• Title/Summary/Keyword: Unidentified species

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Morphological and Molecular Identification of Two Macrourid Species (Gadiformes) Collected by the Korean Observer from the Southern Ocean (남극해에서 한국 옵서버에 의해 채집된 민태과(대구목) 어류 2종의 형태 및 분자동정)

  • Seo, Min-Ju;Kim, Jin-Koo;Chung, Sangdeok
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.55 no.6
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    • pp.967-972
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    • 2022
  • We investigated the molecular and morphological traits of 338 individual macrourids collected from the Southern Ocean (FAO area number, 88.1 and 88.3) between 2021 and 2022 by Korean bottom trawls. We first identified them as Macrourus caml and Macrourus whitsoni based on morphological traits, such as the number of pelvic fin rays (PF) and the rows of lower jaw teeth (LJT). However four individuals showed uncategorizable morphological characteristics such as PF and LJT numbers that overlapped between the two species. Subsequently, we obtained and analyzed 509 bp of the mtDNA COI sequences of 49 individuals, including the four unidentified individuals, and found only one single nucleotide polymorphism (SNP) that distinguished the two species. Finally, using our molecular identification key, we confirmed that each two individuals were misidentified as M. whitsoni and M. caml reversely. Our results suggest that the number of PF and LJT should be investigated together to accurately identify the two species.

Molecular identification of selected parrot eggs using a non-destructive sampling method

  • Jung-Il Kim;Jong-Won Baek;Chang-Bae Kim
    • Korean Journal of Environmental Biology
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    • v.41 no.2
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    • pp.145-166
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    • 2023
  • Parrots have been threatened by global trade to meet their high demand as pets. Controlling parrot trade is essential because parrots play a vital role in the ecosystem. Accurate species identification is crucial for controlling parrot trade. Parrots have been traded as eggs due to their advantages of lower mortality rates and more accessible transport than live parrots. A molecular method is required to identify parrot eggs because it is difficult to perform identification using morphological features. In this study, DNAs were obtained from 43 unidentified parrot eggs using a non-destructive sampling method. Partial cytochrome b (CYTB) gene was then successfully amplified using polymerase chain reaction (PCR) and sequenced. Sequences newly obtained in the present study were compared to those available in the GenBank by database searching. In addition, phylogenetic analysis was conducted to identify species using available sequences in GenBank along with sequences reported in previous studies. Finally, the 43 parrot eggs were successfully identified as seven species belonging to two families and seven genera. This non-destructive sampling method for obtaining DNA and molecular identification might help control the trade of parrot eggs and prevent their illegal trade.

Infection status with trematode metacercariae in pond smelts, Hypomesus olidus

  • Nam, Hae-Seon;Sohn, Woon-Mok
    • Parasites, Hosts and Diseases
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    • v.38 no.1
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    • pp.37-39
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    • 2000
  • Many Koreans usually eat raw pond smelts, Hypomesus olidus, in the winter. This study was performed to evaluate the infection status with trematode metacercariae in pond smelts from January 1998 through February 1999. Among 1,305 fish collected, 459 were purchased from wholesale dealers in Chinchon-gun, Chungchongbuk-do, and the rest of them were caught with a casting net in Soyangho (Lake), Taehoman (Bay) and Paekkokchosuchi(Pond). Seven species of trematode metacercariae including two unidentified ones were detected from 1,305 pond smelts. The number of detected trematode metacercariae according to the species are as follow: Clonorchis sinensis 8, Holostephanus nipponicus 7, Cyathocotvle orientalis 24, DipLostomum sp. 14, and Metorchis orientalis 7. From the above results, it was confirmed that H. olidus plays a role as the second intermediate host of some kinds of trematode including C. sinensis in Korea. Our report shows possible clonorchiasis caused by eating raw pond smelts.

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Diatom flora of genus Stauroneis (Bacillariophyta) from mainly the mountain peatlands of Korea

  • Joh, Gyeongje
    • Journal of Ecology and Environment
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    • v.37 no.4
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    • pp.257-270
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    • 2014
  • In a survey of periphytic and benthic diatoms in Korea, diatoms of genus Stauroneis were found to be widely distributed over freshwaters, rivers and streams, lakes and reservoir, wetlands in lowland and mountain areas, and even subaerial terrestrial habitats. However, it is clear that Stauroneis diatoms prefer peatlands, which can be more or less acidic or oligotrophic environments in freshwaters. In this study, Staurones diatoms were collected mainly from mountain peatlands. Twenty five taxa were confirmed to be species, while some specimens remain unidentified. Approximately twenty species have been reported in Korea in the past, but these are largely S. anceps Ehremberg sensu lato, S. phoenicenteron (Nitzsch) Eherenberg sensu lato, and their infraspecies variety or forma. Sixteen of the twenty five Stauroneis taxa found in this survey are reported for the first time in Korea.

Classification of Fungi Isolated from Telephones (전화기(電話機)에서 분리(分離)한 진균(眞菌)의 분류(分類))

  • You, Kwan-Hi;Choi, Young-Hee;Chai, Hee-Byung
    • The Korean Journal of Mycology
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    • v.9 no.3
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    • pp.147-151
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    • 1981
  • During the period of June 15, 1978 to February 28, 1979 fungi were isolated from 101 public and home telephones in 6 different cities and classified. Total 203 isolates were obtained and classified into 8 genera and 6 species, however 44 of the isolates were unidentified. Penicillium spp. were frequently found. Forty isolates were derivated from coffee shops, 51 from street public telephones, 35 from stores, 26 from offices and 19 from homes. Also 27 were from Seoul, 30 from Daegu, 46 from Gunsan, 82 from Chunju and 18 from Jaeju. Twenty-seven were isolated in summer and 174 in winter. From the above observations, it is concluded that the transimitters are heavily colonized with various species of fungi and some of them are pathogens. The rates of colonization appeared to be various by locations and seasons.

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Water Trophic States and Biological Indicators of Phytoplankton at Six Reservoirs in Gyeonggi-do (경기도 6개 호소의 수질 영양단계 및 지표종에 관한 연구)

  • Lim, An-Suk;Lee, Ok-Min
    • ALGAE
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    • v.22 no.2
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    • pp.69-85
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    • 2007
  • From six reservoirs in Gyeonggi-do, we have collected the distribution and standing crop of phytoplankton since Nov. 2005 through Sep. 2006. As a result, the phytoplankton appeared totally 340 taxa belong to 7 classes, 15 orders, 5 suborders, 32 families, 4 subfamilies, 84 genera, 283 species, 43 varieties, 9 forms and 5 unidentified species. The standing crop was shown as minimum was 0.3 × 106 cells and maximum was 5,950 × 106. The relation of standing crop with TN, TP and Chl-a showed as positive. Total 12 taxa including 2 taxa of blue-green algae occurred to every seasons at six lakes, and it was thought that they distributed in mesotrophic state. Also, Achnanthes minutissima, Aulacoseira granulata, Eudorina elegans, Gloeocystis ampla, Pandorina morum, Pediastrum simplex var. duodenarium, Scenedesmus ecornis were regarded as the indicators of eutrophic state. From the estimation of LTSI and TSI, it was shown that the rest of lakes except for Idong reservoir of winter were eutrophic states.

Ultrastructural Description of Some Wood Degrading Fungi at Light Microscopic and Scanning Electron Microscopic Levels (전자현미경 수준에서의 목재부후균의 미세구조학적 고찰)

  • Lee, Yang-Soo
    • Applied Microscopy
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    • v.34 no.4
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    • pp.271-276
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    • 2004
  • The genus of Biscogniauxia, well known wood degrading fungi, is a member of the Xylariales, which has woody to carbonaceous, brown to dark brown stromata. Daldinia concentrica and Biscogniauxia sp. isolated from heavily decayed hardwood, are precisely described under light microscopic and scanning electron microscopic level. Daldinia concentrica will be the first ultrastructural description in Korea. The unidentified species collected, having small size of ascospores $11.4\;15.6{\times}9.6\;12.0{\mu}m$ with full germ slit, are taxono-mically compared with similar species found in Korea.

The Spider Fauna of DMZ of Chulwon Areas in Kangwon-do, Korea (강원도 철원지역 DMZ의 거미상)

  • Kim, Joo-Pil
    • The Korean Journal of Soil Zoology
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    • v.4 no.2
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    • pp.69-73
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    • 1999
  • The spider fauna of DMZ(Demilitarized Zone) of Chulwon in Kangwon-do, Korea was investigated. As a result, the authors present a list of 54 species of 54 genera in 14 families (2 unidentified species newly known to Korea; Evarch sp(C)., Helicius sp. (A)) and revise Asianellus festivus of the unrecorded genus to be transferred from the genus Phlegra from Korea.

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Development of Species-specific Primers for Rapid Detection of Phellinus linteus and P. baumii

  • Kim, Mun-Ok;Kim, Gi-Young;Nam, Byung-Hyouk;Jin, Cheng-Yun;Lee, Ki-Won;Park, Jae-Min;Lee, Sang-Joon;Lee, Jae-Dong
    • Mycobiology
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    • v.33 no.2
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    • pp.104-108
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    • 2005
  • Genus Phellinus taxonomically belongs to Aphyllophorales and some species of this genus have been used as a medicinal ingredients and Indian folk medicines. Especially, P. linteus and morphological-related species are well-known medicinal fungi that have various biological activities such as humoral and cell-mediated, anti-mutagenic, and anti-cancer activities. However, little is known about the rapid detection for complex Phellinus species. Therefore, this study was carried out to develop specific primers for the rapid detection of P. linteus and other related species. Designing the species-specific primers was done based on internal transcribed spacer sequence data. Each primer set detected specifically P. linteus (PL2/PL5R) and P. baumii (PB1/PB4R). These primer sets could be useful for the rapid detection of specific-species among unidentified Phellinus species. Moreover, restriction fragment length polymorphism analysis of the ITS region with HaeIII was also useful for clarifying the relationship between each 5 Phellinus species.

A study on the characteristics of fish community in the coastal water of the Five West Sea Islands in Korea (서해 5도 주변해역의 어류군집 특성에 관한 연구)

  • YOUN, Byoung il;CHOI, Dong Hyuk;IM, Yang Jae;KIM, Jung Nyun;KIM, Maeng Jin
    • Journal of the Korean Society of Fisheries and Ocean Technology
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    • v.56 no.3
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    • pp.213-222
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    • 2020
  • Species composition and seasonal variations of fish in the Five West Sea Islands in Korea, were investigated by using otter trawls and bongo nets from 2014 to 2015. During the surveyed period using an otter trawl, a total of 53 species, 147,253 ind./㎢ and 2,721,296 g/㎢ of fish were collected by otter trawls. The individual dominant species were Chaeturichthys stigmatias (30.3%), Coilia nasus (18.2%), Engraulis japonicus (12.3%), and Setipinna tenuifilis (12.2%). Moreover, the biomass dominant species in biomass were Liparis tanakae (21.3%), Beringraja pulchra (18.5%), Engraulis japonicus (8.3%) and Okamejei kenojei (8.1%). Eggs by bongo nets included 1,748 ind./1,000 ㎥ of Engraulis japonicus and 64,691 ind./1,000 ㎥ of unidentified species. A total of 15 species and 2,015 ind./1,000 ㎥ of fish larvae were collected, and the dominant species were Johnius belengerii and Pholis fangi.