residues in Human Glutathione S-Transferase P1-1 by Site-Directed Mutagenesis

  • 박희중;이광수;공광훈
    • Bulletin of the Korean Chemical Society
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    • 제22권1호
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    • pp.77-83
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    • 2001
  • To gain further insight into the relationship between structure and function of glutathione S-transferase (GST), the four cysteine mutants, C14S, C47S, C101S and C169S, of human GST P1-1 were expressed in Escherichia coli and purified to electrophoretic homogeneity by affinity chromatography on immobilized glutathione (GSH). The catalytic activities of the four mutant enzymes were characterized with five different substrates as well as by their binding to four different inhibitors. Cys14 seems to participate in the catalytic reaction of GST by stabilizing the conformation of the active-site loop, not in the GSH binding directly. The substitution of Cys47 with serine significantly reduces the affinity of GSH binding, although it does not prevent GSH binding. On the other hand, the substitution of Cys101 with serine appears to change the binding affinity of electrophilic substrate by inducing a conformational change of the $\alpha-helix$ D. Cys169 seems to be important for maintaining the stable conformation of the enzyme. In addition, all four cysteine residues are not needed for the steroid isomerase activity of human glutathione S-transferase P1-1.

Structural Damage of DNA by 6-Sulfooxymethyl Benzo(a)pyrene

  • Cho, Young-Sik;Chung, An-Sik
    • BMB Reports
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    • 제28권1호
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    • pp.1-5
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    • 1995
  • The effect of 6-sulfooxymethyl benzo(a)pyrene (SMBP) on conformational changes of calf thymus DNA was investigated. As SMBP is a strong electrophile, the covalent binding of SMBP to DNA should distort three dimensional conformation of DNA at the binding sites. A formaldehyde-unwinding methods were used to determine the rate of DNA denaturation. The increase in absorbance at 251nm was detected by addition of formaldehyde following treatment with SMBP. SMBP changed supercoiled DNA to relaxed and linear DNA as determined by electrophoresis, which was similar to the change in DNA due to in vitro treatment with benzo(a) pyrene diol epoxide. Treatment with SMBP completely denatured DNA under alkaline conditions. However, DNA was nicked or partially denatured under neutral condition. The absorption band of DNA was increased by the treatment with SMBP in V79 cells, which may be explained by the formation of stabilized SMBP-DNA adduct.

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Free Energy and Hydration Free Energy of N-acetyl-N'-methylalaninamide

  • Young Kee Kang;Mu Shik Jhon
    • Bulletin of the Korean Chemical Society
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    • 제12권5호
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    • pp.495-499
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    • 1991
  • The changes in the free energy and hydration free energy of N-acetyl-N'-methylalaninamide in the unhydrated and hydrated states were calculated with ECEPP/2 and the hydration shell model. The configurational entropy change of each conformation in both states were computed by a harmonic method. To understand the hydration structure of each hydrated conformation, the hydration-shell coordination numbers of functional. groups of the molecule were estimated from water-accessible volumes, and the contributions of water-accessible volume and polarization of each group to the hydration free energy were analyzed. The results show a reasonable agreement with those of recent theoretical studies and experiments.

Comparison of Structural Types of L-Alanine Pentamer by Quantum Chemical Calculation

  • Kobayashi, Minoru;Sim, Jae Ho
    • 공업화학
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    • 제33권4호
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    • pp.425-430
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    • 2022
  • L-alanine (LA, as an amino acid residue) pentamer model was used to investigate changes in the dihedral angle, intramolecular hydrogen bonding and formation energies during structural optimization. LA pentamers having four conformation types [𝛽: 𝜑/𝜓=t-/t+, 𝛼: 𝜑/𝜓=g-/g-, PPII: 𝜑/𝜓=g-/t+ and P-like: 𝜑/𝜓= g-/g+] were carried out by quantum chemical calculations (QCC) [B3LYP/6-31G(d,p)]. In LA, 𝛽, 𝛼, and P-like types did not change by optimization, having an intra-molecular hydrogen bond: NH⋯OC (H-bond), and PPII types in the absence of H-bond were transformed into P-like at the designated 𝜓 of 140°, and to 𝛽 at that of 160° or 175°. P-like and 𝛼 were about 0.5 kcal/mol/mu more stable than 𝛽. In order to understand the processes of the transformations, the changes of 𝜑/𝜓, distances of NH-OC (dNH/CO) and formation energies (𝜟E, kcal/mol/mu) were examined.

이량체액정(CBA-10)의 상전이에 따른 열역학적 특성에 관한 연구 (A Study on the Thermodynamic Characteristics of Dimer Liquid Crystal(CBA-10) by Phase Transition)

  • 강봉근;곽선엽;남수용
    • 공업화학
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    • 제8권5호
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    • pp.796-803
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    • 1997
  • 주쇄형고분자액정(CBA-10)의 PVT와 $^2H$-NMR측정으로 상전이에 따른 열역학적 특성을 고찰하였다. 부피 변화에 의한 NI 및 CN 상전이가 발생하였으며, 일정체적하의 상전이 엔트로피 $({\Delta}S_{NI})_V$$({\Delta}S_{CN})_V$값 12.6, $65.3J/mol{\cdot}K$를 각각 구하였으며, 체적변화에 따른 엔트로피는 일정압력하에 얻어진 전이엔트로피의 40~60%정도였다. $^2H$-NMR/RIS 해석으로 nematic conformation을 결정하였으며, NI 및 CN 상전이에 의한 conformation entropy를 구하여 PVT측정에서 구한 일정체적하의 엔트로피와 비교한 결과, 거의 대응하다는 것을 알 수 있었다. 이러한 결과로부터 주쇄형액정의 상전이에 있어서 spacer conformation 변화가 중요한 역할을 하고 있음을 밝혔다.

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The Nature of Water in Tactic Poly (2-Hydroxyethyl Methacrylate) Hydrogels

  • Kim, Eui-Hwan;Jeon, Sang-Il;Yoon, Sung-Chul;Jhon, Mu-Shik
    • Bulletin of the Korean Chemical Society
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    • 제2권2호
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    • pp.60-66
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    • 1981
  • The hypothesis that three classes of water exist in hydrogels, namely X water (free water-like), Z-water (bound water-like), and Y water (interfacial water-like), has been verified and generally accepted. To further check the validity of this hypothesis and to study the nature of X, Y, and Z water as conformation changes, several experiments have been done using Tactic Poly(2-hydroxyethyl methacrylate) (P-HEMA) gels. Thermal expansively data for tactic P-HEMA gel was obtained. In each case of isotactic and syndiotactic P-HEMA, the higher water content gels showed an extremely sharp volume change at $0^{\circ}C$, indicating the presence of normal free water-like. Lower water content gels showed no anomalous change in thermal expansion, indicating that the water is bound water-like. The medium water content gels exhibited intermediate behavior. These results were also confirmed by bulk gel conductivity measurments. The differential scanning calorimeter(DSC) experiment was simply introduced to further verify the bound water-like quantities which was obtained by the method of dilatometry and specific conductivity. Observing the amounts of X, Y, and Z water with the change of tacticity, the similar content of bound water-like may be due to the same primary structure of isotactic and syndiotactic polymer and the difference in free and interfacial water-like content may be due to the difference in secondary and tertiary structure of tactic polymer. Therefore, as the polymer conformation varies, the free and interfacial water-like content will be varied. In order to demonstrate these concepts, Russel et al.'s CPK space-filling molecular models of isotactic and syndiotactic P-HEMA was utilized.

사람에 존재하는 phosphatase인 chronophin의 환원된 상태에서의 구조 (Closed Conformation of a Human Phosphatase, Chronophin under the Reduced Condition.)

  • 조효제;강범식
    • 생명과학회지
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    • 제18권4호
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    • pp.585-589
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    • 2008
  • Actin cytoskeleton rearrangement를 조절하는 cofilin은 인산기가 제거되면서 활성화되는데 이를 담당하는 효소가 chronophin이다. 이 효소는 비타민 $B_6$의 활성형태인 pyridoxal 5'-phosphate (PLP)의 세포 내 농도를 조절하는 PLP phosphatase로도 알려져 있다. Chronophin은 cap 도메인과 core 도메인을 갖는 HAD family에 속하는 phosphatase이며 다른 HAD phosphatase와 같이 기질결합을 위해 cap 도메인과 core 도메인 사이의 활성부위가 노출되는 열린 형태로의 전환이 있을 것으로 추정되었다. 이전의 밝혀진 chronophin/PLPP의 결정구조에서는 단백질의 결정화과정이 산화된 상태에 이루어졌기에 cap 도메인의 C91과 core 도메인의 C221 사이에 disulfide bond가 있었으며 이것이 cap 도메인과 core 도메인사이의 움직임을 막고 있었다. 본 연구에서는 환원된 상태의 chronophin의 결정체를 얻어 chronophin의 구조를 규명하였다. 환원된 상태의 chronophin의 구조에는 C91과 C221간의 disulfide 결합은 없었으나 산화된 상태와 동일한 닫힌 형태이었으며 국부적인 core 도메인의 움직임이외에는 core 도메인과 cap 도메인의 구조에는 변화가 없었다. 이는 chronophin이 기질이 없는 상태에서 닫힌 형태로 유지되는 것이 disulfide bond에 의한 것이 아님을 의미하며 세포 내의 환원된 상태에서도 닫힌 구조를 유지함으로서 높은 기질 특이성을 보여줄 것임을 암시한다.

Large Conformational Changes and Molecular Recognition in Signal Transduction: Calmodulin and Active Transport/Chemosensory Receptors

  • QUIOCHO, FLORANTE A.
    • 한국생물물리학회:학술대회논문집
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    • 한국생물물리학회 1997년도 학술발표회
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    • pp.9-10
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    • 1997
  • Calmodulin: very large conformation change of helix uncoiling, hinge-bending and domain rotation. Calmodulin (CaM) is the principal Ca$\^$2+/ -dependent regulator of a variety of important eukaryotic cellular processes. In many of these processes, calmodulin activates a plethora of target enzymes, and the calmodulin-binding domains in several targets have been shown to residue in a region of about 18-residue peptide segment.(omitted)

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