• 제목/요약/키워드: Variance component

검색결과 506건 처리시간 0.028초

소맥의 수수조사를 위한 표본단위의 크기와 표본수 결정 (Determination of Size and Number of Sampling Units for Spike Count in Wheat)

  • 장석환;하용웅
    • 한국작물학회지
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    • 제26권4호
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    • pp.293-297
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    • 1981
  • 맥류시험에 있어서 표본추출 체계를 확립하기 위하여 1979/80년 맥류연구소의 포장에서 실시한 몇가지 소맥재배양식에 대한 표본단위의 크기 및 주어진 정도를 위한 표본수 결정을 시도하였던 바 그 결과를 요약하면 다음과 같다. 1. 소맥의 수수에 대한 변이계수는 휴입광철파를 제외하고는 맥류수량의 평균변이계수와 거의 같았다. 2. 수수의 변이계수와 표본단위의 크기에 대한 회귀계수는 유입광철파를 제외하고 모두 1% 수준에서 유의성을 보였다. 3. 표본단위의 크기는 재배양식에 따라 차이가 크며 변이계수 15%를 허용한다면 협폭파, 관행 및 Drill 파는 각각 0.40, 0.17 및 0.11$m^2$, 로 추정되며 답리작의 유입광철파는 0.55$m^2$, 로 추정되었다. 4. 표본단위간 변이가 심하여 시험오차의 분산성분이 영인 조건하에서 CV=12%를 위해서 2반복인 경우는 구당 2개의 표본단위, 4반복민 경우는 구당 1개의 표본단위로 충분한 것으로 추정되었다.

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보통형 콤바인 부착용 유채 예취장치 개발 (III) - 유채 기계 수확 손실 절감을 위한 요인 구명 - (Development of a Rapeseed Reaping Equipment Attachable to a Conventional Combine (Ill) - Analysis of Principal Factor for Loss Reduction of Rapeseed Mechanical Harvesting -)

  • 이충근;최용;전현종;이승규;문성동;김송수
    • Journal of Biosystems Engineering
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    • 제34권2호
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    • pp.114-119
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    • 2009
  • Field test was conducted to investigate primary factors reducing rapeseed harvesting using a reciprocating cutter-bar of combine. The results showed that the correlation between crop moisture content and yield loss had a U-type, which indicated that the yield reduction increased at too high and too low crop moisture contents. The proper ranges of crop moisture contents were 27${\sim}$35%, 21${\sim}$56%, and 62${\sim}$73% in case of grain, pod and stem, respectively. Crop moisture content was negatively correlated with header loss, but positively correlated with threshing loss. In contrary, stem moisture content showed positive correlations with total loss, threshing loss and separation loss. Working speed was positively correlated with header loss. Total flow rate, pod flow rate and stem flow rate were highly correlated with threshing loss and separation loss. However, grain flow rate did not show any correlation with total loss. According to the principal component analysis, two principal components were derived as components with eigenvalues greater than 1.0. The contribution rates of the first and the second components were 52.7% and 38.9%, which accounted for 91.6% of total variance. As a contributive factor influencing total loss of rapeseed mechanical harvesting, a crop moisture content factor was greater than a crop flow rate factor. The stepwise multiple regression analysis for total loss was conducted using crop moisture content factor, crop flow rate factor and coefficient. However, the model did not show any correlation among independent and dependent factors ($R^2$=0.060).

Diagnostic performance of enzyme-linked immnosorbent assays for diagnosing paratuberculosis in cattle: a meta-analysis

  • Pak, Son-Il
    • 대한수의학회지
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    • 제44권4호
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    • pp.669-676
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    • 2004
  • To evaluate the diagnostic accuracy of two commercial ELISA tests (Allied- and CSL-ELISA) for the diagnosis of Mycobacterium paratuberculosis in cattle, Meta-analysis using English language papers published during 1990-2001 was performed. Diagnostic odds ratios (DOR) were analyzed using regression analysis together with summary receiver operating characteristic (ROC) curves. The difference in diagnostic performance between the two ELISA systems was evaluated by using linear regression. Publication bias was assessed by funnel plot and linear regression. The pooled sensitivity and specificity were 44% (95% CI, 38 to 51) and 98% (95% CI, 96 to 99) for the random-effect model. The DOR between studies was heterogeneous. The area under the fitted ROC curve (AUC) was 0.72 for the unweighted and 0.77 for the weighted model. Maximum joint sensitivity and specificity for the unweighted and weighted model from their summary ROC curve were 70% and 75%, respectively. Based on the fitted model, at a specificity of 95%, sensitivity was estimated to be 52% for the unweighted and 57% for the weighted model. From the final multivariable model study characteristic, the country was the only significant variable with an explained component variance of 13.3%. There were no significant differences in discriminatory power, sensitivity, and specificity between the two ELISA tests. The overall diagnostic accuracy of two commercial ELISA tests was moderate, as judged by the AUC, maximum joint sensitivity and specificity, and estimates from the fitted model and clinical usefulness of the tests for screening program is limited because of low sensitivity and heterogeneous of DOR. It is, therefore, recommended to use ELISA tests as a parallel testing with other diagnostic tests together to increase test sensitivity in the screening program.

An Extended Generative Feature Learning Algorithm for Image Recognition

  • Wang, Bin;Li, Chuanjiang;Zhang, Qian;Huang, Jifeng
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • 제11권8호
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    • pp.3984-4005
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    • 2017
  • Image recognition has become an increasingly important topic for its wide application. It is highly challenging when facing to large-scale database with large variance. The recognition systems rely on a key component, i.e. the low-level feature or the learned mid-level feature. The recognition performance can be potentially improved if the data distribution information is exploited using a more sophisticated way, which usually a function over hidden variable, model parameter and observed data. These methods are called generative score space. In this paper, we propose a discriminative extension for the existing generative score space methods, which exploits class label when deriving score functions for image recognition task. Specifically, we first extend the regular generative models to class conditional models over both observed variable and class label. Then, we derive the mid-level feature mapping from the extended models. At last, the derived feature mapping is embedded into a discriminative classifier for image recognition. The advantages of our proposed approach are two folds. First, the resulted methods take simple and intuitive forms which are weighted versions of existing methods, benefitting from the Bayesian inference of class label. Second, the probabilistic generative modeling allows us to exploit hidden information and is well adapt to data distribution. To validate the effectiveness of the proposed method, we cooperate our discriminative extension with three generative models for image recognition task. The experimental results validate the effectiveness of our proposed approach.

불안 장애에서 벡우울척도의 요인구조 (Factor Structure of the Beck Depression Inventory in Anxiety Disorder)

  • 양현주;김대호;장은영;한창우;박용천
    • 대한불안의학회지
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    • 제7권1호
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    • pp.16-21
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    • 2011
  • Objective : Depressive symptoms often coexist with other anxiety disorder symptoms. Furthermore, an anxiety disorder that is comorbid with a depressive disorder results in more severe symptoms and a poorer outcome prognosis. To understand the construct of depressive symptoms in anxiety disorder, this study investigated the factor structure of the Beck Depression Inventory among outpatients with anxiety disorders. Methods : All data were from psychiatric department outpatients at a university-affiliated hospital. We conducted a principal component analysis using data from 194 outpatients with DSM-IV anxiety disorders and calculated goodness-of-fit-indices. Results : Exploratory factor analysis revealed a four factor structure--Cognitive-affective symptoms (Factor 1), Somatic symptoms (Factor 2), Self-reproach (Factor 3), and Hypochondriasis/indecisiveness (Factor 4)--and a 57% total variance. This four-factor model demonstrated an acceptable level of model fit, and it fit better than did a three-factor solution from the literature on depressive disorder. Conclusion : This study's results suggest a difference in the construct of self-reported depressive symptoms in anxiety disorders. These findings also support a dimensional approach to studying anxiety and depression. Further studies may benefit from including comorbid depressive disorder and its influence on anxiety disorders.

무경운 피복작물 작부체계에서 논물의 미소동물 평가 (Evaluation of Aquatic Animals on the Water in a Rice Field with No-tillage Rice Cover Crop Cropping Systems)

  • 이영한;손연규
    • 한국토양비료학회지
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    • 제44권3호
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    • pp.371-374
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    • 2011
  • 벼 유기농업을 실천하기 위하여 무경운 논에서 피복작물로 자운영, 볏짚, 헤어리베치, 유채 및 호밀 등을 처리하고 논물의 미소동물 개체수의 변화를 검토코자 수행하였다. 이앙전 5월 30일 논물의 미소동물 개체수는 무경운 헤어리 배치 처리구가 관행, 무경운 자운영 처리, 무경운 유채 처리, 무경운 호밀 처리 및 무경운 녹비 무처리에 비해 유의적으로 많았다 (p<0.05). 이앙후 6월 20일 논물의 물벼룩과 모기유충 개체수는 관행이 무경운 처리구에 비해 유의적으로 낮았다 (p<0.05). 주성분 분석결과 관행은 무경운 처리구와 유의적으로 차이가 있었으며 무경운 처리에서는 무경운 자운영 처리와 무경운 헤어리베치 처리가 무경운 녹비 무처리, 무경운 유채 처리 및 무경운 호밀 처리구와 유의적인 차이가 있었다. 무경운 논에서 유기물 투입이 논물의 미소동물 개체수 증가에 기여하였으며 분해가 느린 호밀과 유채 보다 분해가 빠른 두과작물이 미소동물 개체수 증가에 유리하였고 벼 유기농업의 지표로 물벼룩의 개체수를 적용할 수 있을 것으로 판단된다.

Genetic characteristics of Korean Jeju Black cattle with high density single nucleotide polymorphisms

  • Alam, M. Zahangir;Lee, Yun-Mi;Son, Hyo-Jung;Hanna, Lauren H.;Riley, David G.;Mannen, Hideyuki;Sasazaki, Shinji;Park, Se Pill;Kim, Jong-Joo
    • Animal Bioscience
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    • 제34권5호
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    • pp.789-800
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    • 2021
  • Objective: Conservation and genetic improvement of cattle breeds require information about genetic diversity and population structure of the cattle. In this study, we investigated the genetic diversity and population structure of the three cattle breeds in the Korean peninsula. Methods: Jeju Black, Hanwoo, Holstein cattle in Korea, together with six foreign breeds were examined. Genetic diversity within the cattle breeds was analyzed with minor allele frequency (MAF), observed and expected heterozygosity (HO and HE), inbreeding coefficient (FIS) and past effective population size. Molecular variance and population structure between the nine breeds were analyzed using a model-based clustering method. Genetic distances between breeds were evaluated with Nei's genetic distance and Weir and Cockerham's FST. Results: Our results revealed that Jeju Black cattle had lowest level of heterozygosity (HE = 0.21) among the studied taurine breeds, and an average MAF of 0.16. The level of inbreeding was -0.076 for Jeju Black, while -0.018 to -0.118 for the other breeds. Principle component analysis and neighbor-joining tree showed a clear separation of Jeju Black cattle from other local (Hanwoo and Japanese cattle) and taurine/indicine cattle breeds in evolutionary process, and a distinct pattern of admixture of Jeju Black cattle having no clustering with other studied populations. The FST value between Jeju Black cattle and Hanwoo was 0.106, which was lowest across the pair of breeds ranging from 0.161 to 0.274, indicating some degree of genetic closeness of Jeju Black cattle with Hanwoo. The past effective population size of Jeju Black cattle was very small, i.e. 38 in 13 generation ago, whereas 209 for Hanwoo. Conclusion: This study indicates genetic uniqueness of Jeju Black cattle. However, a small effective population size of Jeju Black cattle indicates the requirement for an implementation of a sustainable breeding policy to increase the population for genetic improvement and future conservation.

Molecular analysis of genetic diversity, population structure, and phylogeny of wild and cultivated tulips (Tulipa L.) by genic microsatellites

  • Pourkhaloee, Ali;Khosh-Khui, Morteza;Arens, Paul;Salehi, Hassan;Razi, Hooman;Niazi, Ali;Afsharifar, Alireza;Tuyl, Jaap van
    • Horticulture, Environment, and Biotechnology : HEB
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    • 제59권6호
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    • pp.875-888
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    • 2018
  • Tulip (Tulipa L.) is one of the most important ornamental geophytes in the world. Analysis of molecular variability of tulips is of great importance in conservation and parental lines selection in breeding programs. Of the 70 genic microsatellites, 15 highly polymorphic and reproducible markers were used to assess the genetic diversity, structure, and relationships among 280 individuals of 36 wild and cultivated tulip accessions from two countries: Iran and the Netherlands. The mean values of gene diversity and polymorphism information content were 0.69 and 0.66, respectively, which indicated the high discriminatory power of markers. The calculated genetic diversity parameters were found to be the highest in wild T. systola Stapf (Derak region). Bayesian model-based STRU CTU RE analysis detected five gene pools for 36 germplasms which corresponded with morphological observations and traditional classifications. Based on analysis of molecular variance, to conserve wild genetic resources in some geographical locations, sampling should be performed from distant locations to achieve high diversity. The unweighted pair group method with arithmetic mean dendrogram and principal component analysis plot indicated that among wild tulips, T. systola and T. micheliana Hoog exhibited the closest relationships with cultivated tulips. Thus, it can be assumed that wild tulips from Iran and perhaps other Middle East countries played a role in the origin of T. gesneriana, which is likely a tulip species hybrid of unclear origin. In conclusion, due to the high genetic variability of wild tulips, they can be used in tulip breeding programs as a source of useful alleles related to resistance against stresses.

남빙양 krill이 흰쥐의 혈청 지질성분 및 알부민/글로불린 비에 미치는 영향 (Influences of Antarctic Ocean Krill (Euphausia superba) on Lipid Components and A/G Ratio in Rats)

  • 오다영;진동혁;강동수;이영근;김한수
    • 한국환경과학회지
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    • 제27권11호
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    • pp.991-997
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    • 2018
  • The aim of the study were to investigate the influences of krill (Euphausia superba) meal on the body weight, lipid metabolism functional improvement, blood glucose level, protein component in the sera of rats which fed experimental diets for 5 weeks. Serum concentrations of total cholesterol, Low-Density Lipoprotein (LDL)-cholesterol, free cholesterol, triglyceride (TG), phospholipid (PL) and blood glucose were higher in the control diet group (G1 group) than the control diet plus 10% krill meal group (G2 group), the control diet plus 20% krill meal group (G3 group), the control diet plus 30% krill meal group (G4 group), and a general dose and time independent one-way analysis of variance was performed to assess efficacy. Conversely depending on the content of krill meal for the High-Density Lipoprotein (HDL)-cholesterol level, it showed higher results. The concentrations of total protein, albumin and globulin in sera, there were not significant difference among the groups (p<0.05). The results indicate that a krill meal diet effectively inhibited increases in lipid elevation, blood glucose level in the sera of rats.

Genetic diversity of Indonesian cattle breeds based on microsatellite markers

  • Agung, Paskah Partogi;Saputra, Ferdy;Zein, Moch Syamsul Arifin;Wulandari, Ari Sulistyo;Putra, Widya Pintaka Bayu;Said, Syahruddin;Jakaria, Jakaria
    • Asian-Australasian Journal of Animal Sciences
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    • 제32권4호
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    • pp.467-476
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    • 2019
  • Objective: This research was conducted to study the genetic diversity in several Indonesian cattle breeds using microsatellite markers to classify the Indonesian cattle breeds. Methods: A total of 229 DNA samples from of 10 cattle breeds were used in this study. The polymerase chain reaction process was conducted using 12 labeled primers. The size of allele was generated using the multiplex DNA fragment analysis. The POPGEN and CERVUS programs were used to obtain the observed number of alleles, effective number of alleles, observed heterozygosity value, expected heterozygosity value, allele frequency, genetic differentiation, the global heterozygote deficit among breeds, and the heterozygote deficit within the breed, gene flow, Hardy-Weinberg equilibrium, and polymorphism information content values. The MEGA program was used to generate a dendrogram that illustrates the relationship among cattle population. Bayesian clustering assignments were analyzed using STRUCTURE program. The GENETIX program was used to perform the correspondence factorial analysis (CFA). The GENALEX program was used to perform the principal coordinates analysis (PCoA) and analysis of molecular variance. The principal component analysis (PCA) was performed using adegenet package of R program. Results: A total of 862 alleles were detected in this study. The INRA23 allele 205 is a specific allele candidate for the Sumba Ongole cattle, while the allele 219 is a specific allele candidate for Ongole Grade. This study revealed a very close genetic relationship between the Ongole Grade and Sumba Ongole cattle and between the Madura and Pasundan cattle. The results from the CFA, PCoA, and PCA analysis in this study provide scientific evidence regarding the genetic relationship between Banteng and Bali cattle. According to the genetic relationship, the Pesisir cattle were classified as Bos indicus cattle. Conclusion: All identified alleles in this study were able to classify the cattle population into three clusters i.e. Bos taurus cluster (Simmental Purebred, Simmental Crossbred, and Holstein Friesian cattle); Bos indicus cluster (Sumba Ongole, Ongole Grade, Madura, Pasundan, and Pesisir cattle); and Bos javanicus cluster (Banteng and Bali cattle).