• 제목/요약/키워드: Wild strain

검색결과 608건 처리시간 0.023초

Expression of the crylAcl Gene Under the Control of the Native or the $\alpha$-Amylase Promoters in an Acrystalliferous Bacillus thuringiensis Strain

  • Roh, Jong-Yul;Lee, In-Hee;Li, Jian-Hong;Li, Ming-Shun;Kim, Ho-San;Je, Yeon-Ho;Boo, Kyung-Saeng
    • International Journal of Industrial Entomology and Biomaterials
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    • 제1권2호
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    • pp.123-129
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    • 2000
  • Expression of the crylAcl gene of an acrystalliferous Bacillus thuringiensis strain under the control of the native or $\alpha$-amylase gene promoter was investigated. The crylAcl gene was cloned in a B. thuringiensis - E. coli shutle vector, pHT3101, undder the control of either the native promoter (pProAc) or the $\alpha$-amylase promoter from Bacillus subtilis (pAmyAc). These two recombinant plasmids were successfully expressed in B. thuringiensis subsp. kurstaki Cry B. The first transformant (ProAc/CB), harboring pProAc, expressed an about 130 kDa protein begining 24 hr after inoculations just as in the case of the wild type of B. thuringiensis subsp. kurstaki HD-73. The second pAmyAc-transformant (AmyAc/CB) began to express the gene just 6 hr after inoculation, but Western analysis showed that the activity of the $\alpha$-amylase promoter was relatively weaker than that of the native promoter. As expected, their toxicity against Plutella xylostella larvae was dependent on the amount of Cry1Acl protein expressed.

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후면 덧쌓기에 따른 농업용 저수지 제체의 안정성 평가 (Safety evaluation of agricultural reservoir embankment according to backside extension)

  • 이달원;노재진
    • 농업과학연구
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    • 제39권1호
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    • pp.97-110
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    • 2012
  • This study was carried out for safety evaluation, the practical application and improvement of design method of the agricultural reservoir embankment according to backside extension. Seepage analysis, slope stability analysis and finite element analysis were performed for steady state and transient conditions. Also, the pore water pressure, seepage quantity, safety factor and stress-strain behavior according to high water level and rapid drawdown were compared and analyzed. The pore water pressure at contact region between backside extension and old embankment was kept high after rapid drawdown. Therefore, backside extension is recommended that design method is required to be improved and reinforced more than the others raising embankment. The hydraulic gradients before and after backside extension showed high value at the base of the core, but they showed stable state at the upstream slope and downstream slope. The seepage quantity per 1 day and the leakage per 100 m for the steady state and transient conditions appeared to be safe against the piping. The safety factor of slope stability showed high at the steady state, and transient conditions did not show differences depending on the rapid drawdown. The safety factor was appeared high at the upstream slope before backside extension and downstream slope after extension. The excess pore water pressure for steady state and transient conditions showed negative(-) at the upstream slope, it was small at the downstream slope. The mean effective stress (p') showed high at the base of the core and to be wild distribution after the extension. The displacement after extension showed 0.02-0.06 m in the upstream slope, the maximum shear strain after extension was smaller than that before extension.

핵전이에 의한 Aspergillus oryzae var. oryzae와 Penicillium chrysogenum의 잡종형성 및 Alkaline Protease생성 (The Hybrid Formation between Aspergillus oryzae var. oryzae and Penicillium chrysogenum by Nuclear Transfer and the Production of Alkaline Protease.)

  • 양영기;강희경;임채영;문명님
    • 한국미생물·생명공학회지
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    • 제26권4호
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    • pp.290-296
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    • 1998
  • Alkaline protease 생산력이 우수한 야생형인 A. oryzae val. oryzae의 핵을 순수 분리하여 영양요구성 변이주인 P. chrysogenum(T$yr^{-}$)의 원형질체에 전달하는 핵전이를 이용하여 종간잡종을 형성시킨 후 이들 형질전환체으로 부터 alkaline protease 고생산 균주를 획득하였다. 핵전이를 위한 원형질체 형성 및 재생 조건에서는 Novozym 234의 농도 1%, 삼투안정제는 0.6 M KCl, 효 소의 처리 시간은 180분 그리고 최적 pH는 5.8로 나타났다. 핵전이에 의한 형질전환의 빈도는 1.3~3.8$\times$$10^{-4}$으로 비교적 낮은 편이었으며, 유전적 안정성, conidia의 크기, DNA함량의 측정 그리고 핵염색의 결과 형질전환체의 핵형은 aneuploid로 추정되었다. 형질전환체의 alkaline protease 활성은 모균주와 비교하여 1.1~2.2배 증가하였다.다.

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A Gene Encoding Phosphatidyl Inositol-specific Phospholipase C form Cryphonectria parasitica Modulates the Hypoviral-modulated Laccase1 Expression

  • Kim, Dae-Hyuk
    • 한국미생물학회:학술대회논문집
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    • 한국미생물학회 2005년도 International Meeting of the Microbiological Society of Korea
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    • pp.159-161
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    • 2005
  • Hypovirus infection of the chestnut blight fungus Cryphonectria parasitica is a useful model system to study the hypoviral regulation of fungal gene expression. The hypovirus is known to downregulate the fungal laccase1 (lac 1), the modulation of which is tightly governed by the inositol triphosphate ($IP_3$) and calcium second messenger system in a virus-free strain. We cloned the gene cplc1 encoding a phosphatidyl inositol-specific phospholipase C (PLC), in order to better characterize the fungal gene regulation by hypovirus. Sequence analysis of the cplc1 gene indicated that the protein product contained both the X and Y domains, which are the two conserved regions found in all known PLCs, with a 133 amino acid extension between the 2nd ${\beta}$-strand and the ${\alpha}$-helix in the X domain. In addition, the gene organization appeared to be highly similar to that of a ${\delta}$ type PLC. Disruption of the cplc1 gene resulted in slow growth and produced colonies characterized by little aerial mycelia and deep orange in color. In addition, down regulation of lac1 expression was observed. However, temperature sensitivity, osmosensitivity, virulence, and other hypovirulence-associated characteristics did not differ from the wild-type strain. Functional complementation of the cplc1-null mutant with the PLC1 gene from Saccharomyces cerevisiae restored lac1 expression, which suggests that the cloned gene encodes PLC activity. The present study indicates that the cplc1 gene is required for appropriate mycelial growth, and that it regulates the lac1 expression, which is also modulated by the hypovirus. Although several PLC genes have been identified in various simple eukaryotic organisms, the deletion analysis of the cplc1 gene in this study appears to be the first report on the functional analysis of PLC in filamentous fungi.

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Expression and Morphology of Crystal Proteins in Bacillus thuringiensis subsp. kurstaki Cry-B

  • Park, Hyeon-U;Kim, Ho-San;Kim, Yeong-Hun;Jin, Byeong-Rae;Gang, Seok-Gwon
    • 한국잠사곤충학회지
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    • 제36권2호
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    • pp.157-161
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    • 1994
  • B. thuringiensis subsp. kurstaki Cry-B에서 cryIA(b) 유전자 promoter 조적을 받는 cryIA(c) 유전자와 그 자신의 promoter 조절을 받는 cryIIA 유전자의 발현 여부와 내독소 단백질의 형태를 관찰하기 위하여, 이들 두 내독소 단백질 유전자를 B.thuringiensis - E. coli shuttle vector를 이용하여 발현벡터 pKC1A와 pKC2A를 각각 제작하였다. 발현벡터 pKC1A와 pKC2A를 B. thuringiensis subsp. kurstaki Cry-B 균주에 형질전환시키고, 이들 형질전환체로부터 각각 bipyramid형과 cuboid형의 정상적인 내독소 단백질이 발현되었음을 확인하였다.

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Overexpression of sprA and sprB Genes is Tightly Regulated in Streptomyces griseus

  • KIM , YOON-HEE;CHOI, SI-SUN;KANG, DAE-KYUNG;KANG, SANG-SOON;JEONG, BYEONG-CHUL;HONG, SOON-KWANG
    • Journal of Microbiology and Biotechnology
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    • 제14권6호
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    • pp.1350-1355
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    • 2004
  • The sprA and sprB genes, encoding the chymotrypsin-like proteases Streptomyces griseus protease A (SGPA) and Streptomyces griseus protease B (SGPB), and the sprT gene that encodes Streptomyces griseus trypsin (SGT) were cloned from S. griseus and were overexpressed in various strains of S. griseus. When the sprT gene was introduced into S. griseus, trypsin activity increased 2-fold in the A-factor deficient mutant strain, S. griseus HH1, and increased 4-fold in the wild strain, S. grise us IFO 13350. However, there was no detectable increase of chymotrypsin activity in the transformants of S. griseus with either sprA or sprB, in contrast to the results obtained from S. lividans as a heterologous host. To solve the negative gene dosage effects in S. griseus, either the sprA or the sprB genes with their own ribosome binding sites were linked to the downstream of the entire sprT gene, and the coexpression efficiency was examined in S. lividans and S. griseus. The transformants of S. lividans with either pWHM3-TA (sprT+sprA) or pWHM3­TB (sprT+sprB) showed 3-fold increase of trypsin activity over that of the control, however, only the transformant of pWHM3-TB demonstrated 7-fold increase in chymotrypsin activity, indicating that the pWHM3-TB has a successful construction for the overexpression of chymotrypsin in Streptomyces. When the coexpression vectors were introduced into S. griseus IFO 13350, the trypsin level sharply increased by more than 4-fold, however, the chymotrypsin level did not increase. These results strongly suggest that the overexpression of the sprA and sprB genes is tightly regulated in S. griseus.

Molecular Characterization of Biosynthetic Genes of an Antifungal Compound Produced by Pseudomonas fluorescens MC07

  • Kim Jin-Woo;Kim Eun-Ha;Kang Yong-Sung;Choi Ok-Hee;Park Chang-Seuk;Hwang In-Gyu
    • Journal of Microbiology and Biotechnology
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    • 제16권3호
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    • pp.450-456
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    • 2006
  • Pseudomonas fluorescens MC07 is a growth-promoting rhizobacterium that suppresses mycelial growth in fungi such as Rhizoctonia solani, Pythium ultimum, Fusarium oxysporum, and Phytophthora capsici. To determine the role of the bacterium's antifungal activity in disease suppression, we screened 2,500 colonies generated by Tn5lacZ insertions, and isolated a mutant 157 that had lost antifungal activity. The EcoRI fragment carrying Tn5lacZ was cloned into pBluescript II SK(+) and used as a probe to isolate wild-type clones from a genomic library of the parent strain, MC07. Two overlapping cosmid clones, pEH4 and pEH5, that had hybridized with the mutant clone were isolated. pEH4 conferred antifungal activity to the heterologous host P.fluorescens strain 1855.344, whereas pEH5 did not. Through transposon mutagenesis of pEH4 and complementation analyses, we delineated the 14.7-kb DNA region that is responsible for the biosynthesis of an antifungal compound. DNA sequence analysis of the region identified 11 possible open reading frames (ORF), ORF1 through ORF11. A BLAST search of each putative protein implied that the proteins may be involved in an antifungal activity similar to polyketides.

Role of Alkaline Serine Protease, Asp, in Vibrio alginolyticus Virulence and Regulation of Its Expression by LuxO-LuxR Regulatory System

  • Rui, Haopeng;Liu, Qin;Wang, Qiyao;Ma, Yue;Liu, Huan;Shi, Cunbin;Zhang, Yuanxing
    • Journal of Microbiology and Biotechnology
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    • 제19권5호
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    • pp.431-438
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    • 2009
  • The alkaline serine protease asp, which was shown to be a virulence factor of Vibrio alginolyticus as a purified protein, was cloned from V. alginolyticus EPGS, a strain recently isolated from moribund Epinephelus coioides in an outbreak of vibriosis in a mariculture farm of Shenzhen. The asp null mutant was constructed by homologous recombination with suicide plasmid pNQ705-1. Compared with the wild-type strain, the asp null mutant exhibited a significant decrease of total extracellular protease activity, and caused a IS-fold decrease in virulence of V. alginolyticus. In our previous study, the luxO and $luxR_{val}$ genes from V. alginolyticus MVP01 were cloned and identified, and the luxO-$luxR_{val}$ regulatory couple was shown to regulate various genes expression, suggesting that it played a central role in the quorum sensing system of V. alginolyticus. In this study, the regulation of the asp gene was analyzed by using RT-PCR and quantitative real-time PCR methods; we proved that its transcription was greatly induced at the late stage of growth and was regulated by a luxO-$luxR_{val}$ regulatory system.

Phylogenetics, Safety and In Vitro Functional Properties of Bacillus Species Isolated from Iru, a Nigerian Fermented Condiment

  • Adewumi, Gbenga Adedeji;Grover, Sunita;Isanbor, Chukwuemeka;Oguntoyinbo, Folarin Anthony
    • 한국미생물·생명공학회지
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    • 제47권4호
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    • pp.498-508
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    • 2019
  • Bacillus species were isolated from iru, a traditional fermented condiment in Nigeria. Polyphasic approach was used to evaluate the phylogenetic relationship and strain sub-type of the isolated species. Additionally, the phylogenetic profiles of the species isolated from iru were compared with those of bacilli isolated from different continents. The phylogenetic diversity analysis was performed using the combination of 16S rRNA gene sequencing, ITS-PCR, ITS-PCR-RFLP, and M13 RAPD-PCR. The analysis revealed that Bacillus subtilis U170B and B. subtilis U146A isolated from iru were the closest relatives of strains belonging to the phylogeny of B. subtilis sensu stricto and were related to other bacilli isolated from different continents that had functional benefits. The two isolated species exhibited resistance to acidic pH (pH 2.0). The survival rates of B. subtilis U170B, B. subtilis U146A, and B. clausii UBBC-07 (commercial probiotic strain) cultured at pH 2.0 for 3 h were 33.45, 12.44, and 9.53%, respectively. The strains were highly tolerant to bile salts [0.3% (w/v)]. B. subtilis U170B exhibited the highest cell viability (43.45%) when cultured for 3 h in the presence of bile salts, followed by B. subtilis U146A (25%) and B. clausii UBBC-07 (18.94%). B. subtilis U170B and B. subtilis U146A did not exhibit haemolytic activity and were susceptible to different antibiotics. Additionally, these two strains exhibited weak antagonistic activity against B. cereus. The diverse wild strains of B. subtilis can be used as a safe multifunctional starter culture for the industrial production of condiments with health benefits.

Identification of a Gene for Aerobic Growth with a SoxS Binding Sequence in Escherichia coli by Operon Fusion Techniques

  • Lee, Yong-Chan;Kwon, Hyung-Bae;Lee, Sang-Ho;Kwon, Hye-Won;Sung, Ha-Chin;Kim, Joon;Choe, Mu-Hyeon
    • Journal of Microbiology and Biotechnology
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    • 제11권6호
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    • pp.1115-1119
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    • 2001
  • Eight Escherichia coli cells with aerobic growth deflects were isolated by the insertion of ${\lambda}placMu53$, a hybrid bacteriophage of ${\lambda}$ and Mu, which created transcriptional fusion to lacZY. Two of these mutants, CLIO and CLl2, were irradiated with UV to obtain specialized transducing phages. The phages that took out the neighboring chromosomal DNA of the related gene responsible for deflective aerobic growth were identified. The in vivo cloned chromosomal sequence revealed that the mutated gene of CLIO was located at min 34.5 on the Escherichia coli linkage map and 1,599,515 on the physical map. The physical map indicated that there were 7 cistrons in the operon. We named this operon oxg10. The promoter sequence of oxg10 exhibited a possible binding site far SoxS, a transcriptional regulator that activates the transcription of various SoxRS regulon genes. Transferring the oxg10:: ${\lambda}placMu53$ mutation into the wild-type strain, RZ4500, resulted in the inhibition of normal aerobic growth, while the salute mutation in strain MO inhibited aerobic cell growth completely. The full operon sequences of oxg10 were cloned from the Excherichia coli genomic library. The mutated gene of CLl2 was identified to be a sucA gene encoding the ${\alpha}$-ketoglutarate dehydrogenase El component in the TCA cycle.

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