• Title/Summary/Keyword: Three-Dimensional Network Structures

Search Result 55, Processing Time 0.046 seconds

NMR Studies on Turn Mimetic Analogs Derived from Melanocyte-stimulating Hormones

  • Cho, Min-Kyu;Kim, Sung-Soo;Lee, Myung-Ryul;Shin, Joon;Lee, Ji-Yong;Lim, Sung-Kil;Baik, Ja-Hyun;Yoon, Chang-Ju;Shin, In-Jae;Lee, Weon-Tae
    • BMB Reports
    • /
    • v.36 no.6
    • /
    • pp.552-557
    • /
    • 2003
  • Oligomers with $\alpha$-aminooxy acids are reported to form very stable turn and helix structures, and they are supposed to be useful peptidomimetics for drug design. A recent report suggested that homochiral oxa-peptides form a strong eight-member-ring structure by a hydrogen bond between adjacent aminooxy-acid residues in a $CDCl_3$ solution. In order to design an $\alpha$-MSH analog with a stable turn conformation, we synthesized four tetramers and one pentamer, based on $\alpha$-MSH sequence, and determined the solution structures of the molecules by two-dimensional NMR spectroscopy and simulated annealing calculations. The solution conformations of the three peptidomimetic molecules (TLV, TDV, and TLL) in DMSO-$d_6$ contain a stable 7-membered-ring structure that is similar to a $\gamma$-turn in normal peptides. Newly-designed tetramer TDF and pentamer PDF have a ball-type rigid structure that is induced by strong hydrogen bonds between adjacent amide protons and carbonyl oxygens. In conclusion, the aminooxy acids, easily prepared from natural or unnatural amino acids, can be employed to prepare peptidomimetic analogues with well-defined turn structures for pharmaceutical interest.

Identification of Genus Triadinium for Plankton Monitoring Network (플랑크톤 모니터링 네트워크를 위한 Triadinium속의 동정)

  • Yeo, Hwan-Goo
    • Proceedings of the KAIS Fall Conference
    • /
    • 2009.05a
    • /
    • pp.842-844
    • /
    • 2009
  • The major group which contains all the organisms that are commonly termed Dinoflagellates is called the division Pyrrophyta or Dinophyta in botanical systems and the order Dinoflagellida or Dinoflagellata in zoological systems. Most dinoflagellates are biflagellated solitary planktonic cells. A taxonomic survey of the dinoflagellate family, Triadiniaceae Dodge was conducted for plankton monitoring network in the coastal waters of Korea. Identification of species in water samples was usually done by using differential interference contrast (DIC), which revealed especially well lighted thecal structures. For the apparent three-dimensional image, scanning electron microscope (SEM) was used. Two species were identified and described, which were Triadinium orientale(Lindemann)Dodge and Triadinium sphaericum(Murray and Whitting)Dodge.

  • PDF

Biomimetics of the extracellular matrix: an integrated three-dimensional fiber-hydrogel composite for cartilage tissue engineering

  • Coburn, Jeannine;Gibson, Matt;Bandalini, Pierre Alain;Laird, Christopher;Mao, Hai-Quan;Moroni, Lorenzo;Seliktar, Dror;Elisseeff, Jennifer
    • Smart Structures and Systems
    • /
    • v.7 no.3
    • /
    • pp.213-222
    • /
    • 2011
  • The native extracellular matrix (ECM) consists of an integrated fibrous protein network and proteoglycan-based ground (hydrogel) substance. We designed a novel electrospinning technique to engineer a three dimensional fiber-hydrogel composite that mimics the native ECM structure, is injectable, and has practical macroscale dimensions for clinically relevant tissue defects. In a model system of articular cartilage tissue engineering, the fiber-hydrogel composites enhanced the biological response of adult stem cells, with dynamic mechanical stimulation resulting in near native levels of extracellular matrix. This technology platform was expanded through structural and biochemical modification of the fibers including hydrophilic fibers containing chondroitin sulfate, a significant component of endogenous tissues, and hydrophobic fibers containing ECM microparticles.

The Establishment of Walking Energy-Weighted Visibility ERAM Model to Analyze the 3D Vertical and Horizontal Network Spaces in a Building (3차원 수직·수평 연결 네트워크 건축 공간분석을 위한 보행에너지 가중 Visibility ERAM 모델 구축)

  • Choi, Sung-Pil;Piao, Gen-Song;Choi, Jae-Pil
    • Journal of the Architectural Institute of Korea Planning & Design
    • /
    • v.34 no.11
    • /
    • pp.23-32
    • /
    • 2018
  • The purpose of this study is to establish a walking energy weighted ERAM model that can predict the pedestrian volume by the connection structure of the vertical and horizontal spaces within a three-dimensional building. The process of building a walking-energy weighted ERAM model is as follows. First, the spatial graph was used to reproduce three-dimensional buildings with vertical and horizontal spatial connection structures. Second, the walking energy was measured on the spatial graph. Third, ERAM model was used to apply weights with spatial connection properties in random walking environment, and the walking energy weights were applied to the ERAM model to calculate the walk energy weighted ERAM values and visualize the distribution of pedestrian flow. To verify the validation of the established model, existing and proposed spatial analysis models were compared to real space. The results of this study are as follows : The model proposed in this study showed as much elaborated estimation of pedestrian traffic flow in real space as in traditional spatial analysis models, and also it showed much higher level of forecasting pedestrian traffic flow in real space than existing models.

Synthesis, Structures and Properties of Three Metal-organic Frameworks Based on 3-(4-((1H-imidazol-1-yl)methyl)phenyl)acrylic Acid

  • Liang, Peng;Ren, Tian-Tian;Tian, Wei-Man;Xu, Wen-Jia;Pan, Gang-Hong;Yin, Xian-Hong
    • Bulletin of the Korean Chemical Society
    • /
    • v.35 no.1
    • /
    • pp.182-188
    • /
    • 2014
  • Three new transition metal complexes based on Ozagrel $[Cu(Ozagrel)]_n$ (1), $[Zn(Ozagrel)(Cl)]_n$ (2), ${[Mn_2-(Ozagrel)(1,4-ndc)_2]{\cdot}(H_2O)}_n$ (3), (Ozagrel = 3-(4-((1H-imidazol-1-yl)methyl)phenyl)acrylic acid; 1,4-ndc = 1,4-Naphthalenedicarboxylic acid) have been hydrothermally synthesized and characterized by elemental analyse, IR, TG, PXRD, electrochemical analysis and single crystal X-ray diffraction. X-ray structure analysis reveals that 1 and 3 are 3D coordination polymers, while complex 2 is a two-dimensional network polymer, the 2D layers are further packed into 3D supramolecular architectures that are connected through hydrogen bonds. The electrochemistry of 1-3 was studied by cyclic voltammetry in methanol and water using a glassy carbon working electrode. Also, thermal decomposition process and powder X-ray diffraction of complexes were investigated.

pH-Controlled Synthesis of Carbon Xerogels for Coin-Type Organic Supercapacitor Electrodes (pH를 조절하여 제조한 카본제어로젤을 이용한 코인타입 유기계 슈퍼커패시터 전극)

  • Ji Chul Jung;Wonjong Jung
    • Korean Journal of Materials Research
    • /
    • v.33 no.10
    • /
    • pp.430-438
    • /
    • 2023
  • In this study, we synthesized pH-controlled resorcinol-formaldehyde (RF) gels through the polymerization of two starting materials: resorcinol and formaldehyde. The prepared RF gels were dried using an acetone substitution method, and they were subsequently carbonized under nitrogen atmosphere to obtain carbon xerogels (CX_Y) prepared at different pH (Y). The carbon xerogels were utilized as active materials for coin-type organic supercapacitor electrodes to investigate the influence of pH on the electrochemical properties of the carbon xerogels. The carbon xerogels prepared at lower pH (CX_9.5 and CX_10) exhibited sufficient particle growth, with a three-dimensional network of particles during the RF gel formation, resulting in the development of abundant mesopores. Conversely, the carbon xerogels prepared at higher pH (CX_11 and CX_12) retained densely packed structures of small particles, leading to pore collapse and low specific surface areas. Consequently, CX_9.5 and CX_10 showed high specific surface areas, and provided ample adsorption sites for the formation of electric double layers with electrolyte ions. Moreover, the three-dimensional particle network in CX_9.5 and CX_10 significantly enhanced electrical conductivity. The presence of well-developed mesopores in these materials further facilitated the effective transport of electrolyte ions, contributing to their superior performance as organic supercapacitor electrodes. This study confirmed that pH-controlled carbon xerogels are one of the promising active materials for organic supercapacitor electrodes. Furthermore, we concluded that pH during RF gel formation is a crucial factor determining the electrode performance of the carbon xerogels, highlighting the need for precise pH control to obtain high-performance carbon xerogel electrodes.

A Parasitic Elements Extraction of MIM Capacitor Using Short-Open Calibration Method (단락 개방 Calibration 방법을 이용한 MIM 커패시터의 기생 소자 값 추출)

  • Kim, Yu-Seon;Nam, Hun;Lim, Yeong-Seog
    • Journal of the Institute of Electronics Engineers of Korea TC
    • /
    • v.45 no.8
    • /
    • pp.114-120
    • /
    • 2008
  • In this paper, we extract the parasitic elements of the metal-insulate-metal(MIM) capacitor using short-open calibration (SOC). The scattering matrixes of short, open, and MIM structures in strip lines are measured by full electro-magnetic (EM) simulator and vector network analyser. The full EM simulations are performed by finite element method (FEM) that was fitted three dimensional structure analysis. The electro-magnetic effects of MIM capacitor laminated in the multi-layered structures are proposed the II equivalent circuit with lumped elements, and the relations between the measured scattering parameters of the MIM structures and lumped elements in the circuits are shown by performing 2 port network analysis. The extracted lumped elements using the proposed SOC method are independent to frequencies.

Microwave-assisted Preparation, Structures, and Photoluminescent Properties of [Ln(NO3)2(H2O)3(L)2](NO3)(H2O) {Ln=Tb, Eu;L=2-(4-pyridylium)ethanesulfonate, (4-pyH)+-CH2CH2-SO3-}

  • Zheng, Zhen Nu;Lee, Soon-W.
    • Bulletin of the Korean Chemical Society
    • /
    • v.32 no.6
    • /
    • pp.1859-1864
    • /
    • 2011
  • Two lanthanide complexes, $[Ln(NO_3)_2(H_2O)_3(L)_2](NO_3)(H_2O)$ {Ln = Eu (1), Tb (2); L = 2-(4-pyridylium)-ethanesulfonate, $(4-pyH)^+-CH_2CH_2-SO_3^-)$}, were prepared from lanthanide nitrate and 4-pyridineethanesulfonic acid in $H_2O$ under microwave-heating conditions. Complexes 1 and 2 are isostructural, and the lanthanide metal in both complexes is coordinated to nine oxygen atoms. The pyridyl nitrogen in the ligand is protonated to give a zwitter ion that possesses an $NH^+$ (pyridyl) positive end and an $SO_3^-$ negative end. All O-H and N-H hydrogen atoms participate in hydrogen bonds to generate a two-dimensional (complex 1) or a three-dimensional network (complex 2). Complex 1 exhibits an intense red emission, whereas complex 2 exhibits an intense green emission in the solid state at room temperature.

Machine Learning of GCM Atmospheric Variables for Spatial Downscaling of Precipitation Data

  • Sunmin Kim;Masaharu Shibata;YasutoTachikawa
    • Proceedings of the Korea Water Resources Association Conference
    • /
    • 2023.05a
    • /
    • pp.26-26
    • /
    • 2023
  • General circulation models (GCMs) are widely used in hydrological prediction, however their coarse grids make them unsuitable for regional analysis, therefore a downscaling method is required to utilize them in hydrological assessment. As one of the downscaling methods, convolutional neural network (CNN)-based downscaling has been proposed in recent years. The aim of this study is to generate the process of dynamic downscaling using CNNs by applying GCM output as input and RCM output as label data output. Prediction accuracy is compared between different input datasets, and model structures. Several input datasets with key atmospheric variables such as precipitation, temperature, and humidity were tested with two different formats; one is two-dimensional data and the other one is three-dimensional data. And in the model structure, the hyperparameters were tested to check the effect on model accuracy. The results of the experiments on the input dataset showed that the accuracy was higher for the input dataset without precipitation than with precipitation. The results of the experiments on the model structure showed that substantially increasing the number of convolutions resulted in higher accuracy, however increasing the size of the receptive field did not necessarily lead to higher accuracy. Though further investigation is required for the application, this paper can contribute to the development of efficient downscaling method with CNNs.

  • PDF

Structures and Electro-optical Properties of Liquid Crystal-Polymer Composite Films (액정-고분자 복합막의 구조와 전기광학특성)

  • 남수용
    • Journal of the Korean Graphic Arts Communication Society
    • /
    • v.13 no.2
    • /
    • pp.19-32
    • /
    • 1995
  • Liquid crystal-polymer composite(LCPC) films are promising new materials for both projection displays and vision products. LCPC films consist of a continuous liquid crystal phase embedded in a three- dimensional network of polymer matrix. The liquid crystal in these LC phases can be electrically switched giving rise to an opaque scattering off-state and a transparent, non- scattering on-state. In this work, a premixture is composed of LC, UV-curable monomer and photonitiator. LCPC films are formed by photopolymerization induced phase separation from this premixture. In conclusion, structure and electro-optical properties of LCPC films strongly depends on the selection of monomer, LC content and curing rate.

  • PDF