• Korean Journal of Ecology and Environment
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• v.37 no.2 s.107
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• pp.236-240
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• 2004

To examine the algicidal effect of co-treatment of biological control agent on centric diatom Stephanodiscus hantzschii in the filtered water, an endemic algicidal bacterium (Pseudomonas putida) and a heterotrich ciliate (Stentor roselli) were iso-lated from Pal'tang reservoir, Korea. Bacterial isolate and ciliate removed 98% and 80% of the diatom for 7 days of cultivation. Co-treatments of these two agents perfectly inhibited the diatom growth, compared to the single treatment of each agent. This synergistic interaction of the bacterium and ciliate could provide an effective tool in the biomanipulation to control the diatom bloom in freshwater lakes and streams.

• Ocean and Polar Research
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• v.39 no.4
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• pp.245-255
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• 2017

There are a number of pieces of evidences that suggest a link between marine diatoms and microorganisms, but knowledge about related microbial communities is greatly lacking. The present study investigated the microbial community structures related to the growth of the marine diatom Cyclotella meneghiniana. We collected free-living bacteria (FLB) and particle-associated bacteria (PAB) at each growth stage (e.g., lag, exponential, stationary and death) of the diatom, and analyzed their bacterial 16S rDNA using pyrosequencing. Metagenomics analysis showed that community structures of FLB and PAB differed considerably with the progress of growth stages. FLB showed higher diversity than PAB, but variation in the different growth stages of C. meneghiniana was more evident in PAB. The proportion of the genus Hoeflea, belonging to the order Rhizobiales, was dominant in both FLB and PAB, and it gradually increased with the growth of C. meneghiniana. However, Enhydrobacter clade tended to considerably decrease in PAB. In addition, Marinobacter decreased steadily in FLB, but first increased and then decreased in PAB. These results suggest that Hoeflea, Enhydrobacter, and Marinobacter may be closely related to the growth of diatom C. meneghiniana.

• ALGAE
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• v.23 no.4
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• pp.277-288
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• 2008

The relationship between nutrients and phytoplankton dynamics was investigated daily from 12 April to 22 July 2003 in Sagami Bay, Japan. According to multidimensional scaling (MDS) and cluster analysis, phytoplankton community was divided into four distinct groups. The first group was consisted of centric diatom species, such as Guinardia spp., Detonula spp., Letocylindrus danicus, Skeletonema costatum, Eucampia zodiacus and Chaetoceros spp.. The second and third clusters comprised mainly diatoms and dinoflagellates, respectively. The other cluster was restricted to the samples collected during the last sampling period when the rainfall and river discharge was frequently recorded. Canonical correspondence analysis (CCA) was applied to analyze four groups respectively, which focused on the effects of nutrients concentration and ratio on phytoplankton variations. Based on CCA analysis, most species of centric diatom were negatively correlated with DSi concentrations and Si/N ratio. Nutrients were strongly limited phytoplankton growth during the summer when the rainfall was not observed, whereas river discharge by rainfall and counterclockwise coastal currents (although the surface circulation pattern is often altered by Kuroshio Current, the counterclockwise coastal currents are generally dominant) has brought phytoplankton population accumulation and triggered the micoalgae growth in western part of the bay. Phosphorous (P) was strongly limited after significantly increases in the phytoplankton abundances. However, silicate (Si) was not a major limiting factor for phytoplankton production, since Si/DIN and Si/P ratio did not create any potential stoichiometric limitation. This indicates that high Si availability contributes favorably to the maintenance of diatom ecosystems in Sagami Bay.

• The Korean Journal of Ecology
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• v.8 no.1
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• pp.21-29
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• 1985

The physico-chemical properties of sediment, the species composition and biomass of benthic diatoms were investigated in the intertidal zone of Kum river estuary, from July 1983 to May 1984. Sandflat sediment was more oligotrophic than mudflat one. The diatom composition was primarily associated with sediment grain size. The dominant epipelic diatoms belonged to the centric diatoms such as Paralia sulcata and Thalassiosira spp., while the epipsammic diatoms consisted mainly of Achnanthes haukiana and Amphora sabyii. Diatom flora of sandflat was more significantly diverse than that of mudflat. Mean yearly crop of sandflat diatoms was 2.8 times greater than that of mudflat diatoms and peaked at March reflecting the greater availability of ammonia.

• ALGAE
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• v.18 no.4
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• pp.263-272
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• 2003

The composition of phytoplankton and periphyton community in Togyo reservoir was investigated. A total of phytoplankton was composed of 150 taxa, belonging to 6 phyla, 8 classes, 15 orders, 5 suborders, 31 families, 71 genera, 106 species, 14 varieties, 1 form and 29 unidentified species. The observed number of diatoms and green algae were much higher than others. Within diatoms the pennate diatoms appeared more than centric diatoms and solitary forms or colonial forms appeared more than filamentous forms in green algae. A total of epipelic algae was composed of 125 taxa, belonging to 3 phyla, 3 classes, 6 orders, 3 suborders, 13 families, 30 genera, 87 species, 29 varieties, 2 forms and 7 unidentified species. The diatoms appeared much more than others. Among those, the pennate diatoms dominated the centric diatoms in species number observed. A total of epilithic algae was composed of 114 taxa, belonging to 4 phyla, 4 classes, 11 orders, 3 suborders, 22 families, 38 genera, 79 species, 8 varieties, 1 form and 26 unidentified species. The observed number of diatoms and green algae were much higher than others. Within diatoms the pennate diatoms dominated the centric diatoms in species number observed. The dominance of pennate diatoms of the diatom community in the epipelic algal community and the epilithic algal community could be assumed that was due to the presence of raphe structure of pennate diatoms.

• ALGAE
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• v.24 no.3
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• pp.129-138
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• 2009

DNA-based discrimination of species is a powerful way for morphologically otherwise similar species, like centric diatoms. Here, the author sequenced long-range nuclear ribosomal DNAs, spanning from the 18S to the D5 region of the 28S rDNA, of Stephanodiscus, particularly including a Korean isolate. By comparisons, high DNA similarities were detected from the rDNAs of nine Stephanodiscus (>99.4% in 18S rDNA, >98.0% in 28S rDNA). Their genetic distances, however, were significantly different (Kruskal-Wallis test, p < 0.01) compared to two related genera, namely Cyclotella and Discostella. In addition, genetic distances of 18S rDNAs were significantly different (Student’s t-test, p = 0.000) against those of the 28S rDNAs according to individual genera (Cyclotella, Discostella, and Stephanodiscus). Phylogenetic analyses showed that Stephanodiscus and Discostella showed a sister taxon relationship, and their clade was separated from a cluster of Cyclotella (1.00 PP, 100% BP). This suggests that Stephanodiscus has highly conserved sequences of both 18S and 28S rDNA; however, Stephanodiscus is well-separated from other freshwater centric diatoms, such as Cyclotella and Discostella, at the generic level.

• Journal of Aquaculture
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• v.8 no.1
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• pp.47-58
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• 1995

Field studies on the seasonal succesion of phytoplankton population were carried out at the 25 stations of the breeding ground in Kogum-sudo, Southern coast of Korean peninsula in Feburuary, April, August and October, 1993. Sixty four species belonging to 40 genera were identified. Predominant species were mainly centric diatoms throughout the four seasons, two centric diatoms, Skeletonema costatum and Thalassiosira sp. and a pennate diatom, Thaiassionema nitzschioides in the winter; two pennate diatoms, Thaiassionema nitzschioides and Asterionella kariana, and especially a dinoflagellate, Heterocapsa triquetra (station 10) in the spring, two centric diatoms, S. costatum and Chaetoceros diadema in the summer; and a centric diatom, Rhizosolenia alata and a pennate diatom, Bacillaria paxillifer in the fall. The main red tide organisms in the breeding ground were dinoflagellates, Prorocentrum dentatum, P. minimum, P. triestinum, Ceratium furro, Gymnodinium sanguineum, Noctiluca scintillans, H. triquetra, Scrippsiella trichoidea and a diatom S. costatum in the Kogum Sudo. Seasonal phytoplankton cell numbers were in a wide range between $8.8\times10^3$ cells/l and 1.4\times10^6$ cells/l; The seasonal average cell numbers were $12.2\times10^4\pm5.9\times10^4$ cells/l $(mean\;\pm\;standard\; diviation)$ in the winter, $3.3\times10^4\pm1.4\times10^4$ cells/l in the spring, $48.4X10^4\pm40.0\pm10^4$ cells/l in the summer, and $3.6\times10^4\pm1.9\times10^4$ cells/l in the fall, respectively.

• ALGAE
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• v.30 no.2
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• pp.103-119
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• 2015

Photosynthetic rates of the large centric diatom Coscinodiscus granii were measured by means of multicolor variable chlorophyll fluorescence imaging, single cell $^{14}C$ assimilation, and optical $O_2$ sensor measurements during light acclimatization of cultures grown at five different irradiances: 50, 150, 235, 332, and $450{\mu}mol$ photons $m^{-2}\;s^{-1}$. Photo-acclimatization was evident from changes of cellular chlorophyll a content, growth rates, and light response curves. Each of the applied methods evaluates different parts and reactions in the photosynthetic apparatus, which makes a direct quantitative comparison of rates difficult, although a different degree of correlation were found between all three methods. However, when used in combination, they provide information about the internal relationship of photosynthetic pathways as well as the variation in photosynthetic capacity between individual cells within a single algal culture.

• ALGAE
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• v.25 no.2
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• pp.65-70
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• 2010

The genus Chaetoceros provides highly diversified diatoms in marine systems. Morphological descriptions of the genus are well-documented, yet the DNA taxonomy of Chaetoceros has not been satisfactorily established. Here, the molecular divergences of the 18S-28S rDNA of Chaetoceros were assessed. DNA similarities were relatively low in both 18S (93.1 $\pm$ 3.9%) and 28S rDNA (81.0 $\pm$ 4.6%). Phylogenies of the 18S, 28S rDNAs showed that Chaetoceros was divided according to individual species, clustering the same species into single clades. Statistical analysis with corrected genetic (p-) distance scores showed that nucleotide divergence of Chaetoceros 28S rDNA significantly differed from that of 18S rDNA (Student's t-test, p < 0.05). This finding suggests that the 28S rDNA may be treated as a more suitable marker for species-level taxonomic distinctions of Chaetoceros.

• Korean Journal of Ecology and Environment
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• v.47 no.4
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• pp.273-281
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• 2014

We conducted the weekly monitoring (December 2012~April 2013) to evaluate the temporal variation and identification of Stephanodiscus spp. that are generally dominant during winter in the Yeongsan River. Phytoplankton species were identified and counted using the optical microscope and scanning electron microscope (SEM). Phytoplankton in the river were grouped into 6 classes (bacillariophyceae, chlorophyceae, cryptophyceae, cyanophyceae, dinophyceae, euglenophyceae), 30 genus and 41 species. Phytoplankton composition showed high abundance of diatoms in winter and Aulacoseira sp., Cyclotella sp. and Stephanodiscus spp. were dominant. Among the species, Stephanodiscus spp. was relatively abundant compared to other diatom species. Stephanodiscus spp. appeared from December 2012 to April 2013 and their abundance peaked in January. Abundance of diatoms especially peaked ($21,080cells\;mL^{-1}$) in January 15, 2013 when Stephanodiscus spp. also bloomed ($20,560cells\;mL^{-1}$). The abundances of Stephanodiscus spp. were gradually decreased from March and reached as low as $60cells\;mL^{-1}$ in April 26. Cyclostephanos (C. invisitatus), Cyclotella (C. meneghiniana), Discostella (D. pseudostelligera, D. woltereckii) and Stephanodiscus (S. hantzschii, S. minutulus, S. parvus) were classified in the circular diatoms. Abundance of S. hantzschii was extremely high compared to S. minutulus and S. parvus.