• Title/Summary/Keyword: Wada

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Structures of SUF Machinery Proteins and their Implications for Iron-Sulfur Cluster Biosynthesis

  • Wada, Kei;Hasegawa, Yuko;Kitaoka, Shintaro;Takahashi, Yasuhiro;Fukuyama, Keiichi
    • Proceedings of the Microbiological Society of Korea Conference
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    • 2006.05a
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    • pp.66-68
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    • 2006
  • SUF machinery in Echerichia coli, responsible for the biosynthesis of iron-sulfur clusters, is composed of six protein components (SufABCDSE), among which SufB, SufC, and SufD associate in a complex. We have determined the structures of SufA, SufC, and SufD by X-ray crystallography. SufA is a dimer, in which C-terminal segments containing essential cysteine residues (Cys-Gly-Cys) are positioned to allow coordination of an Fe-S cluster and/or an Fe atom. SufC has the overall structure similar to that of ABC-ATPase but takes an inactive form. SufD has a ${\beta}-helix$ flanked with a-helical domains. We also studied the functional roles of the residues in SufD by mutagenesis and determined the crystal structure of SufCD complex. Molecular mechanism of Fe-S cluster biosynthesis is discussed on the basis of the structural and functional evidence.

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Functional Neuroimaging in Epilepsy: FDG-PET and SPECT (간질에서의 기능적 뇌영상:양전자방출단층촬영과 단일광전자방출 단층촬영)

  • Lee, Sang-Kun;Lee, Dong-Soo
    • The Korean Journal of Nuclear Medicine
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    • v.37 no.1
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    • pp.24-33
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    • 2003
  • Finding epileptogenic zone is the most important step for the successful epilepsy surgery. F-18 fluorodeoxyglucose positron emission tomography (FDG-PET) and single photon emission computed tomography (SPECT) can be used in the localization of epileptogenic foci. In medial temporal lobe epilepsy, the diagnostic sensitivity of FDG-PET and ictal SPECT is excellent. However, detection of hippocampal sclerosis by MRI is so certain that use of FDG-PET and ictal SPECT in medial temporal lobe epilepsy is limited for some occasions. In neocortical epilepsy, the sensitivities of FDG-PET or ictal SPECT are fair. However, FDG-PET and ictal SPECT can have a crucial role in the localization of epileptogenic foci for non-lesional neocortical epilepsy. Interpretation of FDG-PET has been recently advanced by voxel-based analysis and automatic volume of interest analysis based on a population template. Both analytical methods can aid the objective diagnosis of epileptogenic foci. Ictal SPECT was analyzed using subtraction methods and voxel-based analysis. Rapidity of injection of tracers, ictal EEG findings during injection of tracer, and repeated ictal SPECT were important technical issues of ictal SPECT. SPECT can also be used in the evaluation of validity of Wada test.

Study to the Effect of Involutional Blepharoptosis Surgery Using Objective and Subjective Parameters

  • Asamura, Shinichi;Wada, Yoshitaka;Tanaka, Saiichi;Saika, Shizuya
    • Archives of Plastic Surgery
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    • v.49 no.4
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    • pp.473-478
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    • 2022
  • Background We investigate the effect of involutional blepharoptosis (IB) surgery based on dry eye symptoms by analysis using objective and subjective measures. Methods We recorded various parameters from patients that underwent levator advancement surgery for IB, totaling 125 eyes (total 65 patients, 5 unilateral, 60 bilateral). Subjective assessment comprised a questionnaire on dry eye-related quality of life score (DEQS), a summary score calculated from DEQS, and six-grade evaluation, the patient's own measure of eye comfort. Objective assessment comprised marginal-reflex distance-1 (MRD-1), measurement of tear film breakup time, and superficial keratopathy (SPK) existence by slit lamp microscope. Results Subjective assessments showed that IB patients had improvement of dry eye symptoms and eye comfort when surgery increased MRD-1. On the other hand, objective assessments showed that the presence of SPK is suspected when the postoperative MRD-1 level is 3 mm or higher. Conclusion IB surgery must not only increase MRD-1 value, but also to perform maintenance of the appropriate ocular surface condition. From our parameters, we suggest postoperative MRD-1 value should be maintained at < 3 mm to safe and effective of IB surgery.

Gene Clustering for Reuterin Production in the Probiotic Bacterium Lactobacillus reuteri $JCMll12^T$ and its Functional Importance for Viability in the Mammalian Gastrointestinal Tract

  • Morita, Hidetoshi;Masaoka, Toshio;Horikawa, Hiroshi;Oshima, Kenshiro;Suzuki, Takehito;Murakami, Masaru;Kato, Yukio;Hisamatsu, Shin;Takizawa, Tatsuya;Kanemaki, Nobuyuki;Saito, Yasuhide;Naito, Hitoyuki;Kishikawa, Seigou;Nishita, Toshiho;Fukuyama, Masafumi;Sakata, Ryoichi;Arishima, Kazuyoshi;Kiuchi, Akio;Wada, Tomonori;Fukuoka, Hideo;Shino, Masao;Chinone, Shiro;Shiba, Tadayoshi;Yoshimura, Tetsuhiko;Hattori, Masahira
    • Proceedings of the Korean Society for Applied Microbiology Conference
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    • 2004.06a
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    • pp.127-132
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    • 2004
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Channel Transfer Function Estimation based on Delay and Doppler Profile for Underwater Acoustic OFDM Communication System

  • Shiho, Oshiro;Tomohisa, Wada
    • International Journal of Computer Science & Network Security
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    • v.23 no.1
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    • pp.96-102
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    • 2023
  • In this paper, we proposed Channel Transfer Function estimation based on Delay and Doppler Profile for underwater acoustic OFDM communication system. It improved the estimation accuracy of the channel transfer function by linear time interpolation the change of Scattered Pilot (SP) insertion frequency in the time direction and the time by Delay and Doppler profile that analyzes the multipath situation of the channel investigated the performance of interpolation by simulation and report it. Previous works is inserted SP every 4 OFDM. It was effective under the environment without multipath, but it has observed that the effect of CTF compensation has been lowered in multipath channel condition. In addition to be better when inserted SP every 2 OFDM. But the amount of sending data will be decrease. Therefore, we conducted research to improve 4 OFDM with new interpolator. A computer simulation was performed as a comparison of SP inserted every 4 OFDM, SP inserted every 2 OFDM, and 4 OFDM with new interpolator. the performance of the proposed system is overwhelmingly improved, and the performance is slightly improved even 64 QAM.

Channel Transfer Function estimation based on Delay and Doppler Profiler for 5G System Receiver targeting 500km/h linear motor car

  • Suguru Kuniyoshi;Shiho Oshiro;Gennan Hayashi;Tomohisa Wada
    • International Journal of Computer Science & Network Security
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    • v.23 no.5
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    • pp.121-127
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    • 2023
  • A 500 km/h linear motor high speed terrestrial transportation service is planned to launch 2027 in Japan. In order to support 5G service in the train, the Sub-carrier spacing frequency of 30 kHz is planned to be used instead of common 15 kHz sub-carrier spacing to mitigate Doppler effect in such high-speed transportation. In addition, to increase the cell size of 5G mobile system, plural Base Station antenna will transmit the identical Down Link (DL) signal to form the expanded cell size along the train rail. In this situation, forward and backward antenna signals will be Doppler shifted by reverse direction respectively and the receiver in the train might suffer to estimate accurate Channel Transfer Function (CTF) for its demodulation. In this paper, Delay and Doppler Profiler (DDP) based Channel Estimator is proposed and it is successfully implemented in signal processing simulation system. Then the simulated performances are compared with the conventional Time domain linear interpolated estimator. According to the simulation results, QPSK modulation can be used even under severe channel condition such as 500 km/h, 2 path reverse Doppler Shift condition, although QPSK modulation can be used less than 200 km/h with conventional Channel estimator.

Gastric cancer presenting with ramucirumab-related gastrocolic fistula successfully managed by colonic stenting: a case report

  • Hiroki Fukuya;Yoichiro Iboshi;Masafumi Wada;Yorinobu Sumida;Naohiko Harada;Makoto Nakamuta;Hiroyuki Fujii;Eikichi Ihara
    • Clinical Endoscopy
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    • v.56 no.6
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    • pp.812-816
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    • 2023
  • We report a rare case of gastric cancer presenting with a gastrocolic fistula during ramucirumab and paclitaxel combination therapy that was successfully managed with colonic stenting. A 75-year-old man was admitted to our hospital with the chief complaint of melena. Esophagogastroduodenoscopy revealed a large ulcerated tumor in the lower stomach, judged by laparoscopy as unresectable (sT4bN1M0). After four cycles of first-line chemotherapy with S-1 plus oxaliplatin, the patient showed disease progression, and second-line therapy with ramucirumab and paclitaxel was started. At the end of the third cycle, the patient had gastric antral stenosis, which necessitated the placement of a gastroduodenal stent. When the patient complained of diarrhea 10 days later, esophagogastroduodenoscopy revealed a fistula between the greater curvature of the stomach and the transverse colon. The fistula was covered by double colonic stenting, with a covered metal stent placed within an uncovered metal stent, after which leakage from the stomach to the colon stopped.

Efficient simulation method for a gas inflow to the central molecular zone

  • Shin, Jihye;Kim, Sungsoo S.;Baba, Junichi;Saitoh, Takayuki R.;Chun, Kyungwon;Hozumi, Shunsuke
    • The Bulletin of The Korean Astronomical Society
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    • v.40 no.1
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    • pp.59.1-59.1
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    • 2015
  • We present hydrodynamic simulations of gas clouds that inflowing from the disk to a few hundred parsec region of the Milky Way. Realistic Galactic structures are included in our simulations by thousands of multipole expansions that describe 6.4 million stellar particles of a self-consistent Galaxy simulation (Baba, Saitoh & Wada, in prep.). We find that a hybrid multipole expansion model with two different basis sets and a thick disk correction well reproduces the overall structures of the Milky Way. We find that the nuclear ring evolves into 240 pc at T~1500 Myr, regardless of the initial size. For most of simulation runs, gas inflow rate to the nuclear region is equilibrated as ~0.02 Msun/yr, and thus accumulated gas mass and star formation activity is stabilized as $6{\times}10^7Msun$ and ~0.02M/yr, respectively. These stabilized values are in a good agreement with estimations for the CMZ. The nuclear ring is off-centered to the Galactic center by the lopsided central mass distribution of the Galaxy model, and thus an asymmetric mass distribution is arose accordingly. The lopsidedness also leads the nuclear ring to be tilted to the Galactic plane and to precess along the Galaxy rotation. In early evolutionary stage when gas clouds start to inflow and form the nuclear ring, the z-directional oscillations of the gas clouds results in the twisted, infinity-shaped nuclear ring. Since the infinity-shaped feature is transient only for first 100 Myr, the current infinity-shape observed in the CMZ may indicate that the CMZ forms quite recently.

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INTERSTELLAR DUST IN M51 FROM IRC IMAGES

  • Egusa, Fumi;Sakon, I.;Onaka, T.;Matsuhara, H.;Arimatsu, K.;Suzuki, T.;Wada, T.;The IRC team, The IRC team
    • Publications of The Korean Astronomical Society
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    • v.27 no.4
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    • pp.253-256
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    • 2012
  • We present the IRC images of M51, a pair of interacting galaxies. Given the high angular resolution (7.4") and the wide field of view (~ 10') covering almost the entire M51 system, we investigate dust properties and their connection to the spiral arm structure. We have applied image-filtering processes including the wavelet analysis to the N3 image, which traces the total stellar mass best among the IRC bands. From this filtered image, the center, arm, and interarm regions are defined. A color, or flux ratio among the MIR bands, has been measured at each pixel (3.7" in size). We find a wide variety of S7/S11 with a difference between arm and interarm regions. We also find that at some positions S11 seems to be higher than predicted by MW dust models. Estimated contributions from the stellar continuum and gas emission lines to the band are not enough to explain this discrepancy. From these results, we deduce that the PAH ionization condition and its fraction to the total dust mass in M51 are different from those in MW.

THE 18 ㎛ LUMINOSITY FUNCTION OF GALAXIES WITH AKARI

  • Toba, Yoshiki;Oyabu, Shinki;Matsuhara, Hideo;Ishihara, Daisuke;Malkan, Matt;Wada, Takehiko;Ohyama, Youichi;Kataza, Hirokazu;Takita, Satoshi
    • Publications of The Korean Astronomical Society
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    • v.27 no.4
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    • pp.335-338
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    • 2012
  • We present the $18{\mu}m$ luminosity function (LF) of galaxies at 0.006 < z < 0.8 (the average redshift is ~ 0.04) using the AKARI mid-infrared All-Sky Survey catalogue. We have selected 243 galaxies at $18{\mu}m$ from the Sloan Digital Sky Survey (SDSS) spectroscopic region. These galaxies then have been classified into five types; Seyfert 1 galaxies (Sy1, including quasars), Seyfert 2 galaxies (Sy2), low ionization narrow emission line galaxies (LINER), galaxies that are likely to contain both star formation and Active Galactic Nuclei (AGN) activities (composites), and star forming galaxies (SF) using optical emission lines such as the line width of $H{\alpha}$ or the emission line ratios of [OIII]/$H{\beta}$ and [NII]/$H{\alpha}$. As a result of constructing the LF of Sy1 and Sy2, we found the following results; (i) the number density ratio of Sy2 to Sy1 is $1.64{\pm}0.37$, larger than the results obtained from optical LF and (ii) the fraction of Sy2 in the entire AGN population may decrease with $18{\mu}m$ luminosity. These results suggest that most of the AGNs in the local universe are obscured by dust and the torus structure probably depends on the mid-infrared luminosity.