• Title/Summary/Keyword: biological

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Optimization of Cellulase Production in Batch Fermentation by Trichoderma reesei

  • Yu, Xiao-Bin;Nam, Joo-Heon;Yun, Hyun-Shik;Koo, Yoon-Mo
    • Biotechnology and Bioprocess Engineering:BBE
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    • v.3 no.1
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    • pp.44-47
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    • 1998
  • Maximum cellulase production was sought by comparing the activities of the cellulases produced by different Trichoderma reesei strains and Aspergillus niger. Trichoderma reesei Rut-C30 showed higher cellulase activity than other Trichoderma reesei stains and Aspergillus niger that was isolated from soil. By optimizing the cultivation conditions during shake flask culture, higher cellulase production could be achieved. The FP(filter paper) activity of 3.7U/ml and CMCase (Carboxymethylcellulase) activity of 60U/ml were obtained from shake flask culture. When it was grown in 2.5L fermentor, where pH and DO levels are controlled, the enzyme activities were 133.35U/ml (CMCase) and 11.67U/ml(FP), respectively. Ammonium sulfate precipitation method was used to recover enzymes from fermentation broth. The dried cellulase powder showed 3074.9U/g of CMCase activity and 166.7U/g of FP activity with 83.5% CMCase recovery.

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Ten New Recorded Species of Macrofungi on Ulleung Island, Korea

  • Park, Myung Soo;Cho, Hae Jin;Kim, Nam Kyu;Park, Jae Young;Lee, Hyun;Park, Ki Hyeong;Kim, Min-Ji;Kim, Jae-Jin;Kim, Changmu;Lim, Young Woon
    • Mycobiology
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    • v.45 no.4
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    • pp.286-296
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    • 2017
  • Ulleung Island is a biodiversity hotspot in South Korea. During a survey of indigenous fungal species from Ulleung Island conducted from 2015 to 2016, we discovered 10 unrecorded macrofungi in Korea. These macrofungi were identified to the species level using morphological features and phylogenetic analysis based on the internal transcribed spacer region: Deconica phyllogena, Mycena zephirus, Phaeomarasmius proximans, Phlebia radiata, Pluteus semibulbosus, Postia alni, Resinicium pinicola, Scytinostroma portentosum, Tricholomopsis flammula, and Tyromyces kmetii. We also provide detailed morphological descriptions for these 10 species.

Aspergillus caninus (Syn: Phialosimplex caninus): a New Isolate from Field Soils in Korea

  • Adhikari, Mahesh;Gurung, Sun Kumar;Kim, Sang Woo;Lee, Hyun Goo;Ju, Han Jun;Gwon, Byeong Heon;Kosol, San;Bazie, Setu;Lee, Hyang Burm;Lee, Youn Su
    • The Korean Journal of Mycology
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    • v.46 no.4
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    • pp.383-392
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    • 2018
  • During the study of indigenous fungal communities in soil samples collected from various field soils in Sancheong, Gyeongsangnam-do, Korea in 2017, several species of Aspergillus were discovered. Aspergillus caninus (KNU17-7) was isolated, identified, and described based on the results from macro and micro morphological characteristics and molecular characterization. Morphologically, it was identified using five different growth media: potato dextrose agar, oatmeal agar, yeast extract sucrose agar, czapek yeast extract agar, and malt extract agar. For the molecular identification, sequencing of internal transcribed spacer, ${\beta}-tubulin$, and calmodulin genes was performed. Based on this characterization, our study isolate was identified as Aspergillus caninus. This fungal species has not been officially reported in Korea before, and we report here with its morphological and molecular phylogenetic characterization.

A new record of Trichocladium griseum in Korea: morphological and molecular characterization

  • Tagele, Setu Bazie;Nguyen, Thuong T.T.;Kim, Sang Woo;Adhikari, Mahesh;Gurung, Sun Kumar;Lee, Hyun Goo;Gwon, Byeong Heon;Ju, Han Jun;Kosol, San;Lee, Hyang Burm;Lee, Youn Su
    • The Korean Journal of Mycology
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    • v.47 no.2
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    • pp.105-112
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    • 2019
  • A unrecorded species of Trichocladium, Trichocladium griseum, was isolated in 2017 during a survey of fungal diversity in Ulsan province, South Korea. This species was identified based on morphological characteristics and phylogenetic analysis of the internal transcribed spacer (ITS) rDNA and ${\beta}-tubulin$ gene sequences. T. griseum has not yet been reported in South Korea. Thus, we report for the first time a new record of Trichocladium griseum in Korea, and we include the descriptions and morphological illustrations of this fungus.

Characterization of Newly Recorded Talaromyces veerkampii Isolated from Field Soil in Korea based on Morphology and Multigene Sequence Analysis

  • Mahesh Adhikari;Hyun Seung Kim;Hyo Bin Park;Ki Young Kim;In Kyu Lee;Eun Jeong Byeon;Ji Min Woo;Hyang Burm Lee;Youn Su Lee
    • The Korean Journal of Mycology
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    • v.50 no.4
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    • pp.347-355
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    • 2022
  • A fungal isolate belonging to the phylum Ascomycota was isolated and identified as Talaromyces veerkampii in 2017 during a survey of fungal diversity in field soils in Korea. This fungal isolate was identified and described based on macro- and micromorphological and molecular characterization. The identification was also based on partial 18S-ITS1-5.8S-ITS2-28S rDNA and calmodulin (CaM)-encoding gene sequencing data. Talaromyces veerkampii has not been previously reported in Korea. Thus, we report here a newly discovered species from soil in Korea along with its morphological and molecular characteristics.

A report on five unrecorded bacterial species belonging to the phyla Actinomycetota, Bacillota and Pseudomonadota in Korea isolated in 2020

  • Hyosun Lee;So-Yi Chea;Ki-Eun Lee;In-Tae Cha;Dong-Uk Kim
    • Journal of Species Research
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    • v.12 no.spc2
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    • pp.1-6
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    • 2023
  • During an investigation into the indigenous prokaryotic species diversity in Korea, a total of five bacterial strains were isolated from various environments in Korea. The isolated bacterial strains were identified by analyzing their 16S rRNA gene sequences, and those with a minimum of 98.7% sequence similarity with known bacterial species but not reported in Korea were designated as unrecorded species. These isolates were assigned to three phyla, five orders, five families, and five different genera. The isolates were identified as Cumulibacter manganitolerans (99.1%) and Myolicibacterium tusciae (98.7%) of the class Actinomycetes; Bacillus marasmi (99.9%) of the class Bacilli; and Novosphingobium mathurense (100%) and Microvirga ossetica (98.8%) of the class Alphaproteobacteria. Gram reaction, colony and cellular morphology, basic biochemical characteristics, and phylogenetic position of theses isolates are also described.

The Community of Aerial Algae and the Biological Pollution Coverage at 9 Stone Cultural Heritages in Korea (국내 9기 석조문화재의 생물오염피복도 및 기중조류 군집)

  • Kim, Yong-Jin;Kim, Ok-Jin;Lee, Ok-Min
    • Journal of Conservation Science
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    • v.27 no.2
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    • pp.145-154
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    • 2011
  • This research was to examine the biological pollution class by color of the polluted section and calculate the biological pollution coverages of 9 stone heritages in Korea, from June to November 2008. Three storied stone pagoda in Mulgeol-ri, Hongcheon, Three storied stone pagoda in Suta Temple and Stupa to Hongudang in Sutasa Temple showed 90% biological pollution coverage and each stone cultural heritages showed 15~23% range of Bryophyte coverage, proving severe biological pollution. The Four-lion three storied stone pagoda of Gwaeseok-ri, Three storied stone pagoda in Suta Temple and Stupa to Hongudang in Sutasa Temple showed the worst biological pollution class by color of class 5. Three storied stone pagoda in Chang-ri showed satisfactory level of class 2. The result of the correlation analysis between biological pollution class and the biological pollution coverage of lichen showed high correlation coefficient of 0.91, however, the correlation analysis between biological pollution class and bryophyte or aerial algae coverage showed the low correlation coefficient. Eight taxa among all the aerial algae, Cosmarium decedens, Chlorella ellipsoidea, Anabaena fertilissima, Botryococcus braunii, Chroococcus turgidus, Navicula cryptocephala and Xenococcus acervatus showed high correlation coefficient of 0.56~0.85 with biological pollution coverage of bryophyte, in the correlation analysis. The correlation coefficient between biological pollution coverage of lichen, Trebouxia sp. and Chroococcus varius, had a range between 0.43 to 0.50. The correlation coefficient between biological pollution coverage of aerial algae, Achnanthes laterostrata and Ulothrix zonata showed a range of 0.57 to 0.76. Since the aerial algae with high correlation between biological pollution coverage showed clear appearance tendency, they can be used as indicator.

A Study on the Threat of Biological Terrorism in modern society (현대사회의 환경변화에 따른 Bio-Terror의 위협요인 연구)

  • Kang, young-sook;Kim, Tae-hwan
    • Journal of the Society of Disaster Information
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    • v.1 no.1
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    • pp.3-26
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    • 2005
  • In recent years, there is growing concern about the potential use of biological agents in war or acts of terrorism accompanied an increased realization that rapid preparedness and response are needed to prevent or treat the human damage that can be caused by these agents. The threat is indeed serious, and the potential for devastating numbers of casualties is high. The use of agents as weapons, even on a small scale, has the potential for huge social and economic disruption and massive diversion of regional and national resources to combat the threat, to treat primary disease, and to clean up environmental contamination. Biological weapons are one of weapons of mass destruction (or mass casualty weapons, to be precise. since they do not damage non-living entities) that are based on bacteria, viruses, rickettsia, fungi or toxins produced by these organisms. Biological weapons are known to be easy and cheap to produce and can be used to selectively target humans, animals, or plants. Theses agents can cause large numbers of casualties with minimal logistical requirements (in wide area). The spread of disease cannot be controlled until there is awareness of the signs of infection followed by identification of agents; and if the organism is easily spread from person to person, as in the case of smallpox, the number of casualties could run into the tens of thousands. Biological weapons could be used covertly, there can be a lot of different deployment scenarios. A lot of different agents could be used in biological weapons. And, there are a lot of different techniques to manufacture biological weapons. Terrorist acts that make use of Biological Agents differ in a number of ways from those involving chemicals. The distinction between terrorist and military use of Biological Weapon is increasingly problematic. The stealthy qualities of biological weapons further complicate the distinction between terrorism and war. In reality, all biological attacks are likely to require an integrated response involving both military and civilian communities. The basic considerations when public health agencies establish national defence plan against bioterrorism must be 1) arraying various laws and regulations to meet the realistic needs, 2)education for public health personnels and support of concerned academic society, 3)information collection and cooperative project with other countries, 4)Detection and surveillance(Early detection is essential for ensuring a prompt response to biological or chemical attack, including the provision of prophylactic medicines, chemical antidotes, or vaccines) and 5) Response(A comprehensive public health response to a biological or chemical terrorist event involves epidemiologic investigation, medical treatment and prophylaxis for affacted persons, and the initiation of disease prevention or environmental decontamination measures). The purpose of this paper is providing basic material of preparedness and response for biological terrorism in modern society.

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An Analysis on the Researches Using Biological Measurement in Major Korean Nursing Journals (국내 주요 간호학회지에 게재된 생물학적 측정법(Biological measurement)을 이용한 연구에 대한 분석)

  • Kim, Joo-Hyun;Choe, Myoung-Ae;Kim, Yun-Kyung;Kim, Jin-Hak;Kim, Hee-Seung;Park, Mi-Jung;Shin, Gi-Soo;An, Gyeong-Ju;Lee, Yun-Mi;Lee, Kyung-Sook;Jeong, Jae-Sim;Chae, Young-Ran;Hong, Hae-Sook
    • Journal of Korean Biological Nursing Science
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    • v.8 no.2
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    • pp.61-72
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    • 2006
  • Purpose: This study was to examine the frequency, distribution and characteristics of researches using biological measurement published from 2000 to 2004 in 10 major nursing journals in Korea, Design: Literature analysis. Method: Journals including papers using biological measurements, publishing year, research design and outcome variables were analyzed. Results: 1. Researches using biological measurement were 318(13.3%). 2. Researches using biological measurement in the Korean Academy of Nursing were highest(97papers, 17.5%) among the nursing journals. The proportion of papers using biological measurement to total number of papers was the highest in the Journal of Korean Biological Nursing Science as 77.3%(51papers). 3. The 233 papers(73.3%) were experimental researches among 318 papers using biological measurement which showed the highest proportion. 4. Patients were highest subjects of researches using biological measurement(197papers, 61.9%). 5. Blood test was most frequently used as physiological variables from 2001 to 2004. Conclusion: Researches using biological measurement of 10 Korean Nursing Journals in year 2000-year 2004 were very low. We need more researches using biological measurement to provide more objective evidence for nursing practice.

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Biological Control Activity of Two Isolates of Pseudomonas fluorescens against Rice Sheath Blight

  • Choi Gyung-Ja;Kim Jin-Cheol;Park Eun-Jin;Choi Yong-Ho;Jang Kyoung-Soo;Lim He-Kyoung;Cho Kwang-Yun;Lee Seon-Woo
    • The Plant Pathology Journal
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    • v.22 no.3
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    • pp.289-294
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    • 2006
  • Two isolates of mucous bacteria, mc75 and pc78, were isolated from fungal culture plate as culture contaminants with an interesting swarming motility. Both isolates were identified as Pseudomonas fluorescens based on microscopy, biochemical analysis, Biolog test and DNA sequence analysis of the 16S rRNA gene. Both strains have the exactly the same 16S rRNA gene sequences, and yet their biological control activity were not identical each other. In vitro analysis of antagonistic activity of two isolates against several plant pathogenic fungi indicated that both produced diffusible and volatile antifungal compounds of unknown identities. Treatment of the bacterial culture of P. fluorescens pc78 and its culture filtrate exhibited a strong biological control activity against rice sheath blight in vivo among six plant diseases tested. More effective disease control activity was obtained from treatment of bacterial culture than that of culture filtrate. Therefore, in addition to antifungal compound and siderophore production, other traits such as biofilm formation and swarming motility on plant surface may contribute to the biological control activity of P.fluorescens pc78 and mc75.