• 제목/요약/키워드: cell alignment

검색결과 319건 처리시간 0.032초

Descriptor-Based Profile Analysis of Kinase Inhibitors to Predict Inhibitory Activity and to Grasp Kinase Selectivity

  • Park, Hyejin;Kim, Kyeung Kyu;Kim, ChangHoon;Shin, Jae-Min;No, Kyoung Tai
    • Bulletin of the Korean Chemical Society
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    • 제34권9호
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    • pp.2680-2684
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    • 2013
  • Protein kinases (PKs) are an important source of drug targets, especially in oncology. With 500 or more kinases in the human genome and only few kinase inhibitors approved, kinase inhibitor discovery is becoming more and more valuable. Because the discovery of kinase inhibitors with an increased selectivity is an important therapeutic concept, many researchers have been trying to address this issue with various methodologies. Although many attempts to predict the activity and selectivity of kinase inhibitors have been made, the issue of selectivity has not yet been resolved. Here, we studied kinase selectivity by generating predictive models and analyzing their descriptors by using kinase-profiling data. The 5-fold cross-validation accuracies for the 51 models were between 72.4% and 93.7% and the ROC values for all the 51 models were over 0.7. The phylogenetic tree based on the descriptor distance is quite different from that generated on the basis of sequence alignment.

약물처리된 심장세포의 세포 수축력 측정을 위한 병렬 폴리머 캔틸레버 제작 (Fabrication of a Parallel Polymer Cantilever to Measure the Contractile Force of Drug-treated Cardiac Cells)

  • 김동수;이동원
    • 센서학회지
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    • 제29권2호
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    • pp.100-104
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    • 2020
  • Thus far, several in vivo biosensing platforms have been proposed to measure the mechanical contractility of cultured cardiomyocytes. However, the low sensitivity and screening rate of the developed sensors severely limit their practical applications. In addition, intensive research and development in cardiovascular disease demand a high-throughput drug-screening platform based on biomimetic engineering. To overcome the drawbacks of the current state-of-the-art methods, we propose a high-throughput drug-screening platform based on 16 functional high-sensitivity well plates. The proposed system simulates the physiological accuracy of the heart function in an in vitro environment. We fabricated 64 cantilevers using highly flexible and optically transparent silicone rubber and placed in 16 independent wells. Nanogrooves were imprinted on the surface of the cantilever to promote cell alignment and maturation. The adverse effects of the cardiovascular drugs on the cultured cardiomyocytes were systematically investigated. The 64 cantilevers demonstrated a highly reliable and reproducible mechanical contractility of the drug-treated cardiomyocytes. Real-time high-throughput screening and simultaneous evaluation of the cardiomyocyte mechanical contractility under multiple drugs verified that the proposed system could be used as an efficient drugtoxicity test platform.

Inhibition of Myoblast Differentiation by Polyamine Depletion with Methylglyoxal Bis(guanylhydrazone)

  • Cho, Hwa-Jeong;Kim, Byeong-Gee;Kim, Han-Do;Kang, Ho-Sung;Kim, Chong-Rak
    • BMB Reports
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    • 제28권3호
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    • pp.191-196
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    • 1995
  • The role of polyamines in skeletal myoblast differentiation was investigated using the polyamine metabolic inhibitor methylglyoxal bis(guanylhydrazone)(MGBG). Concentrations of intracellular free spermidine and spermine increased 2 to 2.5-fold at the onset of myoblast fusion. The systhesis of actin, and creatine kinase activity both dramatically increased during myotube formation. However, MGBG at a concentration of 0.5 mM not only abolished the increase of intracellular free polyamines, but also reduced cell fusion to almost half the level of untreated cells, without noticeable morphological alteration. The production of actin, and creatine kinase activity were almost completely abolished by MGBG. The inhibition of myoblast fusion by MGBG was partially recovered with 0.1 mM of spermidine or spermine added externally. Results indicate that polyamines are necessary for normal myoblast differentiation. Since the first indication of myoblast differentiation is alignment of muscle cells and membrane fusion of adjacent cells, and since polyamine depletion completely inhibited the synthesis of actin, which might be associted with membranes, polyamine might be involved in myoblast differentiation through membrane reorganization events.

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흰쥐의 갑상선기능이 난소, 자궁 및 혈청 성 Steroid Hormone에 미치는 영향 (Effects of Thyroid function on Ovary, Uterus and Serum Concentrations of Steroid Hormone in Rats)

  • 서길웅;이규승;박창식
    • 한국가축번식학회지
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    • 제9권2호
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    • pp.113-123
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    • 1985
  • 1. The weights of ovary and uternus in the all treated groups were lighter than those in control group showing significantly differences from 4 weeks after treatment. The significant was not recognized between PTU and Thx. groups, and Thyro. and control groups. 2. In the histological changes of ovary, follicles were disa, pp.ared and alignment of membrana granulosa disnitergration in cell change were serious in Thx. and PTU groups and slight in Thyro. group. 3. In the histological changes of uterus, endometrial epithelium and lamina propria were atrophied from 3 weeks after treatment in Thx. group, from 4 weeks in PTU groups and from 5 weeks in Thyro. group. Muscular layers were atrophied with time elapse in the all treated groups. 4. The changes of the concentrations of serum progesterone at all observation times in Thx. and PTU groups were significantly decreased in comparison with those in control group. While those in Thyro. group were significantly increased in comparison with those in control group. 5. The concentration of serum estradiol-17$\beta$ at all observation times in all experimental groups were below 27.2pg/ml. Therefore, we did not detect any changes of the concentrations.

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The optical design method for dual-mode transflective LCD

  • Hsieh, C.H.;Sha, Y.A.;Su, P.J.;Chang, K.H.;Chen, C.H.;Hsiao, C.C.;Shiu, J.W.;Fuh, S.Y.;Cheng, W.Y.;Liao, Y.C.;Yang, J.C.;Lo, K.L.;Lee, D.W.;Lee, K.C.;Chang, Y.P.
    • 한국정보디스플레이학회:학술대회논문집
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    • 한국정보디스플레이학회 2006년도 6th International Meeting on Information Display
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    • pp.1529-1532
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    • 2006
  • Depending on the optical design method, a novel dual-mode transflective LCD with proper LC material and optical films was developed. The design increased the optical transmittance and the reflectivity of dual-mode transflective LCDs with the proper parameters of cell gap, alignment layer and optical films. These parameters were evaluated by computer simulation. The simulation results also revealed that the transmissive and reflective states presented similar performance in the transflective LCDs.

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A Metallurgical Study on Sputtered thin Film Magnet of high $_{i}\textrm{H}_{c}$ Nd-(Fe, Co)-B alloy and Magnetic

  • Kang, Ki-Won;Kim, Jin-Ku;Song, Jin-Tae
    • 한국재료학회지
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    • 제4권5호
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    • pp.535-540
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    • 1994
  • Thin film magnet was fabricated by radio frequency magnetron sputtering using $Nd_13/(Fe.Co)_{70}B_{17}$ alloy target and magnetic properties were investigated according to sputtering conditions from the metallurgical point of view. we could obtain the best preferred orientation of $Nd_2Fe_{14}B$ phase at substrate temperatures between $450^{\circ}C$ and $460^{\circ}C$ with the input power 150W, and thin films had the anisotropic magnetic properties. But, as the thickness of thin film increased, the c-axis orientation gradually tended to be disordered and magnetic properties also become isotropic. Just like Nd-Fe-B meltspun ribbon, the microstructure of thin film magnet was consisted of very find cell shaped $Nd_2Fe_{14}B$ phase and the second phase along grain boundary. While, domain structure showed maze patterns whose magnetic easy axis was was perpendicular to film plane of thin film. It was concluded from these results that the perpendicualr anisotropy in magnetization was attributed to the perpendicular alignment of very find $Nd_2Fe_{14}B$ grains in thin film.

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간섭 다중 접속 채널에서의 기회적 간섭 관리 기술 (Opportunistic Interference Management for Interfering Multiple-Access Channels)

  • 신원용;박도형
    • 한국통신학회논문지
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    • 제37B권10호
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    • pp.929-937
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    • 2012
  • 본 논문에서는 시불변 채널 계수를 가지는 다중 셀 상향링크 네트워크에서 세 가지 종류의 기회적 간섭 관리 기술을 소개한다. 첫째, 각 기지국에서 다른 기지국에게 최소한의 간섭을 발생시키는 사용자 집합을 기회적으로 선택하는 두 가지 기회적 간섭 관리 완화 기술을 제안하고, 자유도 측면에서 성능을 분석한다. 둘째, 각 기지국에서 두 개의 임계값을 기반으로 설계된 스케줄러로 사용자를 기회적으로 선택하는 분산 기회적 스케줄링을 제안하고, 용량 스케일링 측면에서 성능을 분석한다. 마지막으로, 모의실험을 통해 제안하는 기술을 검증한다.

Molecular Cloning and Tissue-specific Expression of the Melanocortin 4 Receptor Gene from Olive Flounder, Paralichthys olivaceus

  • Lee, Hye-Jung;Kim, Jong-Myoung
    • Fisheries and Aquatic Sciences
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    • 제13권4호
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    • pp.263-271
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    • 2010
  • G protein-coupled receptors (GPCR) constitute the largest superfamily of cell membrane receptors, mediating diverse signal-transduction pathways. The melanocortin 4 receptor (MC4R) has been of interest for its physiological role and size, one of the smallest among the GPCRs, which makes it a good model system for the structural study of GPCRs. To study the molecular structure and tissue-specific expression of MC4R in olive flounder (Paralichthys olivaceus), the full-length MC4R gene was obtained using PCR amplification of genomic DNA as well as cDNA synthesis. Sequence analysis of the gene indicates that 978 bp of the MC4R gene encodes 325 amino acids without introns. Sequence alignment with the MC4Rs from other fish shows the highest degree of identity (96%) between Paralichthys olivaceous and Verasper moseri, followed by Takifugu rubripes and Tetraodon nigroviridis (89%). RNA was isolated from various tissues to examine the tissue distribution of MC4R by using RT-PCR. The results showed major expression of MC4R in the liver, brain, and eye, which is consistent with the expression pattern in other fish belonging to the order Pleuronectiformes.

준탄성광산란을 이용한 0.3 $\mu\textrm{m}$ 폴리스티렌구의 평균지름 측정 불확도 향상 (Uncertainty improvement in measurement of mean diameter of 0.3-$\mu\textrm{m}$-diameter polystyrene sphere by using quasi-elastic light scattering)

  • 박병천;정명세
    • 한국광학회지
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    • 제9권4호
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    • pp.258-263
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    • 1998
  • 준탄성광산란(QELS)을 이용하여 지름이 0.3$\mu\textrm{m}$인 폴리스티렌구의 평균지름을 측정하였다. 폴리스티렌구가 표준입자로 사용되기 위하여는 평균지름의 불확도가 수 % 이내가 되어야 한다. 본 연구에서는 QELS장차중 시료용기의 정렬방법 및 온도측정방법을 특별히 보완하여 계통오차를 대폭 줄였다. 표준입자 인증물질인 NIST SRM 1691 (0.269$\pm$0.007$\mu\textrm{m}$: TEM; 0.275$\pm$0.007$\mu\textrm{m}$:QELS)을 측정하여 평균지름이 0.2730.006$\mu\textrm{m}$ 인 결과를 얻었다. 개선된 측정방법 및 측정불확도를 상세히 기술하였으며 NIST의 측정결과와 비교하였다.

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Isolation and characterization of unrecorded yeasts species in the family Metschnikowiaceae and Bulleribasidiaceae in Korea

  • Park, Yuna;Maeng, Soohyun;Srinivasan, Sathiyaraj
    • Journal of Species Research
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    • 제9권3호
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    • pp.198-203
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    • 2020
  • The goal of this study was to isolate and identify wild yeasts from soil samples. The 15 wild yeast strains were isolated from the soil samples collected in Pocheon city, Gyeonggi Province, Korea. Among them, four yeast stains were unrecorded, and 11 yeast stains were previously recorded in Korea. To identify wild yeasts, microbiological characteristics were observed by API 20C AUX kit. Pairwise sequence comparisons of the D1/D2 domain of the 26S rRNA were performed using Basic Local Alignment Search Tool(BLAST). Cell morphology of yeast strains was examined by phase contrast microscope. All strains were oval-shaped and polar budding and positive for assimilation of glucose, 2-keto-ᴅ-gluconate, N-acetyl-ᴅ-glucosamine, ᴅ-maltose and ᴅ-saccharose (sucrose). There is no official report that describes these four yeast species: one strain of the genus Kodamaea in the family Metschnikowiaceae and three strains of the Hannaella in the family Bulleribasidiaceae. Kodamaea ohmeri YI7, Hannaella kunmingensis YP355, Hannaella luteola YP230 and Hannaella oryzae YP366 were recorded in Korea, for the first time.