• 제목/요약/키워드: biological data

검색결과 4,501건 처리시간 0.035초

Identification and Phylogenetic Analysis of the Human Endogenous Retrovirus HERV-W LTR Family in Placenta cDNA Library

  • Yi, Joo-Mi;Lee, Ji-Won;Shin, Kyung-Mi;Huh, Jae-Won;Lee, Won-Ho;Jang, Kyung-Lib;Kim, Heui-Soo
    • Animal cells and systems
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    • 제5권3호
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    • pp.243-246
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    • 2001
  • Human endoqenous retroviral long terminal repeats (LTRs) have been found to be coexpressed with sequences of genes closely located nearby. It has been suggested that the LTR elements have contributed to structural changes or genetic variations of human genome connected to various diseases and evolution. Using cDNA library derived from placenta tissue, we performed PCR amplification and identified five new HERV-W LTR elements. Those LTR elements showed a high degree of sequence similarity (98-99%) with HERV-W LTR (AF072500). A phylogenetic tree obtained by the neighbor-joining method revealed that HERV-W LTR elements could be mainly divided into two groups through evolutionary divergence. Five new HERV-W LTR elements (pla-1, 4, 5, 6, 7) belonged to the group I with AX000960, AF072504, and AF072506 from GenBank database. The data suggest that several copy numbers of the HERV-W LTR elements are transcribed in placenta and may contribute to the understanding of biological function such as human placental morphogenesis.

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The Inhibition of Epileptogenesis During Status Epilepticus by Ginsenosides of Korean Red Ginseng and Ginseng Cell Culture (Dan25)

  • N.E., Chepurnova;Park, Jin-Kyu;O.M., Redkozubova;A.A., Pravdukhina;K.R., Abbasova;E.V., Buzinova;A.A., Mirina;D.A., Chepurnova;A.A., Dubina;U.A., Pirogov;M., De Curtis;L., Uva;S.A., Chepurnov
    • Journal of Ginseng Research
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    • 제31권3호
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    • pp.159-174
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    • 2007
  • Pharmacology of Korean Red ginseng gives us unique possibility to develop new class of antiepileptic drugs today and to improve one's biological activity. The chemical structures of ginsenosides (GS) have some principal differences from well-known antiepileptic new generation drugs. The antiepileptic effect of GS was also demonstrated in all models of epilepsy in rats (young and adult), which have studied, in all models of epilepsy including status epilepticus (SE), induced by lithium - pilocarpine. In our experiments in rats new evidences on protective effects were exerted as a result of premedication by GS. Pre-treatment of several GS could induce decrease of the seizures severity and brain structural damage (by MRI), neuronal degeneration in hippocampus. Wave nature of severity of motor seizures during convulsive SE was observed during lithium-pilocarpine model of SE in rats (the first increase of seizures was 30 min after the beginning of SE and the second - 90 min after. The efficacy of treatment on SE by ginsenoside as expected was observed after no less 3 weeks by daily GS i.p. administration. It is blocked SE or significantly decrease the severity of seizures during SE. The implication of presented data is that combination of ginsenosides from Korean Red ginseng and ginseng cell culture Dan25 that could be applied for prevention of epileptical status development. However, a development of optimal ratio of different ginsenosides $(Rb_1$ Rc, Rg, Rf,) should consummate in the new antiepileptic drug development.

ChatGPT의 기초간호학교육 활용 가능성 평가 (Evaluation of the applicability of ChatGPT in biological nursing science education)

  • 김선미;김지훈;최명진;정석희
    • Journal of Korean Biological Nursing Science
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    • 제25권3호
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    • pp.183-204
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    • 2023
  • Purpose: The purpose of this study was to evaluate the applicability of ChatGPT in biological nursing science education. Methods: This study was conducted by entering questions about the field of biological nursing science into ChatGPT versions GPT-3.5 and GPT-4 and evaluating the answers. Three questions each related to microbiology and pharmacology were entered, and the generated content was analyzed to determine its applicability to the field of biological nursing science. The questions were of a level that could be presented to nursing students as written test questions. Results: The answers generated in English had 100.0% accuracy in both GPT-3.5 and GPT-4. For the sentences generated in Korean, the accuracy rate of GPT-3.5 was 62.7%, and that of GPT-4 was 100.0%. The total number of Korean sentences in GPT-3.5 was 51, while the total number of Korean sentences in GPT-4 was 68. Likewise, the total number of English sentences in GPT-3.5 was 70, while the total number of English sentences in GPT-4 was 75. This showed that even for the same Korean or English question, GPT-4 tended to be more detailed than GPT-3.5. Conclusion: This study confirmed the advantages of ChatGPT as a tool to improve understanding of various complex concepts in the field of biological nursing science. However, as the answers were based on data collected up to 2021, a guideline reflecting the most up-to-date information is needed. Further research is needed to develop a reliable and valid scale to evaluate ChatGPT's responses.

소음 감쇠기를 이용한 청각의 뇌기능 자기공명영상 (A Study of the Effect of Acoustic Noise Attenuator on Auditory Functional MRI)

  • 김상환;김인성;이재준;박지애;이영주;여종록;배성진;이상흔;장용민
    • Investigative Magnetic Resonance Imaging
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    • 제9권2호
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    • pp.134-139
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    • 2005
  • 목적 : 청각의 뇌기능 영상 검사 시 소음 감쇠기의 유용성을 알아보고자 하였다. 대상 및 방법 : 소음 감쇠기는 실리콘 이어폰, 귀마개 그리고 마스크로 구성하였다. 마스크와 귀마개는 방음효과가 크다고 알려져 있는 부드러운 재질의 폴리우레탄 시트와 폴리우레탄 폼을 사용하여 제작하였다. 500 Hz의 순음 자극에 대한 청각의 뇌기능 자기공명영상 실험은 4명의 지원자를 대상으로 다음의 세가지 경우로 구별하여 시행하였다: 첫째, 마스크와 귀마개, 이어폰을 모두 착용한 경우, 둘째, 귀마개와 이어폰만을 착용한 경우 그리고 마지막으로 소음 감쇠기를 착용하지 않은 경우 이다. 데이터 획득을 위하여 고성능 경사자계 시스템이 갖추어진 1.5 T 자기공명영상장치에서 BOLD 자기공명 영상기법을 사용하였다. 영상 데이터는 SPM 99 분석프로그램을 이용하여 분석하여 활성화 지도를 획득하였다. 결과 : 소음감쇠기의 모든 구성요소를 사용한 경우 활성화는 주로 일차 청각중추에서만 집중되어 나타나는 결과를 얻었다. 귀마개와 이어폰만을 착용했을 때는 청각의 뇌 활성화 영역이 일차 청각중추와 이차 청각 영역에 분산되어 나타는 결과를 얻었으며 마지막으로 소음감쇠기를 사용하지 않은 경우 청각영역이 오른쪽의 일부만이 활성화 되었다. 결론 : 마스크, 귀마개, 이어폰으로 구성된 소음 감쇠기는 청각의 뇌기능 영상 검사 시 매우 유용할 것으로 기대된다.

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생물학적 데이터 서열들에서 빈번한 최대길이 연속 서열 마이닝 (Mining Maximal Frequent Contiguous Sequences in Biological Data Sequences)

  • 강태호;유재수
    • 정보처리학회논문지D
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    • 제15D권2호
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    • pp.155-162
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    • 2008
  • DNA 염기 서열이나 단백질 아미노산 서열과 같은 생물학적 서열 데이터들은 일반적으로 많은 수의 항목들을 가지고 있다. 생물학적 데이터 서열들에는 보통 빈번하게 발생하는 수 백개의 항목으로 이루어진 연속된 서열들이 존재한다. 이들 서열들에서 빈번하게 발생하는 연속 서열을 검색하는 것은 생물학적 서열 분석에서 중요한 부분을 차지하고 있다. 이전에는 순차 패턴을 효과적으로 발견하고자 하는 많은 연구들이 수행되었으며 대부분의 기존 순차패턴 마이닝 기법들은 Apriori 알고리즘을 기반으로 한다. PrefixSpan 알고리즘은 Apriori 기반의 가장 효율적인 순차패턴 마이닝 기법이다. 하지만 이 알고리즘은 길이-1인 빈발 패턴들로 부터 서열 패턴을 확장해나가는 방식이다. 따라서 길이가 긴 연속 서열을 포함하는 생물학적 데이터서열들에 대한 검색방법으로는 적합하지 않다. 최근에는 기존의 PrefixSpan방식을 이용하면서도 반복적인 처리과정을 줄인 MacosVSpan이 제안되었다. 하지만 이 알고리즘 또한 길이가 긴 생물학적 데이터 서열들로부터 빈번하게 발생하는 연속 서열들을 검색하기에는 효율적이지 않다. 본 논문에서는 많은 양의 생물학적 데이터 서열들로부터 빈번한 연속서열을 고정길이 확장 트리를 이용하여 효과적으로 찾아내는 방법을 제안한다. 그리고 다양한 환경에서 실험을 통해 제안하는 방식이 MacosVSpan알고리즘에 비해 검색성능이 보다 우수함을 보인다.

환자 정보 back-up 시스템에 관한 연구 (A Study on the Patient Data Back-up System)

  • 이윤선;윤형로
    • 대한의용생체공학회:의공학회지
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    • 제5권2호
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    • pp.155-160
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    • 1984
  • In this paper, the patient data back-up system for medical and engineering field was designed. The system consists of 8-bit microprocessor, cassette recorder and data acquisition & control logic. To Inake data reduction, a Marked CORTES Algorythm which can be easily reconstructed was also designed in real time mode. In results, a Marked CORTES Algorythm produced about 35% data reduction rate and reconstructed good original data that are suitable Medician's reading.

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The BIOWAY System: A Data Warehouse for Generalized Representation & Visualization of Bio-Pathways

  • Kim, Min Kyung;Seo, Young Joo;Lee, Sang Ho;Song, Eun Ha;Lee, Ho Il;Ahn, Chang Shin;Choi, Eun Chung;Park, Hyun Seok
    • Genomics & Informatics
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    • 제2권4호
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    • pp.191-194
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    • 2004
  • Exponentially increasing biopathway data in recent years provide us with means to elucidate the large-scale modular organization of the cell. Given the existing information on metabolic and regulatory networks, inferring biopathway information through scientific reasoning or data mining of large scale array data or proteomics data get great attention. Naturally, there is a need for a user-friendly system allowing the user to combine large and diverse pathway data sets from different resources. We built a data warehouse - BIOWAY - for analyzing and visualizing biological pathways, by integrating and customizing resources. We have collected many different types of data in regards to pathway information, including metabolic pathway data from KEGG/LIGAND, signaling pathway data from BIND, and protein information data from SWISS-PROT. In addition to providing general data retrieval mechanism, a successful user interface should provide convenient visualization mechanism since biological pathway data is difficult to conceptualize without graphical representations. Still, the visual interface in the previous systems, at best, uses static images only for the specific categorized pathways. Thus, it is difficult to cope with more complex pathways. In the BIOWAY system, all the pathway data can be displayed in computer generated graphical networks, rather than manually drawn image data. Furthermore, it is designed in such a way that all the pathway maps can be expanded or shrinked, by introducing the concept of super node. A subtle graphic layout algorithm has been applied to best display the pathway data.

재조합 사람 과립구 콜로니 자극인자인 C,J50001의 중합체의 생물학적 활성과 급성독성에 관한 연구 (Biological Activity and Acute Toxicity of the Multimers of CJ500011 Recombinant Human Granulocyte Colony-stimulating Factor (rHuG-CSF), Produced in E. coli)

  • 하석훈;이현수;김기완;정종상;김달현
    • Biomolecules & Therapeutics
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    • 제6권1호
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    • pp.89-94
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    • 1998
  • CJ50001 is a recombinant human granulocyte colony-stimulating facto, (rHuG-CSF) that stimulates the formation of neutrophils from bone marrow stem cells. It was produced in E. colt and purified through refolding and several processes. We produced CS970125(300) using purified C150001 and additives in order to test the stability of CJ50001. When CS970125(300) was stored at 50'S for more than 1 week, high molecular weight proteins were formed and those proteins were detected by non-reducing SDS-PAGE, gel filtration HPLC, and Western blot. Those proteins showed single band at the same position of CJ50001 in reducing SDS-PAGE. These data indicated that those high molecular weight proteins were the multimers of C150001. In biological assays, iu viro and in viro, the multimers did not have biological activity and inhibitory action to that of CJ 50001. The mutimers did not induce toxicity in mice and rats in acute toxicity test. These results suggest that if Cs970125(300) containing CJ50001 is stored at 5$0^{\circ}C$, CJ50001 will be the multimers that do not have biological activity and inhibitory effect to CJ50001 and do not induce acute toxicity.

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