• 제목/요약/키워드: biological information processing

검색결과 275건 처리시간 0.028초

생명과학 지식의 가공과 콘텐츠화 과정에 대한 연구 (Considerations on the Making of Scientific Content and Processing of Biological Knowledge)

  • 안선영;김산하;장이권
    • 한국콘텐츠학회논문지
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    • 제11권11호
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    • pp.503-513
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    • 2011
  • 일반인들의 자연에 대한 감상과 생명과학의 이해는 오늘날 과학의 대중화에서 큰 역할을 차지하고 있다. 특히 일반인의 관심이 높은 전시와 같은 비형식 과학교육은 생태학, 동물행동학, 환경학 등 거시생물학적 분야의 내용이 주를 이루고 있다. 그렇지만 전문가의 참여 부재, 자연 현상의 피상적인 기술 등의 이유로 대중에게 효과적으로 전달되고 있지 않다. 정보와 지식은 그 자체로는 수용자가 곧바로 이해하고 받아 들일 만한 형태 및 구조를 가지지 못하다. 생명과학 지식을 일반인에게 효과적으로 전달하기 위해서는 콘텐츠를 유형별로 분류하고 콘텐츠화 하는 가공 과정이 필요하다. 주제의 선정 단계에서부터 내용의 편집 및 표현 단계까지의 일련의 과정으로서 관련 분야의 전문가인 과학자의 적극적인 역할이 강조된다. 콘텐츠화 과정은 과학적, 논리적 사고방식과 더불어 예술적 표현 및 소통 능력을 필요로 한다. 과학의 대중화를 위한 이론적 및 실천적 틀로서 통역의 개념을 제안한다.

전산모형 및 공간정보시스템을 결합한 지하환경관리시스템의 개발 및 적용 (A Subsurface Environment Management System Combining Computational Model and Spatial Information System)

  • 김준현;한영한
    • 환경영향평가
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    • 제10권2호
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    • pp.99-108
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    • 2001
  • This study was performed to develop an information processing system for the sound conservation of soil and groundwater resources. The system contains numerical models and geographic information systems for underground flow and contamination. Multidimensional Finite Element Model for Subsurface Environment (MFEMSE) was invented to analyze underground flow and pollution problems of water and gas phases. Newly developed and conventional models (MODFLOW, MOC3D, MT3D, PMPATH, PEST, UCODE) were integrated with GIS (ArcView) for the construction of an integrated information management system of subsurface environment. This system was applied to the management of three mineral water companies located in clean high mountain basin. Desirable management criteria and operational strategies were suggested using this system. The system was constructed to be applied for the broad sense of decision supporting tools in related topics of this study, so that it can be used not only for the prevention regulations, but also for clean up projects.

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Manganese-Enhanced MRI Reveals Brain Circuits Associated with Olfactory Fear Conditioning by Nasal Delivery of Manganese

  • Yang, Ji-ung;Chang, Yongmin;Lee, Taekwan
    • Investigative Magnetic Resonance Imaging
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    • 제26권2호
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    • pp.96-103
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    • 2022
  • Purpose: The survival of organisms critically depends on avoidance responses to life-threatening stimuli. Information about dangerous situations needs to be remembered to produce defensive behavior. To investigate underlying brain regions to process information of danger, manganese-enhanced MRI (MEMRI) was used in olfactory fear-conditioned rats. Materials and Methods: Fear conditioning was conducted in male Sprague-Dawley rats. The animals received nasal injections of manganese chloride solution to monitor brain activation for olfactory information processing. Twenty-four hours after manganese injection, rats were exposed to electric foot shocks with odor cue for one hour. Control rats were exposed to the same odor cue without foot shocks. Forty-eight hours after the conditioning, rats were anesthetized and their brains were scanned with 9.4T MRI. Acquired images were processed and statistical analyses were performed using AFNI. Results: Manganese injection enhanced brain areas involved in olfactory information pathways in T1 weighted images. Rats that received foot shocks showed higher brain activation in the central nucleus of the amygdala, septum, primary motor cortex, and preoptic area. In contrast, control rats displayed greater signals in the orbital cortex and nucleus accumbens. Conclusion: Nasal delivery of manganese solution enhanced olfactory signal pathways in rats. Odor cue paired with foot shocks activated amygdala, the central brain region in fear, and related brain circuits. Use of MEMRI in fear conditioning provides a reliable monitoring technique of brain activation for fear learning.

모티프 자원에 대한 통합 접근 검색 메소드 구현 (Implementation of Integrated search method for Motif Resources)

  • ;이범주;류근호
    • 한국정보처리학회:학술대회논문집
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    • 한국정보처리학회 2006년도 춘계학술발표대회
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    • pp.3-6
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    • 2006
  • Motif which is a recurrent feature shared by a significant segments from the proteins belonging to different families can be used to predict functional or structural properties of the protein, or to describe features common to biologically related proteins. Although there are many existed motif databases, they are unstandardized and built up by different methods. so it is difficult to get enough motif information when researches use motif databases for classification, prediction, etc. Using logical integration of biological based on cross-references between these databases is the common solution for information tracking through www. However, the problem such as the motif resource tracking method for making a united motif information page emerges from cross-reference. In this paper we propose the motif resource tracking method based on the existed motif databases for easy and comfortable interface better than in the case of using each motif database. The result which is given by this method is the review of necessary information about any motif in PROSITE database.

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실시간처리를 위한 태아심음 추출 알고리듬 (Fetal heart rate estimation algorithm for real-time processing)

  • 이응구;이용희;김선일;이두수
    • 대한의용생체공학회:학술대회논문집
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    • 대한의용생체공학회 1994년도 춘계학술대회
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    • pp.96-99
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    • 1994
  • Despite the simplicity of processing, a conventional autocorrelation function(ACF) method for the precise determination of fetal heart rate (FHR) has many problems. In case of weak or noise corrupted Doppler ultrasound signal. the ACF method is very sensitive to the threshold level and data window length. It is very troublesome to extract FHR when there is a data loss. To overcome these problems, the high resolution pitch detection algorithm was adopted to estimate the FHR. This method is more accurate, robust and reliable than the ACF method. With a lot of calculation, however, it is impossible to process real time FHR estimation. This paper is presented a new FHR estimation algorithm for real time processing.

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Applications of Microfluidics in the Agro-Food Sector: A Review

  • Kim, Giyoung;Lim, Jongguk;Mo, Changyeun
    • Journal of Biosystems Engineering
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    • 제41권2호
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    • pp.116-125
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    • 2016
  • Background: Microfluidics is of considerable importance in food and agricultural industries. Microfluidics processes low volumes of fluids in channels with extremely small dimensions of tens of micrometers. It enables the miniaturization of analytical devices and reductions in cost and turnaround times. This allows automation, high-throughput analysis, and processing in food and agricultural applications. Purpose: This review aims to provide information on the applications of microfluidics in the agro-food sector to overcome limitations posed by conventional technologies. Results: Microfluidics contributes to medical diagnosis, biological analysis, drug discovery, chemical synthesis, biotechnology, gene sequencing, and ecology. Recently, the applications of microfluidics in food and agricultural industries have increased. A few examples of these applications include food safety analysis, food processing, and animal production. This study examines the fundamentals of microfluidics including fabrication, control, applications, and future trends of microfluidics in the agro-food sector. Conclusions: Future research efforts should focus on developing a small portable platform with modules for fluid handling, sample preparation, and signal detection electronics.

Design of a Low-cost Active Dry Electrode Module for Single Channel EEG Recording

  • Byeon Jong-Gil;Jin Kyung-Soo;Park Byoung-Woo
    • 대한의용생체공학회:의공학회지
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    • 제26권1호
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    • pp.49-54
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    • 2005
  • This paper presents a design of 1-channel active dry electrode module for EEG from one's forehead. The IA(instrumentation amplifier) circuit inside the module is based on the configuration sown on the paper MettingVanRijn et al. We analyze the IA circuit to find out the related equation, and then compare its simulated characteristic with the result obtained from the real active dry electrode circuit. With the active dry electrode and the wet(Ag/AgCI) electrode connected to the separated analog processing module on one's forehead at the same time, their real time and FFT outputs of EEG are examined for comparison. The active dry electrode module has advantages over the wet electrode and its analog processing module: 1) The size of the analog processing circuit of the active dry electrode module is smaller than that of existing EEG analog processing module; 2) the total cost required to make the proposed analog processing circuit is much lower than that of the existing circuit, since the designed circuit needs smaller parts; 3) the electrical characteristic is comparable to the general EEG analog processing module even if the designed module has simpler circuit configuration.

샐룰라 오토마타 기법을 이용한 신경망의 자동설계에 관한 연구 (A Study on Automatic Design of Artificial Meural Networks using Cellular Automata Techniques)

  • 이동욱;심귀보
    • 전자공학회논문지S
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    • 제35S권11호
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    • pp.88-95
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    • 1998
  • 본 논문은 인공생명 기법을 이용하여 생물의 정보처리 시스템을 구현하고자 하는 것이다. 자연계의 생물은 그 자체로 훌륭한 정보처리 시스템이다. 생물체는 하나의 생식 세포로부터 발생된다. 또한 이 개체의 종은 진화의 과정을 통해 환경에 적응한다. 본 논문에서는 이와 같은 생물학적인 발생과 진화의 개념을 이용하여 신경망을 설계하는 방법을 제안한다. 생물체의 개체발생은 발생모델의 하나인 셀룰라 오토마다(CA)를 통하여 구현하였고 진화과정은 진화 알고리즘(EAs)을 사용하였다. 우리는 이와 같이 구현한 '진화하는 셀룰라 오토마타 신경망'을 줄여서 ECANS1이라 명명하였다. 셀 사이의 연결은 CA 법칙에 의하여 결정되며, 셀의 초기 패턴이 진화함으로써 유용한 신경망을 찾아낸다. 신경망의 각 셀 즉 뉴런은 생물의 발화 ${\cdot}$ 비발화의 특성을 갖는 카오스 뉴런 모델을 사용하였다. 그리고 신경마의 최종 출력값은 뉴런의 발화 빈도로서 나타내었다. 제안한 방법은 Exclusive-OR 문제 및 패리티 문제에 적용함으로써 그 유효성을 검증하였다.

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물체 형상인식 알고리즘을 이용한 물고기 로봇 위치 검출에 관한 연구 (A Study of Detecting The Fish Robot Position Using The Object Boundary Algorithm)

  • 아마르나 바르마 앙가니;강민정;신규재
    • 한국정보처리학회:학술대회논문집
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    • 한국정보처리학회 2015년도 추계학술발표대회
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    • pp.1350-1353
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    • 2015
  • In this paper, we have researched about how to detect the fish robot objects in aquarium. We had used designed fish robots DOMI ver1.0, which had researched and developed for aquarium underwater robot. The model of the robot fish is analysis to maximize the momentum of the robot fish and the body of the robot is designed through the analysis of the biological fish swimming. We are planned to non-external equipment to find the position and manipulated the position using creating boundary to fish robot to detect the fish robot objects. Also, we focused the detecting fish robot in aquarium by using boundary algorithm. In order to the find the object boundary, it is filtering the video frame to picture frames and changing the RGB to gray. Then, applied the boundary algorithm stand of equations which operates the boundary for objects. We called these procedures is kind of image processing that can distinguish the objects and background in the captured video frames. It was confirmed that excellent performance in the field test such as filtering image, object detecting and boundary algorithm.

PROTOTYPE AUTOMATIC SYSTEM FOR CONSTRUCTING 3D INTERIOR AND EXTERIOR IMAGE OF BIOLOGICAL OBJECTS

  • Park, T. H.;H. Hwang;Kim, C. S.
    • 한국농업기계학회:학술대회논문집
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    • 한국농업기계학회 2000년도 THE THIRD INTERNATIONAL CONFERENCE ON AGRICULTURAL MACHINERY ENGINEERING. V.II
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    • pp.318-324
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    • 2000
  • Ultrasonic and magnetic resonance imaging systems are used to visualize the interior states of biological objects. These nondestructive methods have many advantages but too much expensive. And they do not give exact color information and may miss some details. If it is allowed to destruct some biological objects to get the interior and exterior information, constructing 3D image from the series of the sliced sectional images gives more useful information with relatively low cost. In this paper, PC based automatic 3D model generator was developed. The system was composed of three modules. One is the object handling and image acquisition module, which feeds and slices objects sequentially and maintains the paraffin cool to be in solid state and captures the sectional image consecutively. The second is the system control and interface module, which controls actuators for feeding, slicing, and image capturing. And the last is the image processing and visualization module, which processes a series of acquired sectional images and generates 3D graphic model. The handling module was composed of the gripper, which grasps and feeds the object and the cutting device, which cuts the object by moving cutting edge forward and backward. Sliced sectional images were acquired and saved in the form of bitmap file. The 3D model was generated to obtain the volumetric information using these 2D sectional image files after being segmented from the background paraffin. Once 3-D model was constructed on the computer, user could manipulate it with various transformation methods such as translation, rotation, scaling including arbitrary sectional view.

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