• Title/Summary/Keyword: VIABILITY ANALYSIS

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현미경 영상 기반 암세포 생존력 관련 표현형 추출 (Microscopic Image-based Cancer Cell Viability-related Phenotype Extraction)

  • 강미선
    • 대한의용생체공학회:의공학회지
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    • 제44권3호
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    • pp.176-181
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    • 2023
  • During cancer treatment, the patient's response to drugs appears differently at the cellular level. In this paper, an image-based cell phenotypic feature quantification and key feature selection method are presented to predict the response of patient-derived cancer cells to a specific drug. In order to analyze the viability characteristics of cancer cells, high-definition microscope images in which cell nuclei are fluorescently stained are used, and individual-level cell analysis is performed. To this end, first, image stitching is performed for analysis of the same environment in units of the well plates, and uneven brightness due to the effects of illumination is adjusted based on the histogram. In order to automatically segment only the cell nucleus region, which is the region of interest, from the improved image, a superpixel-based segmentation technique is applied using the fluorescence expression level and morphological information. After extracting 242 types of features from the image through the segmented cell region information, only the features related to cell viability are selected through the ReliefF algorithm. The proposed method can be applied to cell image-based phenotypic screening to determine a patient's response to a drug.

Comparative Studies on Cotton Seed Germinability with Tetrazolium Viability Test and X-ray Contrast Methods

  • Na, Young-Wang;Shim, Sang-In;Chung, Jung-Sung;Rho, Il-Rae;Kim, Seok-Hyeon
    • 한국작물학회지
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    • 제59권2호
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    • pp.188-193
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    • 2014
  • Seed viability testing provides valuable information for assessing seed lot germinability. However, most testing methods require destruction of seed prior to test. Because the dissected seeds for viability test cannot be used further evaluation, the nondestructively X-ray photography technique that can be applied for the evaluation of seed quality has been developed. In order to know the validity and accuracy of X-ray photography technique in seed evaluation test that conducted to remove the abnormal seed from a seed lot, we have compared the results from tetrazolium viability test, germination test and X-ray contrast method in cotton. Metallic salts treatment increased the efficiency of X-ray photographic method by enhancing the penetration of X-ray in abnormal or damaged seeds rather than normal seeds that have strong and well-organized tissues in seed. Cotton seeds presoaked for 16 hr in distilled water followed by soaking into metallic salt solution (5% NaI in water) for 60 min were easily classified seeds into dead seed and viable seed based on the radiography images obtained by X-ray radiation. We concluded that soft X-ray photography was reliable to find out the various defective characters due to heat and mechanical damage of seeds.

개 정맥의 동결 및 융해후 정자의 생존성 및 수정능획득 판정을 위한 HOS test 및 CTC test (Studies on HOSS test and CTC test for Viability and Capacitation of Frozen-thawed Canine Sperm)

  • 김용준;지동범;오홍근
    • 한국임상수의학회지
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    • 제17권2호
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    • pp.431-437
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    • 2000
  • Evaluation of viability and capacitation of canine sperm is of great importance to deter- mine good condition for freezing canine semen and consequently to improve conception rate by arti-ficial insemination. Semen were collected from nine male dots which had been proved to be fertile in the post and the semen were treaded for freezing procedure. Semen were thawed at 37$^{\circ}C$ for 30 seconds. In this study, hypoosmotic swelling(HOS) test and chlortetracycline(CTC) test were per- formed to evaluate post-thaw viability and capacitated status of sperm, respectively. In HOS test far canine sperm, the highest percentage of curled sperm was shown at 60 mOsm. In HOS test for canine semen, there were considerably significant correlation between HOS values and sperm motil- ity(r=0.9064, p<0.01) and converse correlation between HOS values and sperm abnormality(r=- 0.6905, p<0.05). The sperm viability and HOS-values for chilled extended semen were significantly decreased from 0 to 72 hours during storage at 5$^{\circ}C$ (p<0.05). Of the media added to canine semen after thawing, the most capacitated sperm were shown in CCM(p<0.01), and then This Fructose Cit- rate(TFC) medium with calcium from 3 hours after incubation with media. It was concluded that HOS test is of great value to determine the viability and motility of canine sperm, whereas CTC test is usable to determine the capacitated status. Consequently, both tests were thought to be useful as the additional tests to standard semen analysis.

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전기천공시스템에서 Propidium Iodide와 Yo-Pro-1의 농도에 따른 세포 생존율과 전달효율 평가 (Evaluation of Cell Viability and Delivery Efficiency in Electroporation System According to the Concentrations of Propidium Iodide and Yo-Pro-1)

  • 배서준;임도진
    • Korean Chemical Engineering Research
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    • 제57권6호
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    • pp.898-906
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    • 2019
  • 본 연구에서는 전기천공시스템에서 형광 염료를 사용한 세포 생존율 평가와 형광 염료를 전달 물질로 하여 세포 내부로의 전달 효율 평가를 통해 세포의 생존율과 전달 물질의 전달 효율 평가에 사용하기 적합한 형광 염료의 선정 및 사용에 적절한 농도에 대한 가이드라인을 제시 할 수 있는 기초 연구를 수행하였다. 형광 염료로는 Propidium Iodide와 Yo-Pro-1을 사용하였다. Propidium Iodide과 Yo-Pro-1을 사용한 세포 생존율 평가와 전달 효율의 평가에서 각 형광염료의 유세포 분석 히스토그램의 모양은 형광 염료의 종류와 사용한 농도에 따라 다른 것을 확인하였다. 이는 사용하는 형광 염료의 특성과 연관이 있는 것으로 이 결과를 통해 세포 분석에 사용하는 형광 염료의 특성에 따라 분석 결과가 달라지는 것을 알 수 있었다. 형광 염료 자체가 세포 생존률에 미치는 영향은 크지 않음을 확인하였다. 또한 두 종류 이상의 형광 염료를 사용하여 분석을 하는 경우 발생할 수 있는 형광 신호 간의 간섭 영향을 확인하였다. 간섭의 영향은 Yo-Pro-1의 농도가 높을수록 큰 것으로 확인되었으며 Propidium Iodide의 농도는 형광 신호의 간섭에 큰 영향을 미치지 않음을 확인하였다. 본 연구를 통해 형광 염료의 종류와 농도에 따라 세포 생존율 평가와 전달 효율의 평가 결과가 영향을 받는 것을 확인했으며 이는 형광 염료의 특성과 연관이 있는 것으로 판단된다. 또한, 본 연구 결과를 토대로 세포 생존율 평가와 전달 효율 평가에 적절한 형광 염료의 선정과 사용에 적절한 농도를 제시하였다.

인진butanol 분획의 TLC추출성분이 Fas-mediated Apoptosis에 미치는 영향 (Effect of Injin Butanol Fraction with Thin Layer Chromatography on Fas-mediated Apoptosis)

  • 박용진;김영철;이장훈;우흥정
    • 대한한의학회지
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    • 제23권2호
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    • pp.57-69
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    • 2002
  • Objective: The aim of this study is to investigate the effect of Injin butanol fractions with Thin Layer Chromatography on Fas-mediated Apoptosis. Method: Injin-butanol fraction separated by TLC. MIT assay, cell cycle analysis, Caspase-3 protease assay, DNA fragmentation assay and quantitative RT-PCR were performed to evaluate the effects of TLC extraction of lnjin-butanol fraction on cell viability, cell cycle progression and apoptosis. Results: Scopoletin, luteolin, apigenin and unknown powder was isolated by TLC. Fas-mediated apoptosis analysis shows that scopoletin has inhibiting function on apoptosis. Caspase- 3 protease assay analysis shows that scopoletin inhibits activity of caspase-3. Quantitative RT-PCR analysis shows that no activity on caspase-3, but apoptosis inhibition cytokine -Bcl-2- is activated, and apoptosis activating cytokine -Bax- is unactivated. Conclusion: These results show that each fraction of Injin-butanol TLC extraction, especially scopoletin, acts as a protective function on liver cell viability, and inhibitory function on apoptosis. (J Korean Oriental Moo 2002;23(2):57-69)

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Effects of Acute Metal Exposures on the Viability and mRNA Expression of Metallothionein in Hemibarbus mylodon Fry

  • Bang, In-Chul;Cho, Young-Sun;Lee, Il-Rho;Nam, Yoon-Kwon
    • 생태와환경
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    • 제40권4호
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    • pp.489-494
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    • 2007
  • Transcriptional modulation of metallothionein (MT) during acute metal exposures (cadmium, copper or zinc) was examined in fry of Hemibarbus mylodon, a threatened fish species in Korean peninsula. Viability of H. mylodon fry was most affected by copper exposure (up to 79% of mortality at 1 ppm for 48 hours) and considerably by cadmium exposure (21 to 54% of mortality). On the other hand, Zn showed the least adverse effect on the viability (0 to 13% of mortality) of this species. Based on the semi-quantitative RT-PCR analysis, the stimulation of MT mRNA in response to metal exposures followed generally in a dose-dependent fashion where cadmium was the most potent inducer for the induction of MT transcripts in fry (up to more than 5-fold) while the lowest response was observed in zinc-exposed group (2-fold at maximum). From the exposure using environmentally realistic doses of cadmium (0 to 0.05 ppm for 24 hours), MT expression at mRNA level was also sensitively modulated toward upregulation up to more than 3-fold as relative to non-exposed control. Results from the present study would be a good basis for understanding the adaptive capacity and stress physiology of this endangered fish species during metal pollution.

인진분획물이 인체간세포의 $TGF{\beta}1-induced$ Apoptosis에 미치는 영향 (Effects of Five Fractions of Artemisia capillaris THUNB on $TGF{\beta}1-induced$ Apoptosis in HepG2 Cells)

  • 이지현;이장훈;우홍정
    • 대한한의학회지
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    • 제21권1호
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    • pp.53-61
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    • 2000
  • Objectives: This study was camed out to examine the effect of five fractions of aqueous extract from Artemisia capillaris THUNB(ACT), on TGF, 1-induced apoptosis, cell viability, cell cycle progression and mRNA expression of apoptosis-related genes in human hepatocyte cell line HepG2. Methods: This study employed Tryphan blue exclusion assay, DNA fragmentation assay, Cpp32 protease activity assay and Quantitative RT-PCR analysis. Results: In the Tryphan blue exclusion assay, the butanol fraction of ACT with $TGF{\beta}$, l showed magnificent (Nice word, ut is it appropriate in a medical abstract\ulcorner) viability and the H2O fraction of ACT with $TGF{\beta}$, l also showed higher viability than only $TGF{\beta}$, l-treated group. DNA fragmentation assay showed that the butanol fraction and the H2O fraction carried inhibitory effects on apoptosis induction, with the butanol fraction displaying greater effects. The Cpp32 protease activity assay showed that the butanol fraction decreased Cpp32 protease activity. The H2O fraction of ACT had no significant effect on the Cpp32 protease activity. Quantitative RT-PCR showed that the butanol fraction suppressed Bax, p 15/INK4B, p21/Waf1, PAI-1 and increased Bcl-2 gene. Conclusions: The data shows that butanol fraction of ACT increases the hepatocyte viability and has the hepatocellular protective effect by the suppression of $TGF{\beta}$, l induced-apoptosis through gene regulation.

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Effects of the Insect Growth Regulator Dimilin on the Survival Rate of Larvae, Adults, and Egg Viability of Tigriopus japonicus Mori (Copepoda ; Harpacticoida)

  • Choi Kyung-Hwa;Suh Myung-Sook;Kim Chang-Hyun
    • Environmental Sciences Bulletin of The Korean Environmental Sciences Society
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    • 제1권1호
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    • pp.61-67
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    • 1997
  • The effects of Insect growth regulator Dimilin which interfere with the synthesis of chitin in the cuticle of insect larvae were investigated at various concentrations using the copepod larvae of Tigriopus japonicus Mori. The larvae were cultured at control, 1, 5, 10, 20, 50, and 100 ppb Dimilin solutions and three replicate experiment were carried out to give correct analysis. Lethal effects of Dimilin on larvae of T. japonicus occurred above 1 ppb Dimilin solution after 8 days. $LC_{50}$ of larvae was 50 ppb Dimilin on the 4th day. Lethal effects of Dimilin on adults or T. japonicus occurred above 20 ppb Dimilin solution after 13 days. $LC_{50}$ of adults was 50 ppb Dimilin on the 12 days. Egg viability has little relation to Dimilin solution concentrations.

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Effects of the Insect Growth Regulator Dimilin on the Survival Rate of Larvae, Adults, and Egg Viability of Tigriopus japonicus Mori (Copepoda ; Harpacticoida)

  • Kyung-Hwa Choi;Myu
    • 한국환경과학회지
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    • 제1권1호
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    • pp.61-67
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    • 1992
  • The effects of insect growth regulator Dimilin which interfere with the synthesis of chitin in the cuticle of insect larvae were investigated at various concentrations using the copepod larvae of Tigriopus japoniu Mori. The larvae were cultured at control, 1, 5, 10, 활, 50, and 100 pub Dimilin solutions and three replicate experiment were carried out to give correct analysis. Lethal effects of Dimilin on larvae of T japoniu occurred above 1 ppb Dimilin solution after 8 days. LC50 of larvae was 50 ppb Dimilin on the 4th day. Lethal effects of Dimilin on adults of T. japoniu occurred above 1 ppb Dimilin solution after 13 days. LC50 of adults was 50 ppb Dimilin on the 12 days. Egg viability has little relation to Dimilin solution concentrations.

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러시아-우크라이나 전쟁사례 분석을 통한 생존성 분야 함정 설계 및 시험평가 발전방안 (A Study on the Development of Test Evaluation in the Naval Ship Survival Field through the Analysis of Russia-Ukraine War Cases)

  • 안병준;김태훈
    • 시스템엔지니어링학술지
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    • 제20권1호
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    • pp.26-33
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    • 2024
  • Since the positive viability field remains the way it was in the 2010s, the ship test evaluation in the viability field is being applied to withstand the attack on an extremely limited kind of weapon system even the latest ship. In response, this paper analyzed and considered maritime warfare during the Russia-Ukraine War, which is an example of the latest war paradigm shift, and diagnosed the status of test evaluation in the field of Naval ship survivability to derive realistic development measures such as reflecting threat development trends, strengthening attack and damage control evaluation, confirming ship viability limits, and realizing test evaluation plans.