• Horticultural Science & Technology
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• v.30 no.5
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• pp.557-567
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• 2012

This study was conducted to achieve basal information for the development of tomato cultivars with disease resistances through marker-assisted backcross (MAB). Ten inbred lines with TYLCV, late blight, bacterial wilt, or powdery mildew resistance and four adapted inbred lines with superior horticultural traits were collected, which can be useful as the donor parents and recurrent parents in MAB, respectively. Inbred lines collected were evaluated by molecular markers and bioassay for confirming their disease resistances. To develop DNA markers for selecting recurrent parent genome (background selection) in MAB, a total of 108 simple sequence repeat (SSR) primer sets (nine per chromosome at average) were selected from the tomato reference genetic maps posted on SOL Genomics Network. Genetic similarity and relationships among the inbred lines were assessed using a total of 303 polymorphic SSR markers. Similarity coefficient ranged from 0.33 to 0.80; the highest similarity coefficient (0.80) was found between bacterial wilt-resistant donor lines '10BA333' and '10BA424', and the lowest (0.33) between a late blight resistant-wild species L3708 (S. pimpinelliforium L.) and '10BA424'. UPGMA analysis grouped the inbred lines into three clusters based on the similarity coefficient 0.58. Most of the donor lines of the same resistance were closely related, indicating the possibility that these lines were developed using a common resistance source. Parent combinations (donor parent ${\times}$ recurrent parent) showing appropriate levels of genetic distance and SSR marker polymorphism for MAB were selected based on the dendrogram. These combinations included 'TYR1' ${\times}$ 'RPL1' for TYLCV, '10BA333' or '10BA424' ${\times}$ 'RPL2' for bacterial wilt, and 'KNU12' ${\times}$ 'AV107-4' or 'RPL2' for powdery mildew. For late blight, the wild species resistant line 'L3708' was distantly related to all recurrent parental lines, and a suitable parent combination for MAB was 'L3708' ${\times}$ 'AV107-4', which showed a similarity coefficient of 0.41 and 45 polymorphic SSR markers.

• Journal of the Korean Society of Food Science and Nutrition
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• v.43 no.5
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• pp.720-728
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• 2014

In order to characterize the quality of Doenjang, fermented Korean soybean paste, subjected to long-term aging, this study performed physico-chemical analyses and sensory evaluation according to aging period (from 1 to 9 years). Regarding the proximate composition of Doenjang according to aging period, moisture, crude protein, crude lipid, crude ash, and salt contents showed little differences among Doenjang samples. Amino-type nitrogen content was 1,046.7 mg% in the 1 year-aged sample, 990.9~996.9 mg% in the 2~5 year-aged samples, and 1,214.1~1,304.8 mg% in the samples fermented more than 5 years. ${\Delta}$E value, reflecting total color differences between the samples, increased according to aging period. Ratios of linoleic and linolenic acids, which are essential fatty acids in soybeans, constituted 55% of total fatty acids, which was the most abundant among all fatty acids. The major free sugar in Doenjang was fructose at a content of 1.6~2.2% in 1~9 year-aged Doenjang. Glycoside form of isoflavones in Meju constituted 77.1%, and the aglycon form constituted 22.9%. However, the glycoside type of isoflavones in soybeans was converted to aglycon type in Doenjang through fermentation and aging. In the sensory evaluation of Doenjang samples, brown color, salt smell, soy sauce flavor, and viscosity all increased according to aging period, whereas sweet flavor, roast smell, beany flavor, salty taste, and acrid taste showed no significant differences. In cluster analysis of the sensory attributes of Doenjang according to aging period, 1 year-aged Doenjang was significantly different between 2 year- and 3~5 year-aged Doenjang.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.29 no.5
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• pp.727-743
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• 1996

To know the floristic composition, vortical distribution and community structure of marine benthic algae inhabiting in the intertidal and subtidal zones of Yongil Bay, east coast of Korea, the study has performed using the quadrat method along a transect line from July, 1995 to June, 1996. In this area, a total of 144 species including 2 new red algae to Korea was found: 5 blue-green, 18 green, 20 brown and 101 red algae. The representative species throughout the year were Ulva pertusa, Gelidium amansii and Symphyocladia latiuscula. Dominant species were Sargassum thunbergii in spring, U. pertusa in summer and autumn. In winter, Chondrus ocellatus and Monostroma grevillei occurred dominantly. The standing crop exhibited mean value as $185.8g/m^2$ dry weight. Maximum value was recorded in spring $(267.3g/m^2)$ and minimum was observed in winter $(93.7g/m^2)$. Shannon's species diversity (H') and evenness (J') as maximum value were recorded in spring, whereas minimum values were shown in winter. Vertical distribution, rerognized by cluster analysis based on relative coverage of the species, could be divided into two or three algal groups except spring. In general, green algae (M. grevillei, Capsosiphon fulvescens, U. pefusa, Enteromorpha compressa) and brown algae (Sargassum fulvellum, S. thunbergii) were represented in the upper and middle zone and red algae (G. amansii, C. ocellatus, S. latiuscula, Crateloupia okamurae, Pachymeniopsis eilliptica) in the lower zone. The algal community varied according to season and environmental conditions. Particularly, seasonal variation of vortical distribution seemed to be affected primarily by water temperature. Also seasonal tidal level and tolerance of algal species to desiccation appeared to be associated with it in this area.

• Journal of the Korean Society for Marine Environment & Energy
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• v.16 no.2
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• pp.102-114
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• 2013

The basin of Lake Shihwa is one of highly industrialized region of Korea and a current environmental issue of study area is the operation of tidal power plant (TPP) to improve water quality. The application of water quality index (WQI) which integrates five physiochemical parameters (transparency, DO, DIN, DIP and chlorophyll-a) of water quality in Lake Shihwa and outer sea during 2011~2012 were performed not only to evaluate the spatial and temporal distribution of the water quality but also to assess the effect of water quality improvement by the operation of tidal power plant. The higher WQI values were observed in monitored sites near the industrial complexes in Lake Shihwa and the outfall of wastewater treatment plants (WWTPs) in outer sea. This indicates that the quality of seawater is influenced by diffuse non-point sources from industrial, municipal and agricultural areas in Lake Shihwa and by point sources from the effluence of municipal and industrial wastewater throughout WWTPs in outer sea. Mean WQI value decreased from 53.0 in 2011 to 42.8 in 2012 of Lake Shihwa. Water quality has improved significantly after TPP operation because enhancement of seawater exchange between Lake Shihwa and outer sea leads to improve a hypoxic condition which is primarily a problem in Lake Shihwa. Mean WQI of outer sea showed similar values between 2011 and 2012. However, the results of hierarchical cluster analysis and the deterioration of water quality in summer season indicate that the operation of tidal power plant was not improved the water quality in the upper most area of Lake Shihwa. To successfully improve overall water quality of Lake Shihwa, it is urgently necessary to manage and reduce of non-point pollution sources of the basin of Lake Shihwa.

• Korean Journal of Environmental Biology
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• v.28 no.3
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• pp.133-142
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• 2010

This study was performed to investigate the community structure of the macrobenthic invertebrates around Ui Island, Sinan-gun, Jeollanam-do, Korea. Benthic invertebrates were collected during May and September 2008 at seven stations. A total of 63 macrobenthic species was collected. The overall average macrobenthos density and biomass were 268 inds. $m^{-2}$ and 11.54 gWWt $m^{-2}$, respectively. Based on abundance data, there were 5 dominant species accounting for approximately 72.00% of total individuals. The polychaetes Notomastus latericeus, Scolelepis sagittaria, Amaeana occidentalis, Glycera chirori and the amphipoda Mandibulophoxus mai were found in high densities. The conventional multi-variate statistics (cluster analysis and non-metric multidimensional scaling) applied to assess spatial variation in macrobenthic assemblages. As a result, three communities could be distinguished: a sand dominated, a mixed sediment and a third community in the mud dominated station. The community in the sand dominated station was characterized by high abundance of the polychaetes S. sagittaria and the amphipods M. mai, Monoculodes sp. and Grandifoxus malipoensis. However, the most common species within the mixed sediment station were the polychaetes N. latericeus, A. occidentalis and amphipoda Urothoe sp.. Finally the mud dominated station was numerically dominated by the polychaetes Scolelepis sp., Heteromastus filiformis and Sigambra tentaculata. In conclusion, the sediment composition may be important factors controlling of the macrobenthic community structure in the study area.

• Korean Journal of Environmental Biology
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• v.38 no.1
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• pp.47-60
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• 2020

To assess the characteristics of phytoplankton community structures related to environmental factors, seasonal surveys were conducted in the vicinity of Dokdo. In 2019, phytoplankton of four phyla and 69 species were observed. During winter, unidentified nanoflagellates dominated, with an average of 3.19×10⁴ cells L^-1. In spring, unidentified nanoflagellates occupied about 50% of the composition and a variety of dinoflagellates appeared. The summer phytoplankton population showed very low abundance. In autumn, various species of Chaetoceros appeared, along with diatoms, such as Bacteriastrum spp., Guinardia striata, and Pseudo-nitzschia spp. In addition, tropical species Amphisolenia sp. and Ornithocercus sp. were observed in both 2018 and 2019. The diversity was high in the summer of 2018 and the winter of 2019 and the characteristics of each index varied. Cluster analysis was divided into four groups according to species and population characteristics regardless of the season. The stratification of spring was particularly weak. In the autumn of 2018, the water mass was stabilized in the same way as in the summer, which is considered a suitable condition for phytoplankton growth. However, in 2019, the water masses were mixed, resulting in a low population. In a phytoplankton comparison, the dominant group showed seasonal differences, except for summer when the population was low, and the difference was most pronounced in autumn. Therefore, the waters surrounding Dokdo have different environmental and ecological characteristics from the East Sea, but the seasonal characteristics of each year are considered to be different depending on the topography, various currents, the island effect, and other factors.

• Korean Journal of Ecology and Environment
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• v.51 no.1
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• pp.60-70
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• 2018

The distribution of benthic macroinvertebrates was investigated at 1,157 sites of 7 main water systems in Korea, including 442 sites of Han River system (Namhan River, Bukhan River, Han River main stream, Anseongcheon, etc.), 305 sites of Nakdong River system (Nakdong River, Hyeongsan River, Taehwa River, etc.), 199 sites of Geum River system (Geum River, Sapgyocheon, Mangyeong River, Dongjin River, etc.) 102 sites of Seomjin River system (Seomjin River), 102 sites of Yeongsan River system (Yeongsan River, Tamjin River, etc.), and 7 sites of Jeju stream system. A total of 151 families were found in the whole survey sites, including 141 families in Han River, 122 in Nakdong River, 115 in Geum River, 106 in Seomjin River, 113 in Yeongsan River, and 50 in Jeju. Chironomidae (20.8%) was the most dominant species in Korea, followed by Hydropsychidae (17.1%), Baetidae (12.6%), Tubificidae (10.3%), Heptageniidae (8.6%), Ephemerellidae (6.3%), Asellidae (2.7%), Leptophlebiidae (2.4%), Planariidae (1.7%), and Tipulidae (1.6%). Substrates compositions consisted of large sand (22.6%), large gravel (18.4%), silt (10.5%), and boulder (8.2%). The mean stream width was 133.5 m and the mean watercourse width was 61.7 m. The mean water depth and velocity were 30.2 cm and $33.1cm\;s^{-1}$, respectively. Results of cluster analysis based on distributional characteristics of benthic macroinvertebrates were divided into six groups according to the frequency of benthic macroinvertebrate taxa which appeared in the study area. Finally, altitude, current velocity and substrate composition were the most influencial factors determining the distribution patterns of macroinvertebrate communities.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.7 no.1
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• pp.20-31
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• 2002

This study was carried out to investigate the composition and the distribution of the benthic polychaetous communities in Deugryang Bay, semi-enclosed bays, on the southern coast of Korea and to deduce temporal changes in community with the comparison of the past studies. In Deugryang Bay, benthic polychaetous community structure was investigated on the base of the samples from 98 stations in 1996 and 1997. The main facies of surface sediment was clayey silt. The overall benthic macrofaunal density was 871 ind./m$^{2}$. The density was highest in the middle part of the bay because Musculus senhousia (Bivalvia) and cumaceans (Crustacea) had their highest densities in some stations. Benthic polychaetes were comprised of 100 species with a mean density of 138 ind./m$^{2}$. Their abundances were higher in the inner bay, in the middle bay, and in the mouth of bay, but poor community structures were established in the whole bay. The dominant species over 1.0 percentage were composed of the total 21 species, and they occupied 78.3% of the total abundance of the benthic polychaetes. The most dominant species was Lumbrineris longifolia (9.3%), followed by Eteone longa (7.3%), Heteromastus filifomis (7.1%), Sternaspis scutata (6.1%). From the cluster analysis, the study area could be divided into three station groups. Station group AI was located in the inner bay and in the shallow coastal region, and its most dominant species was Heteromastus filiformis. At the station group AII in the mouth of bay and in some channel region, its most dominant species were Lumbrineris longifolia and Eteone longa. And at the station group B located in middle part of the bay, the most dominant specis was Sternaspis scutata. In comparison with previous studies, the benthic polychaetous community experienced great change in the view of species number, density and dominant species. The dominant species were Sternaspis scutata and Eteone longa, but their densities declined greatly. Instead of these species, Lumbrineris longifolia and Heteromastus filiformis, known as the potential organic enrichment indicator species, appeared to the new dominant species even if their low densities. These facts mean that Deugryang Bay was maintained yet as little organic enriched area compared to other bays on the coast of Korea, but needed some caution of marine environmental management.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.7 no.1
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• pp.8-19
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• 2002

Spatial distribution pattern of macrozoobenthos was studied along the salinity gradient and sedimentary environment in the Watancheon estuary, Beobseongpo, southwest coast of Korea. Ten stations were set from the mouth towards the head of estuary. Three replicate sediment samples were taken using a van Veen grab (surface area $0.1m^{2}$) at each station between June 1998 and January 1999. A total of 114 species were collected during the study period and they are composed of 44 species of polychaetes (39%), 34 of crustaceans (30%), 24 of molluscs (21%) and 12 of miscellaneous. The former two taxa together accounted for 69% in the total number of species. The mean density was 3,053 ind./m$^{2}$, comprising 2,536 ind./m$^{2}$ from polychaetes (83%) and 439 ind./m$^{2}$, crustaceans (14%). Moreover, the mean biomass was 58.23 gwwt./m$^{2}$, consisting of 29.56 gwwt./m$^{2}$ from polychaetes (51%), 23.38 gwwt./m$^{2}$, molluscs (40%). A spionid polychaete Minuspio japonica, two corophiid amphipods Grandidierella japonica and Corophium sinense, a bivalve Potamocorbula amurensis were major dominants at the head of estuary where the salinity was relatively lower compared with contiguous sites. The distributions of M. japonica and G. japonica were significantly related to the salinity and sediment environment, respectively, whereas C. sinense and P, amurensis showed no significance. The nereid polychaete, Hediste japonica, also predominated at the head of the estuary where bottom salinity was relatively low. Species diversity was high at the mouth area whereas low diversity and few species number were seen at the stations in the head of the estuary, influenced by freshwater and sandy sediment. Based on the cluster analysis, the macrobenthic community was classified into four station groups from head (station group A) toward mouth (group D) in the study area. The number of species and abundance between station group B and C were significantly different. And the abundance of between two neighboring station groups (station group A and B, B and C, C and D) was also different. These results suggested that the spatial distribution pattern of macrobenthos in this estuary seemed mainly related to gradients in bottom salinity and sediment grain size among environmental factors.

• Korean Journal of Environmental Biology
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• v.37 no.4
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• pp.664-671
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• 2019

This study was conducted to investigate the environmental impact of the construction of the Yeongju Dam, located near the upper stream of the Nakdong River, on benthic macroinvertebrates. The investigation was conducted four times from 2015 to 2016 and the composition of the benthic macroinvertebrate fauna from the four surveyed sites was compared. After the dam construction, the number of benthic macroinvertebrate species decreased and the species composition ratio of the E.P.T taxa(Ephemeroptera, Plecoptera, and Trichoptera) decreased, which favored the previous environment and the large riverbed structure. However, the species composition ratio of the O.C.H taxa (Odonata, Coleoptera, and Hemiptera), which favored the reservoir environment, increased. For the pattern of changes in the functional habitat groups, the proportion of 'Clinger(CL)' taxa decreased and the 'Burrower(BU), Climber(CB), Sprawler(SP), Swimmer(SW)' taxa increased in all surveys after the dam construction. A cluster stability comparison showed that the 'Stability Group II' species of St.2 and St.3 showed a drastic decrease. The average Benthic Macroinvertebrate Index(BMI) of all the survey sites in 2016 was lower than that in 2015. This research confirmed the temporal and spatial changes in the habitat type and community structure of the benthic macroinvertebrates resulting from the dam construction.