• 한국해양학회지
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• v.29 no.1
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• pp.5-16
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• 1994

Particulate biogenic silica (PBSi), diatom abundance and dissolved silicate were measured in the Nakdong River estuary from March, 1991 to April, 1992. The PBSi concentrations were in the range of 0.40∼11.45 ug-at/l with being relatively high in spring and fall. The concentrations were higher in inner Bay than in outer Bay. In vertical profiles, the concentrations showed maximum in the surface layer, decreasing with depth, and then increased slightly in the bottom layer. the PBPi concentrations were related with diatom abundances, but the relatively high ratios of PBSi concentrations were related with diatom abundances, but the relatively high ratios of PBPi to diatom abundance (ca.500 pgSi$.$cell/SUP -1/) suggest that there be much detrital PBSi. The source of dissolved silicate was the Nakdong River discharge and the dissolved silicate does not seem to be a limiting factor of diatom growth due to relatively high concentration during the study period. the silicate concentrations in the bottom layer seem to be related with the PBSi concentrations existed just before the sampling time in addition to river discharge. Relatively low ratios of PBSi to POC (average 0.2 gSi$.$gC/SUP -1/) and relatively high ratios of POC to chlorophyll a (ca. 900) suggest that much detrital POC comprise the total POC.

• Archives of Pharmacal Research
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• v.27 no.4
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• pp.422-428
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• 2004

Expressed sequence tags (ESTs) were generated from two 3'-directed CDNA libraries constructed from quiescent and activated rat hepatic stellate cell (HSC) to analyze the expression profiles of active genes in both cells. From quiescent and activated HSC, 694 ESTs and 779 ESTs, respectively, were obtained after excluding those having shorter than 30 bp. Amonq ESTs obtained from quiescent and activated HSC, 68 and 73 kinds of ESTs (186 clones and 236 clones), respectively, appeared more than once, implying that their genes are expressed highly in each cell type. 52 among 73 ESTs appeared only in the activated HSC 47 amonq 68 ESTs only in the normal HSC, and 21 in both cells. The genes of these 52 ESTs were assumed to be expressed more highly in the activated HSC. To confirm the high expression of genes of which the ESTs appeared more than twice in the activated HSC, northern hybridization was carried out with RNAs derived from rat normal and fibrotic liver using each of 18 EST DNAs as probe. 13 ESTs showed more intense bands with RNA isolated from the fibrotic liver than normal liver. From these results, we confirm the positive correlation between abundance of transcript in activated HSCs and the expression level in fibrotic liver, The expression profile of the transcripts serves as an important tool in understanding the biological properties of HSC.

• Molecules and Cells
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• v.40 no.2
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• pp.143-150
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• 2017

Homologous recombination (HR) is necessary for maintenance of genomic integrity and prevention of various mutations in tumor suppressor genes and proto-oncogenes. Rad51 and Rad54 are key HR factors that cope with replication stress and DNA breaks in eukaryotes. Rad51 binds to single-stranded DNA (ssDNA) to form the presynaptic filament that promotes a homology search and DNA strand exchange, and Rad54 stimulates the strand-pairing function of Rad51. Here, we studied the molecular dynamics of Rad51 and Rad54 during the cell cycle of HeLa cells. These cells constitutively express Rad51 and Rad54 throughout the entire cell cycle, and the formation of foci immediately increased in response to various types of DNA damage and replication stress, except for caffeine, which suppressed the Rad51-dependent HR pathway. Depletion of Rad51 caused severe defects in response to postreplicative stress. Accordingly, HeLa cells were arrested at the G2-M transition although a small amount of Rad51 was steadily maintained in HeLa cells. Our results suggest that cell cycle progression and proliferation of HeLa cells can be tightly controlled by the abundance of HR proteins, which are essential for the rapid response to postreplicative stress and DNA damage stress.

• Korean Journal of Microbiology
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• v.37 no.1
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• pp.80-84
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• 2001

Vertical and temporal variations of active and total bacterial abundance were monthly estimated in Lake Soyang from April 1999 to January 2000. The number of total and respiring bacteria was determined directly under microscope by AODC and CTC methods, respectively. The number of total and active bacteria varied from $2.1{\times}10^5 to 3.1{\times}10^6 $,$cells{\cdot}ml^{-1}$ and $1.8{\times}10^4 to 8.0{\times}10^5 $,$cells{\cdot}ml^{-1}$, respectively. The proportions of respiring bacteria to total cell ranged from 3.7 to 44.2% : The proportions was the highest in November 1999 and the lowest in December 2000. The specific activity of${\beta}$-glucosidase divided by total bacteria was$1.6{\times}10^5\;amol{\cdot}cell^{-1}{\cdot}hr^{-1}$in August and$1.4{\times}10^5\;amol{\times}cell^{-1}{\times}hr^{-1}$in September while the specific activity divided by CTC active bacteria was about$3.6{\times}10^5\;amol{\cdot}cell^{-1}{\cdot}hr^{-1},\;24.0{\times}10^5\;amol{cdot}cell^{-1}{cdot}hr^{-1}$. The specific activity of active bacteria in September was 6.7 times higher than that of August. By these data of active bacteria, the new information of aquatic ecosystem was unveiled.

• Fisheries and Aquatic Sciences
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• v.12 no.3
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• pp.227-235
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• 2009

The marine toxic dinoflagellate Alexandrium catenella has been implicated in numerous paralytic shellfish poisoning (PSP) events in many countries. Due to difficulties in rapidly identifying A. catenella, field-based study of this species has been problematic. The present study developed a TaqMan format A. catenella-specific probe for real-time PCR assay (specific to Korean genotype) based on LSU rDNA sequence information for studying geographic and temporal distribution of the species in surface sediments and water columns of Jinhae Bay, Korea. The field survey from 2007 to 2008 revealed that A. catenella occurred in most seasons at low densities, mostly below 1 cell $mL^{-1}$, and was more abundant in spring (maximum cell density of 2 cells $mL^{-1}$) when shellfish exceed the quarantine toxin level for PSP toxins in Jinhae Bay.

• Biomedical Science Letters
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• v.12 no.4
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• pp.385-391
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• 2006

Heterotrimeric GTP binding proteins (G proteins) mediate signals generated by neurotransmitters and hormones Among G proteins, Go is found in a large quantity in brain and growth cone membranes of neurons. In spite of its abundance in neurons, the role of Go is not fully understood. In our previous study, we identified promyelocytic leukemia zinc finger protein (PLZF) as an interacting partner of alpha subunit of Go ($Go{\alpha}$) and confirmed their interaction employing several biochemical assays. To date, it is reported that PLZF functioned as a cell growth suppressor and a transcription repressor. To determine effect of $Go{\alpha}$ and PLZF interaction on the cellular function of PLZF, we performed luciferase reporter gene assay and BrdU incorporation assay. Co-expression of $Go{\alpha}$ and PLZF synergistically increased the effect of PLZF alone. These results suggest that $Go{\alpha}$ may act as cellular activator of PLZF. This novel feature of Go may provide insights into understanding diverse role of Go-coupled receptor as well as its cellular actions.

• Korean Journal of Ecology and Environment
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• v.34 no.3 s.95
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• pp.141-152
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• 2001

Abundance of autotrophic picoplankton (APP) and their contribution to phytoplankton biomass were assessed in seven brackish lagoons and five freshwater reservoirs in the summer season. Phycocyanin-rich picocyanobacteria dominated APP in lagoons, while phycoerythrin-rich picocyanobacteria dominated APP in freshwater reservoirs. The cell density of APP ranged from $3.6{\times}10^3$ to $5.0{\times}10^6\;cells/ml$ (median $2.5{\times}10^5$) in brackish lagoons and from $3.8{\times}10^4$ to $3.6{\times}10^5\;cells/ml$ (mdian $1.3{\times}10^5$) in reservoirs. Carbon biomass ranged from 1.0 to $1,385.0\;{\mu}gC/L$ in lagoons and from 15.3 to $128.2\;{\mu}gC/L$ in reservoirs. APP cell density in Lake Kyungpo was over $10^6\;cells/ml$in all three surveys, which is one of the highest values recorded in all over the world. During the thermal stratification in Lake Soyang, the maximum abundance of APP and their maximum contribution to phytoplankton biomass were observed near the thermocline. This study showed that APP sometimes can contribute significantly to phytoplankton biomass both in lagoons and reservoirs with the range from 0.1 to 85.0%. APP which have been overlooked in the past studies appears to be important primary producers in Korean lake ecosystem.

• Korean Journal of Environmental Biology
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• v.24 no.1 s.61
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• pp.81-88
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• 2006

The cell abundance and marker pigment distribution patterns of picophytoplankton in the Chuuk Lagoon, tropical South Pacific, were analyzed flow cytometry and HPLC. Also, respective contribution of Synechococcus, Prochlorococcus and picoeukaryotes on estimated carbon biomass was evaluated. Synechococcus and Prochlorococcus showed contrasting distributional patterns in the waters of Chuuk Lagoon. Relatively high concentration of Synechococcus was observed near Weno Island but the concentration decreased toward the Northeast Passage. However, Prochlorococcus showed an opposite distributional pattern. Picoeukaryotes did not show any significant variable difference. The range of divinyl chlorophyll a (Chl. $\alpha$) concentration, marker pigment of Prochlorococcus, was $1.2\sim180.3\;ng\;L^{-1}$ and higher concentrations were observed at the stations near the Northeast Passage than stations near Weno Island. This pigment pattern was similar to cell abundance pattern indicating that chi. a2 may be a useful biomass indicator. On the other hand, the range of zeaxanthin concentrations was $61.4\sim135.8\;ng\;L^{-1}$ showing comparatively less significant variation indicating zeaxanthin influence derived from Prochlorococcus. Estimated carbon biomass of Synechococcus contributed 68% of total picophytoplankton biomass. Prochlorococcus and picoeukaryotes respectively contributed 17.1% and 14.9% of total picophytoplankton biomass.

• Journal of the korean society of oceanography
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• v.31 no.4
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• pp.196-206
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• 1996

Vertical profiles of the chlorophyll ${\alpha}$, phytoplankton abundance, nutrients and sigma-t were compared with the vertical distribution of phytoplankton species in conjunction with $^{14}$C primary production in the Southern Waters of the East Sea, Korea. In the upper mixed layer the water column was only weakly stratified and ambient nitrogenic nutrient concentrations were markedly depleted. Dissolved silicate seemed to be another limiting nutrient in the surface layer. The occupation of different water depths by several dominant diatom species was well explained by the degree of silicification of each cell and the silicate concentration of ambient seawater. Subsurface chlorophyll maxima were continuously observed in the lower parts of the euphotic layer and the depth coincided with nutricline, supporting our view that chlorophyll maximum was sustained partially by enhancement of in situ growth of phytoplankton and partially by increase of cellular chlorophyll content. The persistence of chlorophyll maximum layer was attributed to the physiological adaptation of the phytoplankters to low light intensities and to the utilization of regenerated nutrients. Integrated water column production of organic matter by photosynthesis appeared to be better related to phytoplankton cell division than to the cell growth in terms of biosynthesis of pigments and other intracellular components.

• Journal of Animal Science and Technology
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• v.54 no.6
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• pp.419-425
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• 2012

The coordinated action of the detrusor muscle cells in the urinary bladder is governed by cell-cell communication through gap junction, consisted of connexin (Cx) molecules. Even though a number of researches have been mostly focused on expressional changes of a few Cx isoforms in clinically dysfunctional condition of the bladder, less attention has been paid for investigation of Cx isoforms present in the bladder. Using real-time PCR analysis, the present study examined Cx isoforms expressing in the male rat bladder during postnatal period. Also, expressional patterns of Cx isoforms were evaluated in the bladder at different postnatal ages. Of a total of 13 Cx isoforms tested in the present study, we were able to detect mRNAs of 6 Cx isoforms in the rat urinary bladder, including Cxs 31, 31.1, 32, 37, 40, and 45. The transcript levels of Cxs 31, 31.1, 37, 40, and 45 were gradually increased from 1 week of age until 25 days of age, followed by transient decreases at 45 days of age. However, abundance of Cx32 transcript was drastically increased at 15 days of age, followed by a sharp drop at 45 days of age. These results indicate that differential expression of Cx isoforms in the bladder during postnatal development would be necessary for maintaining proper function of the bladder. A question remains to be answered if significant decreases of transcript levels of some Cx isoforms at the elderly are associated with age-dependent dysfunction of the bladder.