• Title/Summary/Keyword: breeding population

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Genetic Structure of the Mulberry Silkworm Population in Sri Lanka: I. Estimation of Combining Ability and Heritability

  • Lea, Ho-Zoo;Alwis, Siriani-M.de
    • Journal of Sericultural and Entomological Science
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    • v.37 no.1
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    • pp.10-15
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    • 1995
  • Genetic characterization of Sri Lankan silkworm bivoltine population has not been at-tempted so far, since its sporadic introduction of bivoltine strains into the island, starting from the 1950's. Genetic structure of Sri Lankan population of mulberry silkworm Bombyx mori was investigated through estimation of general (GCA) and specific combining ability(SCA) and heritability(${h^2}_B$), on the economic quantitative characters from leading 8 inbreds and their 28 F1's in a half diallel cross, in an attempt to utilize the estimates in determination of future breeding methods and to predict the breeding value over the phenotypic value. It was found that the breeding population of the bivoltine silkworm in Sri Lanka has still maintained considerable amounts of additive gene action as well as nonadditive. For some time in the future, both breeding strategies of "selection without inbreeding" and also "inbreeding followed by crossing" should therefore be effective in genetic improvement of economic characters investigated. In addition, superior combiners in general and in specific F1′s were identified for each of 6 economic characters, to be immediately utilized in selection and also in cross breeding programs in Sri Lanka.

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Genetic characteristics of Pacific abalone, Haliotis discus hannai in Dokdo Island, Korea (독도연안에 서식하는 전복의 유전학적 특성)

  • Park, Choul-Ji;Lee, Jeong-Ho;Noh, Jae-Koo;Kim, Hyun-Chul;Min, Byoung-Hwa;Myeong, Jeong-In
    • The Korean Journal of Malacology
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    • v.25 no.3
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    • pp.197-201
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    • 2009
  • This study was conducted to investigate the genetic characteristics of wild population of Pacific abalone, Haliotis discus hannai in Dokdo island. We used six polymorphic microsatellite marker to investigate the genetic diversity and population structure. The loci Hdh1321 and Hdh512 had the highest number of allele (34 and 22 respectively) and loci Hdh145 and Awb083 had the lowest (5 and 7 respectively). The mean number of allele per locus was 14.8. The average observed and expected heterozygosities were 0.664 and 0.824 respectively, and the average $F_{IS}$ was 0.195. We compared the population genetic parameters of Dokdo population with previously published data of the same species. At the result, the parewise $F_{ST}$ test showed significant difference between the Dokdo population and six populations (published data), suggesting that the genetic relationship of Dokdo population was separated from six populations.

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Variation in Breeding Burrows of Streaked Shearwaters Breeding in Sasu Island, and Predation Rates by Norway Rats (사수도에 번식하는 슴새의 둥지 사용률의 변화 및 집쥐의 포식률)

  • Nam, Ki-Baek;Lee, Kyung-Gyu;Hwang, Jae-Woong;Yoo, Jeong-Chil
    • Ocean and Polar Research
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    • v.36 no.1
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    • pp.49-57
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    • 2014
  • The seabird plays an important role as one of the indicator species for the status of and changes within marine ecosystems. Therefore, the conservation of seabirds and their habitats is important for maintaining the structure and function of marine ecosystems. Biological invasions affect most ecosystems on oceanic islands. In particular, Rattus spp. is the invasive species with the greatest impact on the seabird population. Introduced predators, like rats, severely affect seabirds and endanger them worldwide. The breeding population of Streaked Shearwaters Calonectris leucomelas in Sasu Island is one of biggest seabird colonies in Korea, and the Norway Rat Rattus norvegicus is known as an alien predator in this island. In this study we investigated rates of burrow occupancy and breeding success of Streaked Shearwaters for 7 years, and the impact of Norway Rats on the breeding success of Streaked Shearwaters breeding in Sasu Island for 4 years. Our results show that the percentage of breeding burrows decreased according to breeding stage during several years in the monitoring period, and that predation by the Norway Rat was the main cause in hatching failures. Consequently, although our results indicate that their breeding population is not likely to decline, Norway Rats have been affecting the breeding status of Streaked Shearwaters on Sasu Island during the last decade.

Genetic diversity and population structure of rice accessions from South Asia using SSR markers

  • Cui, Hao;Moe, Kyaw Thu;Chung, Jong-Wook;Cho, Young-Il;Lee, Gi-An;Park, Yong-Jin
    • Korean Journal of Breeding Science
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    • v.42 no.1
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    • pp.11-22
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    • 2010
  • The population structure of a domesticated species is influenced by the natural history of the populations of its pre-domesticated ancestors, as well as by the breeding system and complexity of breeding practices implemented by humans. In the genetic and population structure analysis of 122 South Asia collections using 29 simple sequence repeat (SSR) markers, 362 alleles were detected, with an average of 12.5 per locus. The average expected heterozygosity and polymorphism information content (PIC) for each SSR locus were 0.74 and 0.72,respectively. The model-based structure analysis revealed the presence of three clusters with the 91.8% (shared > 75%) membership, with 8.2% showing admixture. The genetic distances of Clusters 1-3 were 0.55, 0.56, and 0.68, respectively. Polymorphic information content followed the same trend (Cluster 3 had the highest value and Cluster 1 had smallest value), with genetic distances for each cluster of 0.52, 0.52, and 0.65, respectively. This result could be used for supporting rice breeding programs in South Asia countries.

The Morphological Study of Wild and Farmed Olive Flounder (Paralichthys olivaceus): The Role of Indirect Selection within and between Populations

  • Park, Jong-Won;Lee, Young-Mee;Noh, Jae-Koo;Kim, Hyun-Chul;Park, Choul-Ji;Hwang, In-Joon;Kim, Sung-Yeon;Lee, Jeong-Ho
    • Development and Reproduction
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    • v.16 no.4
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    • pp.309-314
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    • 2012
  • This study was conducted to analyze the difference of body types within and between wild and farmed populations of olive flounder Paralichthys olivaceus using measured records of morphological traits. The results showed that surveyed traits and standard deviation were $1,355{\pm}742g$ of body weight, $48.01{\pm}7.79cm$ of total length, and $40.96{\pm}6.80cm$ of body length. Also body height, body shape index and condition factor were $17.19{\pm}3.43cm$, $9.99{\pm}0.74$ and $11.16{\pm}1.54$, respectively. As result of least squares mean and standard error for each trait assumed in this study, those of farmed population showed significantly higher than those of wild population in all traits, exclusively in total length and body length (p<0.01). Particularly, the values of the body height and the body weight of the farmed population were higher than those of the wild population in the same total length. And the phenotypic correlation coefficients of the body weight, the total length, the body length and the body height showed strong positive correlation in all populations. These result suggested that morphological differences exist in farmed and wild flounder. Therefore, introduction of wild flounder is essential for the future production to improve the body type of farmed flounder, and parental fish should be chosen by considering selection of commercially important traits in the production process.

Comparative Analysis of the Korean Population of Magnaporthe oryzae by Multilocus Microsatellite Typing

  • Choi, Jaehyuk;Kim, Hyojung;Lee, Yong-Hwan
    • The Plant Pathology Journal
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    • v.29 no.4
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    • pp.435-439
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    • 2013
  • Rice blast fungus, Magnaporthe oryzae, inflicts serious damage to global rice production. Due to high variability of this fungal pathogen, resistance of newly-released rice cultivars is easily broken down. To understand the population structure of M. oryzae, we analyzed the genetic diversity of the Korean population using multilocus microsatellite typing. Eleven microsatellite markers were applied to the population of 190 rice isolates which had been collected in Korea for two decades since the 1980's. Average values of gene diversity and allele frequency were 0.412 and 6.5, respectively. Comparative analysis of the digitized allele information revealed that the Korean population exhibited a similar level of allele diversity to the integrated diversity of the world populations, suggesting a particularly high diversity of the Korean population. Therefore, these microsatellite markers and the comprehensive collection of field isolates will be useful genetic resources to identify the genetic diversity of M. oryzae population.

EFFECT OF BREEDING LENGTH ON GENETIC IMPROVEMENT IN JAPANESE HOLSTEIN POPULATION

  • Terawaki, Y.;Shimizu, H.;Fukui, Y.
    • Asian-Australasian Journal of Animal Sciences
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    • v.9 no.4
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    • pp.363-370
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    • 1996
  • The effect of breeding length of sire on genetic progress was examined in the Holstein dairy cattle population in Japan. Genetic progress was extimated by gene flow method. Breeding length of sires directly influences the replacement rates of sires and the selection intensity of sires because there are a fixed number of progeny tested young bulls per year. As breeding length of sires increased, rate of gene flow decreased and average proportions of genes deriving from selected animals had lower asymptotic values. When breeding length was short, average proportions of genes required a longer period to converge to asymptotic values. Changes of Rcow-sire's(sire to breed recorded cows) and Ncow-sire's(sire to breed non recorded cows) breeding length influenced not only transmission of their genes but also that of genes derived from all other selected animals. Irrespective of whether the discount rate was assumed to be 0 or 6%, longer term (${\geq}$ 20 years) expected total genetic improvement was maximized by a sire breeding length of five years. For shorter term assessment(10 years), genetic improvement was maximized by a sire breeding length of three years. There was a linear increase in the contribution of the sire to bulls pathway to the total genetic improvement, with increase in the term of assessment.

Assessment of Genetic Diversity and Population Structure on Kenyan Sunflower (Helianthus annus L.) Breeding Lines by SSR Markers

  • Mwangi, Esther W.;Marzougui, Salem;Sung, Jung Suk;Bwalya, Ernest C.;Choi, Yu-Mi;Lee, Myung-Chul
    • Korean Journal of Plant Resources
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    • v.32 no.3
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    • pp.244-253
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    • 2019
  • In crop breeding program, information about genetic dissimilarity on breeding resources is very important to corroborate genealogical relationships and to predict the most heterozygotic hybrid combinations and inbred breeding. This study aimed to evaluate the genetic variation in Kenyan sunflower breeding lines based on simple sequence repeat (SSR). A total of 83 alleles were detected at 32 SSR loci. The allele number per locus ranged from 2 to 7 with an average of 2.7 alleles per locus detected from the 24 sunflower accessions and the average value of polymorphic information contents (PIC) were 0.384. A cluster analysis based on the genetic similarity coefficients was conducted and the 24 sunflower breeding resources were classified into three groups. The principal coordinates (PCoA) revealed 34% and 13.38% respectively, and 47.38% of total variation. It was found that the genetic diversity within the Kenyan sunflower breeding resources was narrower than that in other sunflower germplasm resources, suggesting the importance and feasibility of introducing elite genotypes from different origins for selection of breeding lines with broader genetic base in Kenyan sunflower breeding program.

Change in nest site and population size of great cormorants (Phalacrocorax carbo) in relation to different Ardeidae species in inland breeding sites in Korea

  • Lee, Hyun-Jeong;Yi, Jin-Hee;Sung, Ha-Cheol
    • Journal of Ecology and Environment
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    • v.43 no.3
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    • pp.282-288
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    • 2019
  • We investigated the changes in the population size and inter-specific space usage for breeding in mixed breeding sites of the great cormorant (Phalacrocorax carbo), grey heron (Ardea cinerea), great egret (Ardea alba modesta) and intermediate egret (Egretta intermedia) in Gammul-myeon, Goesan-gun, Chungcheongbuk-do, South Korea, in 2016-2017. These species bred in two adjacent habitats (site A and site B). The number of breeding pairs of all species and the size of the breeding area at site B increased in 2017. In 2017, great cormorants at site B occupied the breeding sites previously occupied by the other species in 2016, while the grey heron and great egret occupied the sites around the great cormorant breeding site. The heights of nest trees and nests of great cormorant and grey heron did not differ temporally, but these heights in site B were significantly higher than those in site A for great cormorants. For great egrets, these greatly decreased in site B in 2017. Thus, the great cormorant either moved to favourable nest sites for breeding success or selected nest sites used by the herons in the previous year. Further studies of these two possibilities are necessary.

Entering and Exiting Routes of Hynobius leechii to a Breeding Site and Staying Time within the Site

  • Sung, Ha-Cheol;Lee, Jung-Hyun;Park, Dae-Sik
    • The Korean Journal of Ecology
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    • v.28 no.5
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    • pp.237-243
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    • 2005
  • To study entering and exiting routes of male and female Hynobius leechii to a breeding site and staying time of them within the breeding site, we monitored a breeding population located in the research forests of Kangwon National University. The breeding site was surrounded by a drift fence associated with nine pitfall traps. The breeding season of this population was about one month, from 16 March to 13 April, 2005. Breeding males arrived earlier at the breeding pond than females did. The operational sex ratio (OSR), defined as the ratio of males to females which are ready to mate, over a breeding season was female-biased as 0.67 male vs 1 female (57 males vs 87 females), but daily OSRs, OSR in a particular day, within the breeding pond were male-biased with $1.36\sim7.5$ male vs f female in six days out of seven investigated days. While breeding males stayed in the breeding pond for about 11 days, breeding females left the pond as soon as they completed oviposition. However, the females stayed at terrestrial areas near the pond for about seven days before completely leaving the breeding site. Entering and exiting routes to the breeding site were different between males and females, and between ovulated and oviposited females. Both males and females arrived earlier at the breeding site stayed longer within the site. Males stayed longer within the breeding site lost more body weight.