• Journal of the Korean Society of Fisheries and Ocean Technology
• /
• v.53 no.4
• /
• pp.386-395
• /
• 2017

For scientific research, a number of acoustic surveys using commercial echosounders equipped in fishing vessels were conducted throughout the world; however, few studies were performed in South Korea. Hence, this research is an preliminary study for presenting the application of a sounder from a fishing vessel. The fishing operations using a pair trawler (7 Cheonghae) was conducted in the Northwest-Western sea of Jeju Island from 20 to 23 April, 2016. Substantial impulse noises and attenuated signals were eliminated by the latest algorithms. Acoustic signals were grouped into the fish aggregations and long layer-like signals. The fish aggregations appeared between 30 and 60 m, and long layer-like signals showed the diurnal vertical migration. Energetic, morphological and positional properties of the fish aggregations and layer-like signals were described. The fish aggregations appeared mainly between sunrise and sunset; however layer-like signals tended to be presented regardless of time in consideration of the time series analysis. On the basis of the consignment sales, Scomberomorus niphonius, the target species of F/V 7 Cheonghae, was the highest catch with 4,280 kg (74.6%) and might have appeared in fish aggregations and layer forms.

• Ecology and Resilient Infrastructure
• /
• v.6 no.2
• /
• pp.101-108
• /
• 2019

This study investigated the impact of abandoned channel restoration on fish habitat using the physical habitat simulation. The study area is a 1.2 km long reach of the Cheongmi-cheon stream. In the study area, the restoration of the abandoned channel was carried out from July 2012 to December 2105. Physical habitat simulations were carried out for both cases before and after the restoration. The River2D model and habitat suitability curve were used for hydraulic and habitat simulations, respectively. Zacco platypus, which is a dominant fish species in the study area, was selected as target fish for the physical habitat simulation. Hydraulic simulations were carried out before and after restoration for various discharges. Then, composite suitability index and weighted usable area were calculated before and after restoration and changes in the physical habitat of Zacco platypus were discussed. Simulation results indicated that the abandoned channel restoration is effective in creating fish habitat and mitigating the degradation of fish habitat from the high flow condition.

• Proceedings of the National Institute of Ecology of the Republic of Korea
• /
• v.3 no.1
• /
• pp.54-65
• /
• 2022

Species distribution models are a useful tool for predicting future distribution and establishing a preemptive response of invasive species. However, few studies considered the possibility of habitat for the aquatic organism and the number of target sites was relatively small compared to the area. Environmental DNA (eDNA) is the emerging tool as the methodology obtaining the bulk of species presence data with high detectability. Thus, this study applied eDNA survey results of Micropterus salmoides and Lepomis macrochirus to species distribution modeling by seasons in the Anyang stream network. Maximum Entropy (MaxEnt) model evaluated that both species extended potential distribution area in October compared to July from 89.1% (12,110,675 m²) to 99.3% (13,625,525 m²) for M. salmoides and 76.6% (10,407,350 m²) to 100% (13,724,225 m²) for L. macrochirus. The prediction value by streams was varied according to species and seasons. Also, models elucidate the significant environmental variables which affect the distribution by seasons and species. Our results identified the potential of eDNA methodology as a way to retrieve species data effectively and use data for building a model.

• Journal of Wetlands Research
• /
• v.10 no.1
• /
• pp.39-47
• /
• 2008

An eco-washland is increasingly getting attentions as a new alternative plan for management of water resources because of role as flooding control and ecological park without social and ecological side effects. However, there is a lack of study regarding technological development and ecological guidelines to create eco-washland. This study was carried out to suggest ecological guidelines necessary for engineering process to create eco-washland. A study site was the lower reach of Seokjang stream connecting to Yimjin river, a candidate of new eco-washland, and Kumsa area in Namhan river was selected as a reference site. The analysis of ecological characteristics focused on vegetation, fishes, and birds. Major vegetation communities, composed of dominant species such as Salix koreensis, Salix gracylistyla, Miscanthus sacchariflorus, Phragmites communis, etc., formed physical conditions along with other land uses including open water, sandbar, cultivated land, etc. Dominant species of fishes were some species belonging to Cyprinidae and Acheilognathinae, and in case of birds Anser albifrons, Anas platyrhychos, Anas poecilorhyncha belonging to waterbirds and Paradoxornis webbinanus dependent to forest edge were dominantly distributed. The results showed that complex wetland types associated with partially deep water and upland was the optimal eco-hydrological condition of washland. Cyprinidae and Acheilognathinae in case of fish and Egretta spp. (spring season) and Anas spp. (winter season) in case of bird were selected as target species for the these wetland types. Finally, a detail planning criteria to create habitats of these target species were discussed in terms of spawning, breeding, feeding, resting, refuge, nesting, etc.

• Journal of the Korean Society of Fisheries and Ocean Technology
• /
• v.60 no.1
• /
• pp.47-56
• /
• 2024

After the United Nations Convention on the Law of the Sea (UNCLOS) and the United Nations Fish Stocks Agreement (UNFSA) came into effect, international cooperation through Regional Fisheries Management Organizations (RFMOs) was required, and each RFMO established and adopted the Conservation and Management Measure (CMM) for the regional Observer Programs to collect data on fishing activities and biological information and to monitor compliance with its CMMs. The observer coverage required by RFMO is set differently for each organization, ranging from 5% to 100%. In addition, tuna-RFMOs recommend increasing observer coverage in longline fisheries by at least 20% for reliable quantitative analysis of not only target species but also bycatch species and ecologically related species such as sharks, seabirds, sea turtles, and marine mammals. Therefore, in this study, we discussed ways to improve the national observer programs of Korean distant water fisheries that should be addressed in the future to respond to the RFMO trends.

• Korean Journal of Environment and Ecology
• /
• v.30 no.3
• /
• pp.353-368
• /
• 2016

This study surveyed the diversity and distributional characteristics of benthic macroinvertebrates and freshwater fish during the period from April to October, 2015 in Seonun Mountain Provincial Park. As a result, a total of 78 species of benthic macroinvertebrates belonging to 50 families, 16 orders, and four phyla were observed in Seonun stream; additionally, 25 species of freshwater fish belonging to six families were identified in all the investigated sites. Among benthic macroinvertebrates, Ephemeroptera(13 spp.: 22.81%) was the largest group in terms of species richness. In the FFGs, gathering-collectors(30 spp.: 36.14%) were relatively larger as represented by Ephemeroptera that usually inhabit fast flowing streams. In the HOGs, clingers(23 spp.: 29.49%) and burrowers(17 spp.: 21.79%) were the dominant groups. For both EPT ratio and ESB index, site 8 appeared to be the highest with 44.44% and 72 marks respectively, while the sites 4 and 9 showed relatively lower rates and indices. According to the results of evaluation, site 8 needs to be designated as the highest protection area while the sites 4 and 9 may be designated as target areas for preferential improvement. According to the analysis of fish community, the dominant species was Zacco teminchkii(333 inds.: 36.80%), and the dominant index was the lowest(0.24) and diversity index was the highest(1.81) at site 8, which therefore represents a stable freshwater fish community. In this survey, six Korean endemic species were identified: Ephemera separigata, Neoperla coreensis, Rhodeus uyekii, Squalidus gracilis majimae, Microphysogobio yaluensis, and Iksookimia koreensis. Also, three species belonging to the management of exportable group(Davidius lunatus, E. separigara, N. coreenis) were observed. Two habitat specific species: Thraulus grandis and Anguilla marmorata, were found for the first time in Gochang area and marked on the Korean distribution map through discussion.

• Journal of Korea Water Resources Association
• /
• v.52 no.spc2
• /
• pp.823-833
• /
• 2019

This study presents the impact of natural flow patterns on downstream fish habitat and economic outcomes in the Dal Stream, Korea. The study reach is 3.35 km long, located downstream form the Goesan Dam. To assess such impact, this study performed physical habitat simulations. The River2D model was used for the computation of the flow and the HSI model for the habitat simulation. Two physical habitat variables, flow depth and velocity, were used. The Zacco platypus, Zacco temminckii, Coreoleuciscus splendidus, and Opsariichthys bidens were selected as the target species in the study area. Using the building block approach (BBA), the scenarios for the hydropeaking mitigation were presented. Scenario 1 and scenario 2 were proposed by using the magnitude - duration concept and averaged the hydrologic data over the each month, respectively. Simulation results indicated that the scenarios effects significantly increased by about 18.6% for the weighted usable area (WUA). In addition, hydroelectric power benefits with both scenarios were investigated. It was revealed that the change of storing and releasing water decreased by about 27% for hydroelectric power benefits. In order to increase economic benefits, the scenario was modified with the discharges corresponding to the hydropeaking condition except the flood season. As a result, the hydroelectric power benefits were almost the same, however the aquatic habitat for the target species increased by about 5%. The change of dam re-operations through natural flow patterns provides an opportunity to minimize environmental and economic benefits in order to balance water management.

• Korean Journal of Fisheries and Aquatic Sciences
• /
• v.44 no.1
• /
• pp.8-17
• /
• 2011

To identify and examine the distribution of proteolytic inhibitory activity in crude extracts from fish eggs, and to determine the applicability of these protease inhibitors as anti-degradation agents in surimi-based products and fish meat, we compared the inhibitory activities of various extracts from fish eggs to those of commercial proteases, such as trypsin and papain. We used the optimal conditions for the screening of trypsin activity: 30 ug/uL of 0.1% trypsin and 0.6 mM Na-benzoyl-L-arginine-p-nitroanilide (BAPNA) with a pH of 8.0 at $40^{\circ}C$ for 60 min. The activities of papain and four commercial proteases were investigated after mixing with 100 ug/uL enzymes and 0.3% casein with a pH of 8.0 at $40^{\circ}C$ for 60 min. We performed a screening assay to detect the inhibitory activity (%) of crude extracts from eight species of fish eggs against the target proteases trypsin and papain. The assay revealed a wide distribution of trypsin and papain inhibitors in fish eggs. The specific inhibitory activities (11.6.28.6 U/mg) of crude extracts from fish eggs against trypsin and BAPNA substrate were higher than that (0.64 U/mg) of egg whites, used as a commercial inhibitor. The inhibitory activities of crude extracts from fish eggs against trypsin, and of egg whites against casein substrate (1.94.4.51 U/mg), were higher than those of papain (0.24.1.57 U/mg) and commercial protease (0.04.0.32 U/mg). The extracts from fish eggs were rich in protease inhibitors that exhibited strong inhibitory activity against trypsin, a serine protease, and papain, a cysteine protease.

• Development and Reproduction
• /
• v.23 no.1
• /
• pp.35-42
• /
• 2019

Fish shows great difference in growth rate between individuals during larval development and early growth. This difference seriously reduces the production efficiency in fish culture. Growth hormone (GH)/Insulin-like growth factor 1 (IGF1) system is said to play some pivotal roles in fish growth. In this study, we investigated differences of GH, IGF1 and GHR gene expressions in juvenile red spotted grouper (Epinephelus akaara) with different growth performance. Red spotted groupers were reared under the same environmental condition (water temperature $24{\pm}1^{\circ}C$, natural light) for 96 days after hatching. They were divided into 3 groups by size (fast growing, middle growing and slow growing groups: FGG, MGG, and SGG, respectively). RNA was extracted from the brain, liver and muscle tissues from each group, and target gene expression was examined by real-time PCR. In the brain with pituitary gland, expression of GH gene in FGG was significantly higher than the expression in SGG, but the expression of IGF1 and GHR genes in the muscle was highest in SGG. Difference of GHR and IGF1 mRNA in the liver between groups with different growth performance was less clear than that in other tissues, although level of IGF1 mRNA was higher in SGG than in MGG. These results suggest that hormonal governing of growth is not the same in fast growing and slow growing fish, and size grading could cause a shift of hormonal state and growth pattern in this species.

• Journal of Microbiology and Biotechnology
• /
• v.28 no.11
• /
• pp.1823-1833
• /
• 2018

Fluorescence in-situ hybridization (FISH) is a common and popular method used to investigate microbial communities in natural and engineered environments. In this study, two specific 16S rRNA-targeted oligonucleotide probes, CLZ and KCLZ, were designed and verified to quantify the genus Clostridium and the species Clostridium kluyveri. The optimal concentration of hybridization buffer solution for both probes was 30% (w/v). The specificity of the designed probes was high due to the use of pellets from pure reference strains. Feasibility was tested using samples of Chinese liquor from the famed Luzhou manufacturing cellar. The effectiveness of detecting target cells appears to vary widely in different environments. In pit mud, the detection effectiveness of the target cell by probes CLZ and KCLZ was 49.11% and 32.14%, respectively. Quantitative analysis by FISH technique of microbes in pit mud and fermented grains showed consistency with the results detected by qPCR and PCR-DGGE techniques, which showed that the probes CLZ and KCLZ were suitable to analyze the biomass of Clostridium spp. and C. kluyveri during liquor fermentation. Therefore, this study provides a method for quantitative analysis of Clostridium spp. and C. kluyveri and monitoring their community dynamics in microecosystems.