• Title/Summary/Keyword: Tag for Tree

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Complete Genome of Bacillus subtilis subsp. subtilis KCTC 3135T and Variation in Cell Wall Genes of B. subtilis Strains

  • Ahn, Seonjoo;Jun, Sangmi;Ro, Hyun-Joo;Kim, Ju Han;Kim, Seil
    • Journal of Microbiology and Biotechnology
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    • v.28 no.10
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    • pp.1760-1768
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    • 2018
  • The type strain Bacillus subtilis subsp. subtilis KCTC $3135^T$ was deeply sequenced and annotated, replacing a previous draft genome in this study. The tar and tag genes were involved in synthesizing wall teichoic acids (WTAs), and these genes and their products were previously regarded as the distinguishing difference between B. s. subtilis and B. s. spizizenii. However, a comparative genomic analysis of B. subtilis spp. revealed that both B. s. subtilis and B. s. spizizenii had various types of cell walls. These tar and tag operons were mutually exclusive and the tar genes from B. s. spizizenii were very similar to the genes from non-Bacillus bacteria, unlike the tag genes from B. s. subtilis. The results and previous studies suggest that the tar genes and the tag genes are not inherited after subspecies speciation. The phylogenetic tree based on whole genome sequences showed that each subspecies clearly formed a monophyletic group, while the tree based on tar genes showed that monophyletic groups were formed according to the cell wall type rather than the subspecies. These findings indicate that the tar genes and the presence of ribitol as a cell-wall constituent were not the distinguishing difference between the subspecies of B. subtilis and that the description of subspecies B. s. spizizenii should be updated.

A Variable-Slotted Tree Based Anti-Collision Algorithm Using Bit Change Sensing in RFID Systems (RFID 시스템에서 비트 변화 감지를 이용한 가변 슬롯 트리 기반 충돌 방지 알고리즘)

  • Kim, Won-Tae;Ahn, Kwang-Seon;Lee, Seong-Joon
    • The KIPS Transactions:PartA
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    • v.16A no.4
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    • pp.289-298
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    • 2009
  • Generally, RFID systems are composed of one reader and several passive tags, and share the single wireless channel. For this reason, collisions occurwhen more than two tags simultaneously respond to the reader's inquiry. To achieve this problem, many papers, such as QT[8], HCT[10], BSCTTA[2], and QT-BCS[9], have been proposed. In this paper, we propose the tree-based anti-collision algorithm using a bit change sensing unit (TABCS) based on BSCTTA algorithm. The proposed algorithm can identify bits returned from tags through bit change sensing unit, even if multi collisions occur. So, it rapidly generates the unique prefix to indentify each tag, and reduce the total of bits. As the result, the cost of identifying all tag IDs is relatively reduced as compared with existing algorithms. It is verified through simulations that the proposed algorithm surpass other existing algorithms.

Indexing Scheme based on the Cache & Main Memory for RFID tag Tracing (CSTmr-tree) (RFID 태그 추적을 위한 캐시 & 메인 메모리 기반의 색인 기법(CSTmr-tree))

  • Hong, Jin-Suk;Youn, Sung-Dae
    • Proceedings of the Korea Information Processing Society Conference
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    • 2007.05a
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    • pp.24-27
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    • 2007
  • 주기억 색인 기법인 Tmr-트리가 R-트리에 비해서 삽입시간이 오래 걸린다는 단점이 있다. 본 논문은 L2 캐시를 최대한 활용하여 기존 Tmr-트리의 장점을 가지는 새로운 CSTmr-트리(Cache Sensitive Tmr-트리)구조를 제안하고, 이 구조에 삽입, 삭제 등의 알고리즘을 제안하였다. 제안한 구조와 알고리즘을 다른 인덱스 구조와 비교하여 CSTmr-트리의 우수성을 보인다.

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Performance Evaluation of Anti-collision Algorithms in the Low-cost RFID System (저비용 RFID 시스템에서의 충돌방지 알고리즘에 대한 성능평가)

  • Quan Cheng-hao;Hong Won-kee;Lee Yong-doo;Kim Hie-cheol
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.30 no.1B
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    • pp.17-26
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    • 2005
  • RFID(Radio Frequency IDentification) is a technology that automatically identifies objects attached with electronic tags by using radio wave. For the implementation of an RFID system, an anti-collision algorithm is required to identify several tags within the RFID reader's range. Few researches report the performance trade-off among anti-collision algorithms in terms of the communications traffic between the reader and tags, the identification speed, and so on. In this paper, we analyze both tree based memoryless algorithms and slot aloha based algorithms that comprise of almost every class of existing anti-collision algorithms. To compare the performance, we evaluated each class of anti-collision algorithms with respect to low-cost RFID system with 96-bit EPC(Electronic Product Code). The results show that the collision tracking tree algorithm outperforms current tree based and aloha based algorithms by at least 2 times to 50 times.

A Hybrid Anti-Collision Protocol using Bit Change Sensing Unit in RFID System (RFID 시스템에서 비트변화감지를 이용한 하이브리드 충돌 방지 프로토콜)

  • Kim, Jeong-Hwan;Kim, Young-Tae;Park, Yong-Soo;Ahn, Kwang-Seon
    • Journal of Internet Computing and Services
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    • v.10 no.2
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    • pp.133-141
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    • 2009
  • A tag collision problem occurs when many tags are placed in a interrogation zone in RFID system. A tag collision problem is one of core issues and various protocols have been proposed to solve the collision problems. Generally tree-based protocols generate unique prefixes and identify tags with them as quick as possible. In this paper, we propose the QT-BCS protocol which decreases the identification time by reducing the number of query-response. The QT-BCS protocol makes a prefixes using time slot and bit change sensing unit. This protocol compares the current bit of tags until the current bit is differ from the previous one. When this occurs, all of the bits scanned so far are transferred to slot-0 and slot-1 depending on the first bit value in Reader. Consequently, this method can reduce the number of queries by tracing prefixes easily. Simulation result shows QT-BCS is more efficient in identifying tags than Query Tree and 4-ary Query Tree protocol.

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An Index Structure for Efficient X-Path Processing on S-XML Data (S-XML 데이터의 효율적인 X-Path 처리를 위한 색인 구조)

  • Zhang, Gi;Jang, Yong-Il;Park, Soon-Young;Oh, Young-Hwan;Bae, Hae-Young
    • Proceedings of the Korea Information Processing Society Conference
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    • 2005.05a
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    • pp.51-54
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    • 2005
  • This paper proposes an index structure which is used to process X-Path on S-XML data. There are many previous index structures based on tree structure for X-Path processing. Because of general tree index's top-down query fashion, the unnecessary node traversal makes heavy access and decreases the query processing performance. And both of the two query types for X-Path called single-path query and branching query need to be supported in proposed index structure. This method uses a combination of path summary and the node indexing. First, it manages hashing on hierarchy elements which are presented in tag in S-XML. Second, array blocks named path summary array is created in each node of hashing to store the path information. The X-Path processing finds the tag element using hashing and checks array blocks in each node to determine the path of query's result. Based on this structure, it supports both single-path query and branching path query and improves the X-Path processing performance.

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A Stack Bit-by-Bit Algorithm for RFID Multi-Tag Identification (RFID 다중 태그 인식을 위한 스택 Bit-By-Bit 알고리즘)

  • Lee, Jae-Ku;Yoo, Dae-Suk;Choi, Seung-Sik
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.32 no.8A
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    • pp.847-857
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    • 2007
  • For the implementation of a RFID system, an anti-collision algorithm is required to identify multiple tags within the range of a RFID Reader. A Bit-by-Bit algorithm is defined by Auto ID Class 0. In this paper, we propose a SBBB(Stack Bit-by-Bit) algorithm. The SBBB algorithm save the collision position and makes a query using the saved data. SBBB improve the efficiency of collision resolution. We show the performance of the SBBB algorithm by simulation. The performance of the proposed algorithm is higher than that of BBB algorithm. Especially, the more each tag bit streams are the duplicate, the higher performance is.

Adaptive RFID anti-collision scheme using collision information and m-bit identification (충돌 정보와 m-bit인식을 이용한 적응형 RFID 충돌 방지 기법)

  • Lee, Je-Yul;Shin, Jongmin;Yang, Dongmin
    • Journal of Internet Computing and Services
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    • v.14 no.5
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    • pp.1-10
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    • 2013
  • RFID(Radio Frequency Identification) system is non-contact identification technology. A basic RFID system consists of a reader, and a set of tags. RFID tags can be divided into active and passive tags. Active tags with power source allows their own operation execution and passive tags are small and low-cost. So passive tags are more suitable for distribution industry than active tags. A reader processes the information receiving from tags. RFID system achieves a fast identification of multiple tags using radio frequency. RFID systems has been applied into a variety of fields such as distribution, logistics, transportation, inventory management, access control, finance and etc. To encourage the introduction of RFID systems, several problems (price, size, power consumption, security) should be resolved. In this paper, we proposed an algorithm to significantly alleviate the collision problem caused by simultaneous responses of multiple tags. In the RFID systems, in anti-collision schemes, there are three methods: probabilistic, deterministic, and hybrid. In this paper, we introduce ALOHA-based protocol as a probabilistic method, and Tree-based protocol as a deterministic one. In Aloha-based protocols, time is divided into multiple slots. Tags randomly select their own IDs and transmit it. But Aloha-based protocol cannot guarantee that all tags are identified because they are probabilistic methods. In contrast, Tree-based protocols guarantee that a reader identifies all tags within the transmission range of the reader. In Tree-based protocols, a reader sends a query, and tags respond it with their own IDs. When a reader sends a query and two or more tags respond, a collision occurs. Then the reader makes and sends a new query. Frequent collisions make the identification performance degrade. Therefore, to identify tags quickly, it is necessary to reduce collisions efficiently. Each RFID tag has an ID of 96bit EPC(Electronic Product Code). The tags in a company or manufacturer have similar tag IDs with the same prefix. Unnecessary collisions occur while identifying multiple tags using Query Tree protocol. It results in growth of query-responses and idle time, which the identification time significantly increases. To solve this problem, Collision Tree protocol and M-ary Query Tree protocol have been proposed. However, in Collision Tree protocol and Query Tree protocol, only one bit is identified during one query-response. And, when similar tag IDs exist, M-ary Query Tree Protocol generates unnecessary query-responses. In this paper, we propose Adaptive M-ary Query Tree protocol that improves the identification performance using m-bit recognition, collision information of tag IDs, and prediction technique. We compare our proposed scheme with other Tree-based protocols under the same conditions. We show that our proposed scheme outperforms others in terms of identification time and identification efficiency.

Adaptive Conversion of Web Content for Mobile Terminals (이동단말을 위한 적응적 웹 문서 변환)

  • Kang, Sueng-Chun;Chung, Kwang-Sue
    • Journal of KIISE:Computing Practices and Letters
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    • v.6 no.6
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    • pp.635-642
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    • 2000
  • In this paper, we proposed an efficient document conversion mechanism to provide a adaptive web document to mobile terminals. We also proposed a RHTML(Reduced HTML) to archive the adaptive tag reduction. Markup error correction process in the proposed adaptive document conversion mechanism converts a HTML(HyperText Markup Language) document into a XML(Extensible Markup Language) application document. This. process makes web document easy to handle with a DOM (Document Object Mode)) as the tree model and removes the hardware overhead in mobile terminals. Also, tag reduction process provides the adaptive web document with three DTD(Document Type Definition)s in the RHTML.

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A RFID Tag Anti-Collision Algorithm Using 4-Bit Pattern Slot Allocation Method (4비트 패턴에 따른 슬롯 할당 기법을 이용한 RFID 태그 충돌 방지 알고리즘)

  • Kim, Young Back;Kim, Sung Soo;Chung, Kyung Ho;Ahn, Kwang Seon
    • Journal of Internet Computing and Services
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    • v.14 no.4
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    • pp.25-33
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    • 2013
  • The procedure of the arbitration which is the tag collision is essential because the multiple tags response simultaneously in the same frequency to the request of the Reader. This procedure is known as Anti-collision and it is a key technology in the RFID system. In this paper, we propose the 4-Bit Pattern Slot Allocation(4-BPSA) algorithm for the high-speed identification of the multiple tags. The proposed algorithm is based on the tree algorithm using the time slot and identify the tag quickly and efficiently through accurate prediction using the a slot as a 4-bit pattern according to the slot allocation scheme. Through mathematical performance analysis, We proved that the 4-BPSA is an O(n) algorithm by analyzing the worst-case time complexity and the performance of the 4-BPSA is improved compared to existing algorithms. In addition, we verified that the 4-BPSA is performed the average 0.7 times the query per the Tag through MATLAB simulation experiments with performance evaluation of the algorithm and the 4-BPSA ensure stable performance regardless of the number of the tags.