• 제목/요약/키워드: bio-data processing

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Enhancing the performance of taxi application based on in-memory data grid technology (In-memory data grid 기술을 활용한 택시 애플리케이션 성능 향상 기법 연구)

  • Choi, Chi-Hwan;Kim, Jin-Hyuk;Park, Min-Kyu;Kwon, Kaaen;Jung, Seung-Hyun;Nazareno, Franco;Cho, Wan-Sup
    • Journal of the Korean Data and Information Science Society
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    • v.26 no.5
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    • pp.1035-1045
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    • 2015
  • Recent studies in Big Data Analysis are showing promising results, utilizing the main memory for rapid data processing. In-memory computing technology can be highly advantageous when used with high-performing servers having tens of gigabytes of RAM with multi-core processors. The constraint in network in these infrastructure can be lessen by combining in-memory technology with distributed parallel processing. This paper discusses the research in the aforementioned concept applying to a test taxi hailing application without disregard to its underlying RDBMS structure. The application of IMDG technology in the application's backend API without restructuring the database schema yields 6 to 9 times increase in performance in data processing and throughput. Specifically, the change in throughput is very small even with increase in data load processing.

A bio-text mining system using keywords and patterns in a grid environment

  • Kwon, Hyuk-Ryul;Jung, Tae-Sung;Kim, Kyoung-Ran;Jahng, Hye-Kyoung;Cho, Wan-Sup;Yoo, Jae-Soo
    • Proceedings of the Korea Society for Industrial Systems Conference
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    • 2007.02a
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    • pp.48-52
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    • 2007
  • As huge amount of literature including biological data is being generated after post genome era, it becomes difficult for researcher to find useful knowledge from the biological databases. Bio-text mining and related natural language processing technique are the key issues in the intelligent knowledge retrieval from the biological databases. We propose a bio-text mining technique for the biologists who find Knowledge from the huge literature. At first, web robot is used to extract and transform related literature from remote databases. To improve retrieval speed, we generate an inverted file for keywords in the literature. Then, text mining system is used for extracting given knowledge patterns and keywords. Finally, we construct a grid computing environment to guarantee processing speed in the text mining even for huge literature databases. In the real experiment for 10,000 bio-literatures, the system shows 95% precision and 98% recall.

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Feasibility Study for an Optical Sensing System for Hardy Kiwi (Actinidia arguta) Sugar Content Estimation

  • Lee, Sangyoon;Sarkar, Shagor;Park, Youngki;Yang, Jaekyeong;Kweon, Giyoung
    • Journal of agriculture & life science
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    • v.53 no.3
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    • pp.147-157
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    • 2019
  • In this study, we tried to find out the most appropriate pre-processing method and to verify the feasibility of developing a low-price sensing system for predicting the hardy kiwis sugar content based on VNIRS and subsequent spectral analysis. A total of 495 hardy kiwi samples were collected from three farms in Muju, Jeollabukdo, South Korea. The samples were scanned with a spectrophotometer in the range of 730-2300 nm with 1 nm spectral sampling interval. The measured data were arbitrarily separated into calibration and validation data for sugar content prediction. Partial least squares (PLS) regression was performed using various combinations of pre-processing methods. When the latent variable (LV) was 8 with the pre-processing combination of standard normal variate (SNV) and orthogonal signal correction (OSC), the highest R2 values of calibration and validation were 0.78 and 0.84, respectively. The possibility of predicting the sugar content of hardy kiwi was also examined at spectral sampling intervals of 6 and 10 nm in the narrower spectral range from 730 nm to 1200 nm for a low-price optical sensing system. The prediction performance had promising results with R2 values of 0.84 and 0.80 for 6 and 10 nm, respectively. Future studies will aim to develop a low-price optical sensing system with a combination of optical components such as photodiodes, light-emitting diodes (LEDs) and/or lamps, and to locate a more reliable prediction model by including meteorological data, soil data, and different varieties of hardy kiwi plants.

PSPICE Modeling of Commercial ICs for Switch-Mode Power Supply (SMPS) Design and Simulation

  • Yi, Yun-Jae;Yu, Yun-Seop
    • Journal of information and communication convergence engineering
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    • v.9 no.1
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    • pp.74-77
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    • 2011
  • PSPICE modeling of a commercial LED driver IC (TOP245P) and PC817A optocoupler is proposed for the switch-mode power supply (SMPS) (applicable to LED driver) design and simulation. An analog behavioral model of the TOP245P IC including the shunt regulator, under-voltage(UV) detection, over-voltage(OV) shut-down and SR flip-flop is developed by using PSPICE. The empirical equation of PC817A current transfer ratio (CTR) is fitted from the datasheet of PC817A. Two types of SMPSs are simulated with the averaged-model and switching-model. The simulation results by the proposed PSPICE models are in good agreement with those in the data sheet and an experimental data.

Construction of Korean symptom articulation data using rule-based data augmentation technique (규칙기반 데이터 증강기법을 활용한 한국어 증상발화 데이터 구축)

  • Seong-Won Jeon;Dong-Jun Lee;Dong-Ho Lee
    • Proceedings of the Korea Information Processing Society Conference
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    • 2023.05a
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    • pp.360-362
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    • 2023
  • 건강정보 검색 요구가 증가하면서 다양한 건강정보 검색 서비스가 제공되고 있다. 하지만 최근의 건강정보 검색 서비스는 정형화 된 전문적인 의료정보와 그 해석을 제공하기 때문에 사용자는 이러한 정보를 스스로 이해하여 원하는 건강정보를 검색해야 한다. 사용자의 검색 피로를 줄이고 원하는 정보를 정확하게 얻을 수 있는 건강정보 검색 시스템 개발을 위하여 사용자의 비의료적 표현인 한국어 증상발화 데이터 구축이 선행되어야 한다. 이러한 데이터 구축은 많은 시간과 비용이 필요하기 때문에 이를 줄이기 위한 규칙기반 데이터 증강기법을 제시하고, 이를 활용하여 한국어 증상발화 데이터를 증강하였다. 증강된 데이터의 유효성을 보이기 위하여 KoBERT 기반의 증상분류 실험을 진행하였으며, 증강된 데이터가 그 전의 데이터보다 F1 스코어가 더 높음을 확인할 수 있었다.

Signl processing method and diagnostic algorithm for arterial oxygen-saturation measument (산소포화도 측정을 위한 신호처리방법 및 계산 알고리즘)

  • 김수진;황돈연;전계진;이종연;정성규;윤길원
    • Korean Journal of Optics and Photonics
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    • v.11 no.6
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    • pp.452-456
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    • 2000
  • A measurement unit and signal processing algorithm have been developed for predicting arterial oxygen saturation noninvasively. The measurement set-up was composed of a probe including light source and photodetector, optical signal processing section, LED driving circuit, PC interface software for data acquisition and data processing software. Light from the LED's was irradiated onto the finger nail bed and transmitted light was measured at different wavelengths. An effective baseline correction method was developed and measured data were analyzed by using various data processing methods and prediction algOlithms. For performance evaluation, a pulse oximeter simulator (Bio- Tek Instrument Inc.) was used as reference. The best performance in terms of the correlation coefficient and the standard deviation was obtained under the following conditions; when the arterial signals were computed in terms of area rather than peak-valley difference, and when the algorithm calculating by $In(I_p/I_v)/I_{avr}$ value for pulsation waveform was used. In in vivo test, prediction was improved when the developed baseline correction method was used. In addition, wavelengths of 660 nm and 940 nm provided better linearity and precision than wavelengths of 660 nm and 805 nm. 05 nm.

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Bio-Data Classification Using Tensor-based Data Generation Model (텐서 기반 데이터 생성 모델을 이용한 생체데이터 분류)

  • Yoon, Dongwoo;Park, Hyeyoung
    • Proceedings of the Korea Information Processing Society Conference
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    • 2007.11a
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    • pp.7-8
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    • 2007
  • 생체데이터란 인간개체로부터 얻을 수 있는 고유의 생체신호를 통틀어 일컫는 것이다. 본 연구에서는 생체데이터를 위한 팩터 분석 모델에 텐서 개념을 적용하여, 2차 텐서로 표현된 데이터를 위한 생성모델을 제안한다. 이 모델을 바탕으로 데이터로부터 분류에 핵심이 되는 정보를 안정적으로 추출하여 유사도 함수를 만들고 분류를 수행하는 방법을 제안한다. 실험을 통해 제안하는 방법이 기존의 벡터형태의 데이터에 대한 생성 모델을 사용한 경우보다 우수한 성능을 가짐을 확인할 수 있었다.

m-Health System for Processing of Clinical Biosignals based Android Platform (안드로이드 플랫폼 기반의 임상 바이오신호 처리를 위한 모바일 헬스 시스템)

  • Seo, Jung-Hee;Park, Hung-Bog
    • Journal of the Korea Society of Computer and Information
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    • v.17 no.7
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    • pp.97-106
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    • 2012
  • Management of biosignal data in mobile devices causes many problems in real-time transmission of large volume of multimedia data or storage devices. Therefore, this research paper intends to suggest an m-Health system, a clinical data processing system using mobile in order to provide quick medical service. This system deployed health system on IP network, compounded outputs from many bio sensing in remote sites and performed integrated data processing electronically on various bio sensors. The m-health system measures and monitors various biosignals and sends them to data servers of remote hospitals. It is an Android-based mobile application which patients and their family and medical staff can use anywhere anytime. Medical staff access patient data from hospital data servers and provide feedback on medical diagnosis and prescription to patients or users. Video stream for patient monitoring uses a scalable transcoding technique to decides data size appropriate for network traffic and sends video stream, remarkably reducing loads of mobile systems and networks.

MAHA-FS : A Distributed File System for High Performance Metadata Processing and Random IO (MAHA-FS : 고성능 메타데이터 처리 및 랜덤 입출력을 위한 분산 파일 시스템)

  • Kim, Young Chang;Kim, Dong Oh;Kim, Hong Yeon;Kim, Young Kyun;Choi, Wan
    • KIPS Transactions on Software and Data Engineering
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    • v.2 no.2
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    • pp.91-96
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    • 2013
  • The application field of supercomputing systems are changing to support into the field for both a large-volume data processing and high-performance computing at the same time such as bio-applications. These applications require high-performance distributed file system for storage management and efficient high-speed processing of large amounts of data that occurs. In this paper, we introduce MAHA-FS for supercomputing systems for processing large amounts of data and high-performance computing, providing excellent metadata operation performance and IO performance. It is shown through performance analysis that MAHA-FS provides excellent performance in terms of the metadata processing and random IO processing.

- A Study on the Bio-Industry Development Plan and Selecting Location in the Northern Kyonggi Province of SWOT Analysis - (SWOT분석을 통한 경기 북부 바이오 산업 육성방안 및 입지선정에 관한 연구)

  • 임총규;박주식;강경식
    • Journal of the Korea Safety Management & Science
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    • v.5 no.2
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    • pp.225-238
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    • 2003
  • This study shows that the SWOT is efficient to select a factor which is valuable as worth consideration when a decision making is necessary. Such processing of information is able to present the policy for the development of bio-industry in northern area of Kyonggi province, and create the pragmatic value and effect in carrying out the policy. The object of this study is to survey present conditions, to analyze the development of bio-industry in northern area of Kyonggi province by the decision making method of the SWOT model, to suggest a plan for the prospect of continued development field and the location of industry, and to extract fundamental data for establishment of annual action and investment plan which can develop bio-industry.