• Title/Summary/Keyword: Visualization for Quantitative Data

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Hierarchical Clustering of Gene Expression Data Based on Self Organizing Map (자기 조직화 지도에 기반한 유전자 발현 데이터의 계층적 군집화)

  • Park, Chang-Beom;Lee, Dong-Hwan;Lee, Seong-Whan
    • Proceedings of the Korean Society for Bioinformatics Conference
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    • 2003.10a
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    • pp.170-177
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    • 2003
  • Gene expression data are the quantitative measurements of expression levels and ratios of numberous genes in different situations based on microarray image analysis results. The process to draw meaningful information related to genomic diseases and various biological activities from gene expression data is known as gene expression data analysis. In this paper, we present a hierarchical clustering method of gene expression data based on self organizing map which can analyze the clustering result of gene expression data more efficiently. Using our proposed method, we could eliminate the uncertainty of cluster boundary which is the inherited disadvantage of self organizing map and use the visualization function of hierarchical clustering. And, we could process massive data using fast processing speed of self organizing map and interpret the clustering result of self organizing map more efficiently and user-friendly. To verify the efficiency of our proposed algorithm, we performed tests with following 3 data sets, animal feature data set, yeast gene expression data and leukemia gene expression data set. The result demonstrated the feasibility and utility of the proposed clustering algorithm.

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Basic ]Requirements for Spectrum Analysis of Electroencephalographic Effects of Central Acting Drugs (중추성 작용 약물의 뇌파 효과의 정량화를 위한 스펙트럼 분석에 필요한 기본적 조건의 검토)

  • 임선희;권지숙;김기민;박상진;정성훈;이만기
    • Biomolecules & Therapeutics
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    • v.8 no.1
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    • pp.63-72
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    • 2000
  • We intended to show some basic requirements for spectrum analysis of electroencephalogram (EEG) by visualizing the differences of the results according to different values of some parameters for analysis. Spectrum analysis is the most popular technique applied for the quantitative analysis of the electroen- cephalographic signals. Each step from signal acquisition through spectrum analysis to presentation of parameters was examined with providing some different values of parameters. The steps are:(1) signal acquisition; (2) spectrum analysis; (3) parameter extractions; and (4) presentation of results. In the step of signal acquisition, filtering and amplification of signal should be considered and sampling rate for analog-to-digital conversion is two-time faster than highest frequency component of signal. For the spectrum analysis, the length of signal or epoch size transformed to a function on frequency domain by courier transform is important. Win dowing method applied for the pre-processing before the analysis should be considered for reducing leakage problem. In the step of parameter extraction, data reduction has to be considered so that statistical comparison can be used in appropriate number of parameters. Generally, the log of power of all bands is derived from the spectrum. For good visualization and quantitative evaluation of time course of the parameters are presented in chronospectrogram.

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Tomographic Reconstruction of a Three-Dimensional Flow Field with Limited Interferometric Data

  • Cha, Dong-Jin
    • International Journal of Air-Conditioning and Refrigeration
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    • v.8 no.2
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    • pp.11-22
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    • 2000
  • Holographic interferometric tomography can provide reconstruction of instantaneous three-dimensional gross flow fields. The technique however confronts ill-posed reconstruction problems in practical applications. Experimental data are usually limited in projection and angular scanning when a field is captured instantaneously or under the obstruction of test models and test section enclosures. An algorithm, based on a series expansion method, has been developed to improve the reconstruction under the ill-posed conditions. A three-dimensional natural convection flow around two interacting isothermal cubes is experimentally investigated. The flow can provide a challenging reconstruction problem and lend itself to accurate numerical solution for comparison. The refractive index fields at two horizontal sections of the thermal plume with and without an opaque object are reconstructed at a limited view angle of 80$\circ$. The experimental reconstructions are then compared with those from numerical calculation and thermocouple thermometry. It confirms that the technique is applicable to reconstruction of reasonably complex, three-dimensional flow fields.

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Study of the Smoke Control Characteristics for Fire Near Jet Fans (Jet fan 근접 화재 발생 시 제연 특성 연구)

  • Kim, Jong-Yoon;Seo, Tae-Beom;Lim, Kyung-Bum;Yoo, Ji-Oh;Rie, Dong-Ho
    • Fire Science and Engineering
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    • v.21 no.1 s.65
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    • pp.82-89
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    • 2007
  • In this research, we conducted a PIV-visualization experiment to smoke control from fires by using a neighboring Jet fan at minimum distance. We also compared our experiment results with FDS numerical analysis ones. As a result of quantitative data analysis of smoke control modes against fires in tunnel, we concluded that a neighboring Jet fan should be placed at least 25 m away from its fire source in order to produce satisfactory smoke control results. Jet fan showed the best smoke-controlling performance, if placed 50 m away from its fire source. It tended to show an overspeed around the center of tunnel when it is placed more than 75 away from its fire source.

Patent Keyword Analysis using Gamma Regression Model and Visualization

  • Jun, Sunghae
    • Journal of the Korea Society of Computer and Information
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    • v.27 no.8
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    • pp.143-149
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    • 2022
  • Since patent documents contain detailed results of research and development technologies, many studies on various patent analysis methods for effective technology analysis have been conducted. In particular, research on quantitative patent analysis by statistics and machine learning algorithms has been actively conducted recently. The most used patent data in quantitative patent analysis is technology keywords. Most of the existing methods for analyzing the keyword data were models based on the Gaussian probability distribution with random variable on real space from negative infinity to positive infinity. In this paper, we propose a model using gamma probability distribution to analyze the frequency data of patent keywords that can theoretically have values from zero to positive infinity. In addition, in order to determine the regression equation of the gamma-based regression model, two-mode network is constructed to visualize the technological association between keywords. Practical patent data is collected and analyzed for performance evaluation between the proposed method and the existing Gaussian-based analysis models.

Hexagonal Grid Shadow Generation using Bézier Curves (베지어 곡선을 활용한 육각 그리드의 그림자 생성 방법)

  • Minseok Kim;Taekgwan Nam;Youngjin Park
    • Smart Media Journal
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    • v.12 no.4
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    • pp.47-57
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    • 2023
  • The hexagonal grid structure has been studied for processing and representing spatial information data in Geographic Information Systems. Visualization using a hexagonal grid has high visibility compared to other grid representation methods. However, it is difficult to effectively convey quantitative data and differences between grids depending on the geospatial data represented. In this paper, we propose a method to visually emphasize the hexagonal grid by generating shadow on the outside of the hexagonal grid. To do so, we offset the outer line segments of the hexagonal grid to be emphasized and generate a Bézier curve based on that information to determine the final shadow shape. We also apply variable transparency toward the edges of the shadow because the shadow gradually fades away from the hexagonal grid. We have shown that the proposed method can effectively generate shadow areas given not only a single hexagonal grid but also multiple hexagonal grids and can generate various shadow shapes based on user interface inputs. We apply the proposed method to Yongsan-gu, one of the districts of Seoul, and show the results of visually emphasizing it after generating shadow using the proposed method.

Mixed Convection between Inclined Parallel Plates with different Temperatures (온도차를 갖는 경사진 평행평판 내의 혼합대류 열전달)

  • Piao, R.L.;Kwon, O.B.;Bae, D.S.
    • Journal of Power System Engineering
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    • v.9 no.2
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    • pp.33-39
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    • 2005
  • Experiments are performed to study the mixed convection flow and heat transfer in an inclined parallel plates with the upper part cooled and the lower part heated uniformly. The Reynolds number ranges from $4.0{\times}10^{-3}\;to\;6.2{\times}10^{-2}$, the angle of inclination, ${\theta}$, from 0 to 45 degree from the horizontal line, and Pr of the high viscosity fluid is 909. In this paper, the PIV(Particle image velocimetry) with TLC(Thermo-sensitive liquid crystal) tracers is used for visualizing and analysis. This method allows simultaneous measurement of velocity and temperature field at a given instant of time. Quantitative data of the temperature and velocity are obtained by applying the color-image processing to a visualized image, and neural network is applied to the color-to-temperature calibration. This paper describes the methods, and presents the quantitative visualization of mixed convection. From this study, it is found that the flow pattern can be classified into three patterns which are affected by Reynolds number and the angle of inclination.

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A Bibliometric Analysis of Studies on Pediatric Acupuncture: Based on Web of Science (소아 침치료 연구에 대한 계량서지학적 분석: Web of Science를 중심으로)

  • Chan-Young Kwon
    • The Journal of Pediatrics of Korean Medicine
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    • v.38 no.1
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    • pp.10-22
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    • 2024
  • Objectives This bibliometric analysis aimed to determine the status of pediatric acupuncture research. Methods Relevant bibliographic information up to January 9, 2024, was collected through searches in the Web of Science Core Collection. Bibliographic information was preprocessed for data analysis and analyzed using VOSviewer software. Network maps of the authors and their affiliated institutions in the included studies were constructed and visualized, and clusters for each major node were identified. In addition, the latest research keywords were visualized using an overlay visualization function. Results The field of pediatric acupuncture research has shown a 20.5-fold quantitative increase in the number of publications over the past 30 years (1991 - 2023). In the field of pediatric acupuncture research, the United States has the highest productivity and influence, and South Korea ranked 7th in productivity and 10th in influence. Through keyword analysis in the field of pediatric acupuncture research, four clusters were identified. Pain management, use in pediatric oncology, and use in postoperative management were identified as important clinical topics. There is a lack of exchange among researchers in the field of pediatric acupuncture. Conclusions Pediatric acupuncture research continues to show quantitative growth and western countries have shown high productivity and influence in this field. In this study, the major keywords in the field of pediatric acupuncture research were identified, and the results can be used to establish the research direction of the Korean medicine community.

Pressure Drop and Heat Transfer Characteristics of Internal Flow of the Rectangular Tube for Automobile Heat Exchanger (차량용 열교환기 사각관 내부 흐름에서 압력강하 및 열전달 특성)

  • Kang, Hie-Chan;Jun, Gil-Woong;Kim, Kwang-Il
    • 유체기계공업학회:학술대회논문집
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    • 2006.08a
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    • pp.489-492
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    • 2006
  • The present work was performed to investigate the thermal and hydraulic characteristics of flow inside the plain and turbulator flat tubes for the automobile application. The pressure drop and heat transfer coefficient at laminar, transition and turbulent regimes were studied experimentally and numerically. The flow transition was confirmed by flow visualization and quantitative data. It is proposed equations for the friction and heat transfer coefficient in the fully developed laminar flow inside rectangular tube as function of aspect ratio.

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An Experimental Study of Developing and Fully Developed Flows in a Wavy Channel by PIV

  • Kim, Sung-Kyun
    • Journal of Mechanical Science and Technology
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    • v.15 no.12
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    • pp.1853-1859
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    • 2001
  • An experimental study is presented for a flow field in a two dimensional wavy channels by PIV. This flow has two major applications such as a blood flow simulation and the enhancement of heat transfer in a heat exchanger. While the numerical flow visualization results have been limited to the fully developed cases, existing experimental results of this flow were simple qualitative ones by smoke or dye streak test. Therefore, the main purpose of this study is to produce quantitative flow data for fully developed and developing flow regimes by the Correlation Based Correction PIV (CBC PIV) and to conjecture the analogy between flow characteristics and heat transfer enhancement with low pumping power. Another purpose of this paper is to examine the onset position of the transition and the global mixing, which results in transfer enhancement. PIV results on the Fully developed and developing flow in a wavy channel at Re=500, 1000 and 2000 are obtained. for the case Reynolds Number equals 500, the PIV results are compared with the finite difference numerical solution.

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