• Title/Summary/Keyword: component model

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Genetic characteristics of Korean Jeju Black cattle with high density single nucleotide polymorphisms

  • Alam, M. Zahangir;Lee, Yun-Mi;Son, Hyo-Jung;Hanna, Lauren H.;Riley, David G.;Mannen, Hideyuki;Sasazaki, Shinji;Park, Se Pill;Kim, Jong-Joo
    • Animal Bioscience
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    • v.34 no.5
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    • pp.789-800
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    • 2021
  • Objective: Conservation and genetic improvement of cattle breeds require information about genetic diversity and population structure of the cattle. In this study, we investigated the genetic diversity and population structure of the three cattle breeds in the Korean peninsula. Methods: Jeju Black, Hanwoo, Holstein cattle in Korea, together with six foreign breeds were examined. Genetic diversity within the cattle breeds was analyzed with minor allele frequency (MAF), observed and expected heterozygosity (HO and HE), inbreeding coefficient (FIS) and past effective population size. Molecular variance and population structure between the nine breeds were analyzed using a model-based clustering method. Genetic distances between breeds were evaluated with Nei's genetic distance and Weir and Cockerham's FST. Results: Our results revealed that Jeju Black cattle had lowest level of heterozygosity (HE = 0.21) among the studied taurine breeds, and an average MAF of 0.16. The level of inbreeding was -0.076 for Jeju Black, while -0.018 to -0.118 for the other breeds. Principle component analysis and neighbor-joining tree showed a clear separation of Jeju Black cattle from other local (Hanwoo and Japanese cattle) and taurine/indicine cattle breeds in evolutionary process, and a distinct pattern of admixture of Jeju Black cattle having no clustering with other studied populations. The FST value between Jeju Black cattle and Hanwoo was 0.106, which was lowest across the pair of breeds ranging from 0.161 to 0.274, indicating some degree of genetic closeness of Jeju Black cattle with Hanwoo. The past effective population size of Jeju Black cattle was very small, i.e. 38 in 13 generation ago, whereas 209 for Hanwoo. Conclusion: This study indicates genetic uniqueness of Jeju Black cattle. However, a small effective population size of Jeju Black cattle indicates the requirement for an implementation of a sustainable breeding policy to increase the population for genetic improvement and future conservation.

Rheological Studies of the Sausage Added the Over-matured Fruits Tenderizer (과숙청과물 연화제를 첨가한 소시지의 물성 연구)

  • Koak, Ji-Hye;Baik, Moo-Yeol;Kim, Byung-Yong
    • Food Engineering Progress
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    • v.15 no.2
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    • pp.116-121
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    • 2011
  • This study was aimed to analyze the changes in rheological properties of sausages added tenderizer made with over-matured used-up fruits such as kiwifruit, grape, and pear. The tenderizers were manufactured by various concentration of fruit extract and added to the sausage at different heating temperatures. Failure stress and stress relaxation of beef sausage mixed with different tenderizers were measured with Rheometer, and analyzed with 3-element Maxwell model. As a result of the rheological measurements, over-matured kiwifruit extract showed the best tenderness effect among other fruit extracts, and the more kiwi contents were added, the beef texture turned to softer. The instantaneous stress and elastic component of beef mixed with various tenderizers were decreased at higher concentrations and lower heating temperatures. This study was well expressed the numerical magnitude of viscoelastic components of beef sausages to determine the tenderizer effect.

Application of Near-Infrared Reflectance Spectroscopy to Rapid Determination of Seed Fatty Acids in Foxtail Millet (Setaria italica (L.) P. Beauv) Germplasm

  • Lee, Young Yi;Kim, Jung Bong;Lee, Sok Young;Lee, Ho Sun;Gwag, Jae Gyun;Kim, Chung Kon;Lee, Yong Beom
    • Korean Journal of Breeding Science
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    • v.42 no.5
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    • pp.448-454
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    • 2010
  • The objective of this study was to rapidly evaluate fatty acids in a collection of foxtail millet (Setaria italica (L.) P. Beauv) of different origins so that this information could be disseminated to breeders to advance germplasm use and breeding. To develop the calibration equations for rapid and nondestructive evaluation of fatty acid content, near-infrared reflectance spectroscopy (NIRs) spectra (1104-2494 nm) of samples ground into flour (n=100) were obtained using a dispersive spectrometer. A modified partial least-squares model was developed to predict each component. For foxtail millet germplasm, our models returned coefficients of determination ($R^2$) of 0.91, 0.89, 0.98 and 0.98 for strearic acid, oleic acid, linoleic acid, and total fatty acids, respectively. The prediction of the external validation set (n=10) showed significant correlation between references values and NIRs values ($r^2=0.97$, 0.91, 0.99 for oleic, linoleic, and total fatty acids, respectively). Standard deviation/standard error of cross-validation (SD/SECV) values were greater than 3 (3.11, 5.45, and 7.50 for oleic, linoleic, and total fatty acids, respectively). These results indicate that these NIRs equations are functional for the mass screening and rapid quantification of the oleic, linolenic, and total fatty acids characterizing foxtail millet germplasm. Among the samples, IT153491 showed an especially high content of fatty acids ($84.06mg\;g^{-1}$), whereas IT188096 had a very low content ($29.92mg\;g^{-1}$).

SEM-CT: Comparison of Problem Solving Processes in Science(S), Engineering(E), Mathematic(M), and Computational Thinking(CT) (SEM-CT: 과학(S), 공학(E), 수학(M)적 문제해결과정과 컴퓨팅 사고(CT))

  • Nam, Younkyeong;Yoon, JinA;Han, KeumJoo;Jeong, JuHun
    • The Journal of Korean Association of Computer Education
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    • v.22 no.3
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    • pp.37-54
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    • 2019
  • The main purpose of STEM education is to understand methods of inquiry in each discipline to develop convergent problem solving skills. To do this, we must first understand the problem-solving process that is regarded as an essential component of each discipline. The purposes of this study is to understand the relationship between the problem solving in science (S), engineering (E), mathematics (M), and computational thinking (CT) based on the comparative analysis of problem solving processes in each SEM discipline. To do so, first, the problem solving process of each SEM and CT discipline is compared and analyzed, and their commonalities and differences are described. Next, we divided the CT into the instrumental and thinking skill aspects and describe how CT's problem solving process differs from SEM's. Finally we suggest a model to explain the relationship between SEM and CT problem solving process. This study shows how SEM and CT can be converged as a problem solving process.

Molecular analysis of genetic diversity, population structure, and phylogeny of wild and cultivated tulips (Tulipa L.) by genic microsatellites

  • Pourkhaloee, Ali;Khosh-Khui, Morteza;Arens, Paul;Salehi, Hassan;Razi, Hooman;Niazi, Ali;Afsharifar, Alireza;Tuyl, Jaap van
    • Horticulture, Environment, and Biotechnology : HEB
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    • v.59 no.6
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    • pp.875-888
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    • 2018
  • Tulip (Tulipa L.) is one of the most important ornamental geophytes in the world. Analysis of molecular variability of tulips is of great importance in conservation and parental lines selection in breeding programs. Of the 70 genic microsatellites, 15 highly polymorphic and reproducible markers were used to assess the genetic diversity, structure, and relationships among 280 individuals of 36 wild and cultivated tulip accessions from two countries: Iran and the Netherlands. The mean values of gene diversity and polymorphism information content were 0.69 and 0.66, respectively, which indicated the high discriminatory power of markers. The calculated genetic diversity parameters were found to be the highest in wild T. systola Stapf (Derak region). Bayesian model-based STRU CTU RE analysis detected five gene pools for 36 germplasms which corresponded with morphological observations and traditional classifications. Based on analysis of molecular variance, to conserve wild genetic resources in some geographical locations, sampling should be performed from distant locations to achieve high diversity. The unweighted pair group method with arithmetic mean dendrogram and principal component analysis plot indicated that among wild tulips, T. systola and T. micheliana Hoog exhibited the closest relationships with cultivated tulips. Thus, it can be assumed that wild tulips from Iran and perhaps other Middle East countries played a role in the origin of T. gesneriana, which is likely a tulip species hybrid of unclear origin. In conclusion, due to the high genetic variability of wild tulips, they can be used in tulip breeding programs as a source of useful alleles related to resistance against stresses.

Effects of Waveform Distribution of Tsunami-Like Solitary Wave on Run-up on Impermeable Slope (고립파(지진해일)의 파형분포가 불투과 경사면의 처오름에 미치는 영향)

  • Lee, Woo-Dong;Kim, Jung-Ouk;Hur, Dong-Soo
    • Journal of Ocean Engineering and Technology
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    • v.33 no.1
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    • pp.76-84
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    • 2019
  • For decades, solitary waves have commonly been used to simulate tsunami conditions in numerical studies. However, the main component of a tsunami waveform acts at completely different spatial and temporal distributions than a solitary waveform. Thus, this study applied a 2-D numerical wave tank that included a non-reflected tsunami generation system based on Navier-Stokes equations (LES-WASS-2D) to directly simulate the run-up of a tsunami-like solitary wave on a slope. First, the waveform and velocity due to the virtual depth factor were applied to the numerical wave tank to generate a tsunami, which made it possible to generate the wide waveform of a tsunami, which was not reproduced with the existing solitary wave approximation theory. Then, to validate the applied numerical model, the validity and effectiveness of the numerical wave tank were verified by comparing the results with the results of a laboratory experiment on a tsunami run-up on a smooth impermeable 1:19.85 slope. Using the numerical results, the run-up characteristics due to a tsunami-like solitary wave on an impermeable slope were also discussed in relation to the volume ratio. The maximum run-up heights increased with the ratio of the tsunami waveform. Therefore, the tsunami run-up is highly likely to be underestimated compared to a real tsunami if the solitary wave of the approximation theory is applied in a tsunami simulation in a coastal region.

A Study on User - centered Usability Elements of User Interface Designs in an Augmented Reality Environment (증강현실 사용자 인터페이스의 사용자중심 사용성 요소 연구)

  • Kim, Un;Lee, Cheol-Seung
    • The Journal of the Korea institute of electronic communication sciences
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    • v.13 no.6
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    • pp.1317-1322
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    • 2018
  • In order to complete the AR UI design simply and quickly, the usable factors were studied in this thesis. The primary aim of interface design is to increase the usability. The various factors should be considered together when we evaluate the usability. The idealized usable working model is based on user-centered with the aim of perceiving the interests of users, operating easily and completing targets. In order to ensure the types of usable factors, literature survey method had been used and a total of 85 usable factors had been collected by this survey. To make the usable factors can adapt the augmented reality, the concept of factors should be redefined. We extract the items which is adaptable and user-centered, combine or delete the items that have the same meanings and finally select 25 usable evaluative factors. Then we take HCI professional as the object and collect the data by Heuristic Evaluation. We systematize the usable factors by Principal Component Analysis, and observe the correlation between the usable factors and classify those which have high correlation.

The Performance Analysis of the Parameter Extracting Technique for the Vibration Monitoring System in High Voltage Motor (고압전동기용 진동 감시 시스템의 계수 추출기법 성능 분석)

  • Park, Jung-Cheul;Lee, Dal-Ho
    • The Journal of Korea Institute of Information, Electronics, and Communication Technology
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    • v.12 no.5
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    • pp.529-536
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    • 2019
  • In this paper, the signals of the sensor for extracting characteristic parameters of the rotor are collected and the performance of the extraction technique is analyzed. To this end, a vibration test league was developed for conducting model tests to analyze the signal characteristics under normal operation. As a result, it is judged that no change in the measured the raw data amplitude will occur in the acceleration sensor with the unbalanced mass measured from the acceleration sensor. Performing FFT showed a significant increase in amplitude of the rotational frequency of 20 Hz as the unbalanced mass increased. The analysis results according to the change in the unequal mass of the speed sensor also showed a significant increase in the 1X Harmonics component, such as the acceleration sensor. There was no change in the amplitude of the acceleration sensor data when the misalignment occurred, and for the Envelope data, the amplitude of 2X (40 Hz) was increased depending on the degree of misalignment. The velocity sensor at change of misalignment also showed similar results to the acceleration sensor, and the peak was reduced at 600 Hz as the load increased in the frequency spectrum.

Dynamic Modeling of Scissors Structure and Stiffness Analysis Based on Deployed Configuration (전개형 시저스 구조물의 동역학적 모델링 및 전개 완료 형상에 따른 강성 분석)

  • Kim, Tae-Hyun;Suh, Jong-Eun;Han, Jae-Hung
    • Journal of the Korean Society for Aeronautical & Space Sciences
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    • v.47 no.6
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    • pp.405-413
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    • 2019
  • Deployable structures are widely used for space mission because of their advantages in storage and transportation coming from its transformability of configuration. The space structures should be designed with high stiffness to withstand the various types of disturbance that they encounter during operation. Especially for the deployable structures, the internal forces loaded on the component or the stiffness at its deployed configuration should be analyzed since they usually consist of the thin and light structures. In this paper, a dynamic model of the scissors structure is established and its deployment behavior is analyzed, especially focusing on the deployment speed and the internal force on each joint. In addition, modal analysis is carried out for the 1-stage and 2-stage scissors structures in order to analyze the stiffness of the scissors structure based on its deployed configuration. The fundamental mode shapes and natural frequencies are analyzed and discussed.

Power Design of an S-Band Transmitter for KSLV-II with Derating (디레이팅을 고려한 한국형발사체 S-밴드 송신기 전원부 설계)

  • Kim, Seokkwon;Kim, Sung-Wan;Hong, Seung Hyun;Kim, Hyo Jong
    • The Journal of Korean Institute of Electromagnetic Engineering and Science
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    • v.30 no.5
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    • pp.339-347
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    • 2019
  • The power circuit design of an on-board S-band transmitter for KSLV-II with derating(operation of a component at less than its maximum rated specification to enhance reliability) is investigated. The power circuit of the transmitter consists of linear voltage regulators, DC/DC converters for regulating the DC supply, and diodes for reverse voltage protection. After analyzing the load current of the components, derating requirements are explored. Furthermore, power dissipation and junction temperature rise are considered with respect to the load current. The analysis is compared to the results from an engineering model of the transmitter. The temperature of the components is derated by >$40^{\circ}C$ in an environment where the ambient temperature is $+60^{\circ}C$, which is the acceptance test specification of high temperature.