• Title/Summary/Keyword: Str

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Genealogical Stratification by Genetic Distance and DNA Haplotrees (DNA 해프로트리와 유전적거리에 의한 가계족보의 계층화)

  • Ryu, Kwang Ryol
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.24 no.1
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    • pp.65-70
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    • 2020
  • This paper describes hierarchically stratifying and analyzing haplotrees of haplogroups from haplotypes on the Y and X chromosomes of human cells for genetic and Korean traditional and genealogical trees. The specific region is Chungcheong province, and the Y-DNA of the paternal lines has high frequency of O3a∗ and O2b∗ in the O group, and the mtDNA of the maternal line has a relatively high frequency of D∗ and M∗ in the L3 group. Each combination of these constructs the family tree of the father lines and mother lines. Genetic distances using Nei's standard genetic distance, are very close relatives of less than 0.1 and close relatives of 0.1 to 0.8. Provided, the distance is more than 1.0, it is difficult to estimate relatives. STR has the identified kinship, and SNP has the personal genetic identification. A scientific stratification of the Korean genealogical tree is created by the three factors.

Surgical Outcomes of Sphenoid Wing Meningioma with Periorbital Invasion

  • Park, Ga-On;Park, Hyun Ho;Yoo, Jihwan;Hong, Chang-Ki;Oh, Jiwoong
    • Journal of Korean Neurosurgical Society
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    • v.65 no.3
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    • pp.449-456
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    • 2022
  • Objective : The aim of this study was to evaluate the clinical outcome of sphenoid wing meningioma with periorbital invasion (PI) after operation. Methods : Sixty one patients with sphenoid wing meningioma were enrolled in this study. Their clinical conditions were monitored after the operation and followed up more than 5 years at the outpatient clinic of a single institution. Clinical and radiologic information of the patients were all recorded including the following parameters : presence of PI, presence of peri-tumor structure invasion, pathologic grade, extents of resection, presence of hyperostosis, exophthalmos index (EI), and surgical complications. We compared the above clinical parameters of the patients with sphenoid wing meningioma in the presence or absence of PI (non-PI), then linked the analyzed data with the clinical outcome of the patients. Results : Of 61 cases, there were 14 PI and 47 non-PI patients. PI group showed a significantly higher score of EI (1.37±0.24 vs. 1.00±0.01, p<0.001), more frequent presence of hyperostosis (85.7% vs. 14.3%, p<0.001), and lower rate of gross total resection (GTR) (35.7% vs. 68.1%, p=0.032). The lower score of pre-operative EI, the absence of both PI and hyperostosis, smaller tumor size, and the performance of GTR were associated with lower recurrence rates in the univariate analysis. However, in the multivariate analysis, the performance of GTR was the only significant factor to determine the recurrence rate (p=0.043). The incidences of surgical complications were not statistically different between the subtotal resection (STR) and GTR groups, but it was strongly associated tumor size (p=0.017). Conclusion : The GTR group showed lower recurrence rate than the STR group without differences in the surgical complications. Therefore, the GTR is strongly recommended to treat sphenoid wing meningioma with PI for the better clinical outcome.

Development of targeted amplicon next-generation sequencing panel of 50 SNPs related to externally visible characteristics and behavior (외형 및 행동 습관 관련 50개 SNP 마커 분석을 위한 targeted amplicon next-generation sequencing 패널 개발)

  • Hee-Yeon Park;Yoonji Noh;Eung-Soo Kim;Hyun-Chul Park
    • Analytical Science and Technology
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    • v.37 no.3
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    • pp.189-199
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    • 2024
  • In forensic genetics, when it is not possible to confirm an individual's identity through STR profile analysis, additional information about the individual can be obtained using DNA-based phenotypic traits estimation. Recently, various researches have been conducted on methods to determine externally visible characteristics (EVC) such as eyes, hair, and skin color. However, relying solely on such phenotypic traits information has limitations for application in East Asian regions, including Korea. In this study, in order to utilize EVC related to an individual's appearance as investigative information, SNPs related to eye shape, hair thickness, skin color, as well as baldness, body type, high myopia, facial shape, acne, and behavioral habits were explored. A total of 50 SNPs were selected, and a targeted amplicon NGS panel capable of amplifying them all at once was developed. Experimental results confirmed the allelic types and frequencies of the 50 SNPs in 14 samples. We plan to use this panel to investigate the correlation between genotype and phenotype using various samples, and to develop methods for interpreting the results.

Estimation of Genetic Parameter for Linear Type Traits in Holstein Dairy Cattle in Korea (Holstein종 젖소의 선형심사형질에 대한 유전모수추정)

  • Lee, Ki-Hwan;Sang, Byung-Chan;Nam, Myoung-Soo;Do, Chang-Hee;Choi, Jae-Gwan;Cho, Kawng-Hyun
    • Journal of Animal Science and Technology
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    • v.51 no.5
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    • pp.345-352
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    • 2009
  • This study utilized 332,625 records of linear type scores consisting for 15 primary traits, 22,175 final score and 84,612 pedigree information of 22,175 Holstein cows from 1993 to 2007 in Korea to estimate genetic parameters for 16 type traits. Genetic and error (co)variances between two traits selected from 16 traits were estimated using bi-trait pairwise analyses with DFREML package. The estimated heritabilities for stature (ST), strength (STR), body depth (BD), dairy form (DF), rump angle (RA), thurl width (TW), rear legs side view (RLSV), foot angle (FA), fore udder attachment (FUA), rear udder height (RUH), rear udder width (RUW), udder cleft (UC), udder depth (UD), front teat placement (FTP), front teat length (FTL) and final score (FS) were 0.31, 0.21, 0.25, 0.10, 0.29, 0.19, 0.09, 0.06, 0.12, 0.13, 0.12, 0.08, 0.26, 0.20, 0.28 and 0.15, respectively. ST had the highest positive genetic correlation with BD (0.90), while RLSV had the highest negative genetic correlation with FA (-0.56). RA had negative genetic correlation with most udder traits (-0.17~-0.02). Especially, RUW had the higher positive genetic correlation with STR (0.60), BD (0.62), and TW (0.49), however, UD had the higher negative genetic correlation with STR (-0.40) and BD (-0.40). FTL had negative genetic correlation with FUA, RUH, RUW, UC and UD. FS had positive genetic correlation with UC, UD and FTP (0.12, 0.18 and 0.20). However, additional research is needed on the use of these parameters in the genetic evaluation because estimated genetic and error variance-covariance matrices were not positive definite.

A STUDY ON TEMPERATURE VARIATION OF THE UPPER THERMOSPHERE IN THE HIGH LATITUDE THROUGH THE ANALYSIS OF 6300 $\AA$ AIRGLOW DATA (6300 $\AA$ 대기광 자료 분석을 통한 고위도 열권 상부에서의 온도 변화)

  • 정종균;김용하;원영인;이방용
    • Journal of Astronomy and Space Sciences
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    • v.14 no.1
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    • pp.94-108
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    • 1997
  • The temperature of the upper thermosphere is generally varied with the solar activity, and largely with geomagnetic activity in the high latitude. The data analyzed in this study are acquired at two ground stations, Thule Air Base($76,5{deg} N, 68.4{deg} W, A = 86{deg}$) and $S{psi}ndre Str{psi}mfjord (67.0{deg} N, 50.9{deg} W, A = 74{deg}$), Greenland. Both stations are located in the high latitude not only geographically but also geomagnetically. The terrestrial night glow at 6300 ${angs}$ from atomic oxygen has been observed from the two ground-based Fabry-Perot interferometers, during periods of 1986~1991 in Thule Air Base and 1986~1994 in $S{psi}ndre Str{psi}mfjord$. Some features noted in this study are as follows: (1) The correlation between the solar activity and the measured thermospheric temperature is highest in the case of $3{leq}Kp{leq}4$ in Thule, and increases with the geomagnetic activity in $S{psi}ndre Str{psi}mfjord$. (2) The measured temperatures at Thule is generally higher than those at $S{psi}ndre Str{psi}mfjord$, but the latter shows steeper slope with the solar activity. (3) The harmonic analysis shows that the diurnal variation(24hrs) is the main feature of the daily temperature variation with a temperature peak at about 13-14 LT (LT=UT-4). However, the semi-diurnal variation is evident during the period of weak solar activity. (4) Generally the predicted temperatures from both MSIS86 and VSH models are lower than the measured temperature, and this discrepancy grows as the solar activity increases. Therefore, we urge modelers to develope a new thermospheric model utilizing broader sets of measurements, especially for high solar activity.

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A Study on the Explanation of Activated Sludge Treatment Hindrance and its Control (활성오니처리 장해의 규명과 그 제어에 관한 연구)

  • 최택열
    • Journal of Environmental Health Sciences
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    • v.20 no.2
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    • pp.28-38
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    • 1994
  • New problems have been recently posed on the abnormal foaming (Scum) in an aeration tank and the sludge flotation in a final sedimentation tank during the activated sludge process. However, the activities of the causing bacteria, Nocardia-amarae in an aeration tank have not been searched out at all. Therefore, in this article the activities of Nocardia-amarae in an aeration tank have been closely examined by means of the changes of (F/M) ratio, SRT and inflowing substrate using continuous type and fed-batch type. Summarized results of experiments are as follows. 1. Regrading continuous culture when synthetic wastewater was used substrate neither the increase in the number of Nocardia-amarae in the aeration tank nor the Occurrence of Scum was observed. 2. In the case of fed-batch culture, Nocardia-amarae in the aeration tank increased due to the partial change in substrate and the effect of SRT was significant. 3. Once the scum was formed and the quantity of added Nocardia-amarae and substrate were not changed, the effect of STR was not significant.

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A Sturdy on the Stack Sleep Twist Round Wind Power System Using Magnetic Levitation Technology (대형 건물 구조에 적합한 자기 부상을 이용한 저 풍속 적층 연곡형 풍력발전 시스템에 관한 연구)

  • Jung, JaChoon;Jang, MiHye
    • 한국신재생에너지학회:학술대회논문집
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    • 2010.06a
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    • pp.186.3-186.3
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    • 2010
  • 본 논문은 우리나라와 같이 평균풍속이 낮고 바람 방향이 수시로 변하는 지역에 적합한 풍력발전 시스템에 관하여 논한다. 특히, 풍향에 상관없이 효율을 보장하고, 아주 약한 풍속 조건에서도 기동(Cut-in)되며, 낮은 평균풍속 5~6m/s인 지역에서도 경제적으로 풍력발전 단지의 구축이 가능하며, 다양한 지역에 설치가 가능하고, 소음이 적고 친(親) 환경적이며, 양산이 가능해 납기를 예측할 수 있으며 그리고 모든 부품 및 시스템의 국산화가 가능해야 한다는 7가지 조건을 만족하는 풍력발전시스템으로 이를 실현시키기 위하여 현재 풍력발전시스템의 가장 앞선 요소기술(state-of-the-art technology)인 직접구동 방식, 적층식, STR 블레이드, AFPM동기발전기, 자기부상 및 전자브레이크 등 5가지 기술을 복합 융합하여 최고의 효율 및 성능을 보장해 주는 적층 연곡형 시스템이다.

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Standardization of Terminology Relating to Biotechnology and Bioindustry

  • Chang, Yong-Keun;Kim, Jin-Hyun;Chae, Hee-Jeong;Park, Hyun-Gyu;Na, Jeong-Geol
    • 한국생물공학회:학술대회논문집
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    • 2003.10a
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    • pp.79-83
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    • 2003
  • Standard terms on biotechnology, bioprodutcs and related services are essential for clear and consistent communications and information exchange among peoples working in the area of biotechnology and bioindustry. The standardization of biotechnology terms are prerequisite to any other standardization efforts in the area. The major objective of this project is to develop a comprehensive and advanced terminology platform for the legislation of KS codes for the domestic bioindustry by data mining from various sources.

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Performance Analysis of8-VSB Receiver against Multipath Signal (다중경로 신호에 대한8-VSB 수신기의 성능 분석)

  • 이종주;임현우;김대진;이동두
    • Proceedings of the Korean Society of Broadcast Engineers Conference
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    • 1999.11b
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    • pp.239-242
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    • 1999
  • 본 논문에서는 8VSB수신기가 다중경로신호에 따른 성능이 나쁜 것에 대한 원인 분석과 나아가 개선책을 제시하기 위해 다중경로 신호가 디지털 지상파 TV의 수신성능에 미치는 영향에 대해 수신단의 STR(Symbol Timing Recovery)과 등화기를 중심으로 분석한다. 첫째 등화기의 성능 분석을 위해 에코의지연시간이 7.5 $\mu$sec일 때 시불변 환경에서 전산 모의 실험을 하였다. 등화기 수렴후의 에로 레벨에 따른 TOV(Threshold of Visibility) S/N(Signal to Noise)를 구해보면 호주의 실험실 측정과는 달리 0dB에서도 S/N이 26dB 정도이면 등화기는 안정적으로 수렴한다. 둘째 세그먼트 동기 복원을 세그먼트 싱크 필터(Segment Sync:+1, +1. -1, -1)를 사용했을 때 짧은 시간 지연 에코와 긴 시간 지연 에코에 대해 S 커브를 보면 짧은 시간 지연에코에서는 심볼 타이밍이 어긋났으며 긴 시간 지연 에로에서는 문제가 없이 타이밍 동기가 된다. 셋째 짧은 시간 지연 에코신호가 있을 때 세그먼트 동기 복원과 등화기를 연동한 전산 모의 실험을 하여 에코의 영향을 분석하고 FSE(Fractionally Spaced Equalizer) 등화기 사용에 따른 장점을 분석한다.

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The Spider Fauna of Chun Cheon area, Kangweon do, Korea (춘천지방의 거미상)

  • Namkung Joon;Paik Namkeuk
    • Korean journal of applied entomology
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    • v.12 no.3
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    • pp.131-137
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    • 1973
  • This paper is given for the first time as a list of spiders from Chuncheon area, in land of kang-weon-do, mid-eastern part of Korea. Materials were collected during the early August 1972 by the Biological members of the chuncheon girl's high school, in chuncheon area. In addition to this materials collected by paik and Nam kung during July 1973 at Mt. Sam-ak which is located on south-west of chuncheon were examined. 1) In this paper, tile authors record 105 species of spiders belonging to 22 families, including 4 undetermined species from chuncheon area. 2) The followings are newly added to the spider fauna in Korea. a) Curstulina sp. b) Zelotes asiaticus(BOES. et STR.) 3) These materials are not sufficient for general discussion of the spider fauna of chuncheon area, however, an outline can be summarized as follow: 21 northern species $(20.8\%)$ 5 southern species $(5.0\%)$ 3 cosmopolitan species $(3.0\%)$ 72 plaearctic species $(71.2\%)$

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