• Title/Summary/Keyword: X-ray crystallography

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Synthesis and Crystal Structure of $Me_2Pt(PPh_2CH_2C(t-Bu)=N-N=CMe(2-py)-\kappa^2N,P)$ ($Me_2Pt(PPh_2CH_2C(t-Bu)=N-N=CMe(2-py)-\kappa^2N,P)$의 합성 및 결정 구조)

  • Cho Sung Il;Kang Sang Ook;Chang K.
    • Korean Journal of Crystallography
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    • v.15 no.2
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    • pp.83-87
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    • 2004
  • An organometallic complex. $Me_2Pt(PPh_2CH_2C(t-Bu)=N-N=CMe(2-py)-\kappa^2N,P)$ was synthesized from phosphinohydrazone $Ph_2PCH_2C(t-Bu)=NNH_2$, 2-acetylpyridine, and $[PtMe2({\mu}-SMe_2)]_2$. The molecular structure of this complex has been determined by X-ray diffraction. Crystallographic data: monoclinic, space group $P2_1/n,\;a=11.6926(7)\;{\AA},\;b=15.6607(19)\;{\AA},\; c=14.6125(6)\;{\AA},\;\beta=93.018(4)^{\circ},\;Z=4,\;V=2672.0(4)\;{\AA}^3$. The structure was solved by direct methods and refined by full-matrix least-squares methods to give a model with a reliability factor R = 0.0363 for 5238 reflections.

Synthesis and Crystal Structure of 1-(dimethylbromotin)-2-[(methoxyl)methly]-o-carborane $(C_{16}H_{21}B_{10}BrOSn)$ (1-(Dimethylbromotin)-2-[(methoxyl) methly]-o-carborane $(C_{16}H_{21}B_{10}BrOSn)$의 합성 및 결정 구조)

  • Cho Sung Il;Kang Sang Ook;Chang K.
    • Korean Journal of Crystallography
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    • v.15 no.2
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    • pp.88-92
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    • 2004
  • An organometallic compound, $(C_{16}H_{21}B_{10}BrOSn)$, was synthesized from o-carborane, closo-1-[(methoxyl)methyl]-o-carborane $(HCab^o)$, and $SnMe_2Br_2$. The molecular structure of this complex has been determined by X-ray diffraction. Crystallographic data: orthorhombic, space group Pna2, a = 17.9292(15)$\AA$, b= 7.2066(4)$\AA$, c=13.0582(10)$\AA$, Z=4, V=1687.2(2) $\AA^3$. The structure was solved by direct methods and refined by full-matrix least-squares methods to give a model with a reliability factor R=0.0574 for 1724 reflections.

[ $C_{16}H_{19}O_2N_3CuCl_2\;{\cdot}\;H_2O$ ] ($C_{16}H_{19}O_2N_3CuCl_2\;{\cdot}\;H_2O$의 결정 구조)

  • Kim Moon-Jib;Kim Young-Soo;Choi Ki-Young
    • Korean Journal of Crystallography
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    • v.15 no.2
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    • pp.99-103
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    • 2004
  • The structure of $C_{16}H_{19}O_2N_3CuCl_2\;{\cdot}\;H_2O$ has been determined by X-ray diffraction methods. The crystal system is triclinic, space group Pl, unit cell constants. $a=7.6202(9)\; \AA,\; b=8.5943(7) \AA,\; c= 8.6272(6) \AA,\; \alpha= 67.518(6)^{\circ}.\; \beta= 68.043(8)^{\circ},\; \gamma=74.370(8)^{\circ},\; V=478.89(8)\; \AA^3,\; T=295K,\; Z=1,\; D_c=1.504Mgm^{-3}$The intensity data were collected on an Enraf-Nonius CAD-4 Diffractometer with graphite monochromated $MoK\alpha$ radiation $(\alpha=0.7107\;\AA)$. The molecular structure was solved by direct method.』 and refined by full-matrix least squares to a final $R=2.47\%$ for 1659 unique observed $F_0>4\sigma(F_0)$ reflections and 234 parameters.

Synthesis and Structure of Tetrahomodioxa p-phenylcalix(4)arene dihexylether (Tetrahomodioxa p-phenylcalix(4) arene dihexylether의 합성 및 구조에 관한 연구)

  • 노광현;박영자
    • Korean Journal of Crystallography
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    • v.13 no.3_4
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    • pp.158-164
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    • 2002
  • Tetrahomodioxa p-phenylcalix(4)arene dihexylether(C/sub66/H/sub68/O/sub6/) has been synthesized and structurally characterized by X-ray diffraction. Reaction of tetrahomodioxa p-phenylcalix(4)arene with hexyl halide and NaH in DMF leads to the dihexyl derivatives, 7,13,21,27-tetraphenyl-29,31-dihexyloxy- 2,3,16,17-tetrahomo-3,17-dioxacalit(4)arenes. The crystal is orthorhombic, P2₁2₁2₁, a= 9.764(2), b=16.167(2), c=32.994(3) Å, V=5208(1) Å, Z= 4, Dc = 1.221 gcm/sup -3/. The structure was solved by direct methods and refined by full-matrix least squares. Refinement converged at R = 0.070 for 2009 observed reflections. This molecule has a C-1,2-alternate conformation with pseudo-centrosymmetry and has two pairs of opposite phenyl rings, which are approximately parallel to each other. The benzene rings A and B are up, and the rings C and D rings are down with respect to the plane of the macrocyclic ring.

Crystal Structures of the Two Isomorphous A-DNA Decamers d(GTACGCGTAC) and d(GGCCGCGGCC)

  • Kim, Tae-gyun;Kwon, Taek-Hun;Jung, Hye-sun;Ku, Ja-Kang;Sundaralingam, Muttaiya;Ban, Chang-ill
    • Bulletin of the Korean Chemical Society
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    • v.27 no.4
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    • pp.568-572
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    • 2006
  • To study the effect of sequence on DNA structure, the two decamer crystal structures one alternating,d(GTACGCGTAC), and the other non-alternating, d(GGCCGCGGCC), were solved. Crystals of both decamers belong to the hexagonal space group $P6_122$, with one strand in the asymmetric unit. The unit cell constants of the alternating decamer are a = b = 39.26 $\AA$, c = 77.70 $\AA$. The structure was refined with 1,828 reflections from 8.0 to 2.0 Aresolution to an R value of 21.3% with all DNA atoms and 63 water molecules. The isomorphous non-alternating decamer had unit cell dimensions of a = b = 39.05 $\AA$, c = 82.15 $\AA$. The structure was refined with 2,423 reflections from 8.0 to 2.0 $\AA$ resolution to a final R value of 22.2% for all DNA atoms and 65 water molecules. Although the average helical parameters of the decamers are typical of A-DNAs, there are some minor differences between them. The helical twist, rise, x-displacement, inclination and roll alternate in the alternating decamer, but do not in the non-alternating decamer. The backbone conformations in both structures show some differences; the residue G(7) of the alternating decamer is trans for $\alpha$ and $\gamma$ while the trans conformations are observed at the residue G(8) of the non-alternating decamer.

The Crystal Structure of Cantharidin $(C_{10}H_{12}O_{4})$ (Cantharidin$(C_{10}H_{12}O_{4})$의 결정 구조)

  • 김문집;박호종;김대영;이종수
    • Korean Journal of Crystallography
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    • v.13 no.2
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    • pp.91-95
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    • 2002
  • The structure of Cantharidin (Hexahydro-3a,7a-dimethy1-4,7-epoxyisobenzofuran-1,3-dione, C/sub 10/H/sub 12/O/sub 4/)has been determined by X-ray diffraction methods. The crystal system is orthorhombic, space group Pna2/sub 1/, unit cell constants, a=11.0731(9) (equation omitted), b=6.7344(4) (equation omitted), c=12.5000(9) (equation omitted), α=β=γ=90°, V=932.13(12) (equation omitted), T=296K, Z=4, D/sub c/=1.398Mgm/sup -3/. The intensity data were collected on an Enraf-Nonius CAD-4 Diffractometer with graphite monochromated MoKα radiation(λ=0.71073(equation omitted)). The molecular structure was solved by direct methods and refined by full-matrix least squares to a final R=4.42% for 759 unique observed F/sub o/>4σ(F/sub o/) reflections and 140 parameters.

Structure Refinement of $Nd_3Ba_5Co_4O_{15}$ Phase by Rietveld Method (Rietveld법에 의한 $Nd_3Ba_5Co_4O_{15}$상의 정밀화)

  • 이재열;송수호
    • Korean Journal of Crystallography
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    • v.9 no.1
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    • pp.48-52
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    • 1998
  • The new Nd3Ba5Co4O15 phase was synthesized with Nd2O3, BaCO3, and Co3O4 by solid state reaction at 1200℃ with intermittent grinding. The crystal structure of Nd3Ba5Co4O15 has been refined on X-ray diffraction powder data by means of Rietveld method. The starting model was based on the Nd3.43Ba4.42Co2.23Al1.77O15 structure. The crystal system was hexagonal, space group P63mc(186), a=11.629(3) Å, c=6.842(2) Å. Final R values were Rwp=0.097 and Rp=0.068. The structure consists of clusters of CoVICoIV3O15 in which a CoVI octahedron shares corners with 3CoIV tetrahedra.

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The Structures of Dehydrated Fully $Ca^{2+}$-Exchanged Zeolite A and of Its iodine Sorption Complex (칼슘 이온으로 완전히 치환된 제올라이트 A의 탈수 구조와 칼슘 치환 제올라이트 A에 요오드가 흡착된 착물 구조)

  • Jang, Se-Bok;Han, Yong-Wook;Kim, Duk-Soo;Kim, Yang
    • Korean Journal of Crystallography
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    • v.1 no.2
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    • pp.76-83
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    • 1990
  • The structures of dehydrated fully Ca2+ _exchanged zeolite A (a: 12.2a3(2) A and of its iodine sorption complex (a=12.258(2) A) have been determined by single-crystal X-ray diffraction methods in the cubic space group. Pm3m at 21(1)℃.the structures were refined to final R(weighted) indices of 0.081 with 206 reflections and 0.084 with 173 reflections, respectively for which I>3 w (I). In each structure. six divalent cations are located on three different theefold axes associated with 6-ring oxygens. Dehydrated Ca2+_A sorbs ca. 6.0 diiodine molecules per unit cell at 80℃(vapor pressure of I: is ca. 14.3 Torr). Each iodine molecule makes a close approach. along its ahs to framework oxygen atom with I-I distance of 2.71(2) A, I-O distance of 3.32(3) k. and I-I-0=180℃. The result indicates that diiodine molecule forms charge transfer complex with framework oxygen.

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Structure of Cholesteryl Crotonate (Cholesteryl crotonate의 구조)

  • 박영자;신정미
    • Korean Journal of Crystallography
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    • v.13 no.1
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    • pp.21-24
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    • 2002
  • The crystal structure of cholesteryl crotonate was investigated by X-ray diffraction. Crystallo-graphic data for the title compound: P2₁, a = 13.446(4) , b = 11.802(3) , c = 18.782(5) , β = 103.99(2)°, Z = 4. Reflections were collected with an Enraf-Nonius CAD-4 diffractometer equipped with a graphite monochromator. The structure was solved by direct methods and refined by least-squares analyses. The final R value was 0.092 for 1604 reflections. The cholesterol fragment of the title compound were in good agreement with those for related cholesterol derivatives. The molecules were stacked in clearly separated layers. At the center of the layers, there were cholesterol-cholesteryl interactions between the symmetry-related A molecules and the cholesteryl-C(17) side chain of B molecules. There were also interactions between the C(17) side chain of A molecules and the crotonate chains off and B molecules in the interface region between layers. The crystal structure of the title compound turned out to be isostructural with those of cholesteryl ethylcarbonate, cholesteryl propylcarbonate, and cholesterol crotylcarbonate. The crystals show the liquid crystalline state having the cholesteric phase.

Crystal Structure of $KTiP_2O_7$ (의 결정구조)

  • 이건수;윤호섭
    • Korean Journal of Crystallography
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    • v.7 no.1
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    • pp.57-63
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    • 1996
  • The compound titanium (III) pyrophosphate, KTiP2O7 has been prepared and the crystal structure of the compound has been determined by the X-ray diffraction techniques. It crytallizes in the space group P21/a of the monoclinic system with four formula units in a cell of dimensions a=8.210(3), b=10.292(2), c=7.434(1)Å and β=106.71(2)°. The structure consists of the framework possessing corner-sharing octahedral TiO6 and pyrophosphate groups. As a result, a tunnel structure has been constructed and the K+ cations reside inside the tunnel. KTiP2O7 is isostructural with other trivalent metal pyrophosphates such as KAlP2O7 and RbTiP2O7 but the size difference of the alkali metals causes the variation in the structure. The classical charge balance of the compound can be described as [K+][Ti3+][P24O74-].

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