• 제목/요약/키워드: Specific mRNA

검색결과 857건 처리시간 0.024초

Upregulation by KCI Treatment of Eukaryotic Translation Elongation Factor 1A (eEF1A) mRNA in the Dendrites of Cultured Rat Hippocampal Neurons

  • Moon, Il Soo;Cho, Sun-Jung;Lee, HyunSook;Seog, Dae-Hyun;Jung, Yong Wook;Jin, IngNyol;Walikonis, Randall
    • Molecules and Cells
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    • 제25권4호
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    • pp.538-544
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    • 2008
  • Activity-dependent local translation in the dendrites of brain neurons plays an important role in the synapse-specific provision of proteins necessary for strengthening synaptic connections. In this study we carried out combined fluorescence in situ hybridization (FISH) and immunocytochemistry (IC) and showed that more than half of the eukaryotic elongation factor 1A (eEF1A) mRNA clusters overlapped with or were immediately adjacent to clusters of PSD-95, a postsynaptic marker, in the dendrites of cultured rat hippocampal neurons. Treatment of the neurons with KCl increased the density of the dendritic eEF1A mRNA clusters more than two-fold. FISH combined with IC revealed that the KCl treatment increased the density of eEF1A mRNA clusters that overlapped with or were immediately adjacent to PSD-95 clusters. These results indicate that KCl treatment increases both the density of eEF1A mRNA clusters and their synaptic association in dendrites of cultured neurons.

웅성호르몬에 의한 무지개송어의 vitellogenin 유전자 발현 (Expression of Vitellogenin Gene by Androgens in Rasinbow Trout, Oncorhynchus mykiss)

  • 권혁추;윤종만;이종영
    • 한국양식학회지
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    • 제13권1호
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    • pp.79-85
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    • 2000
  • 자성 및 웅성스테로이드 호르몬들이 Vg 유전자발현에 영향을 미치는지를 미성숙 무지개송어의 배양간세포 막간을 이용하여 조사하였다. 이미 보고된 송어의 Vg gene의 염기배열을 참고로 Vg cDNA 단편(600 bp)을 증폭시킬 수 있는 primer들을 작성하였다. 이들 primer를 이용하여 증폭된 PCR 산물의 염기배열을 결정하여 송어의 Vg cDNA임을 확인하였고, RT-PCR법을 이용하여 배양간세포 그리고 E$_2$ 및 MT 처리된 송어의 간으로부터 Vg mRNA의 전사량 변화를 조사하였다. 호르몬 처리된 간세포 및 송어의 간에서 추출한 total RNA를 이용하여 RT-PCR법으로 분석한 결과 in vivo, in vitro 실험 모두에서 E$_2$ 또는 MT처리된 간세포 및 송어의 간으로부터 Vg mRNA와 Vg 단백질합성이 유도되었고, 이들의 증가 경향은 처리된 호르몬 농도 및 시간에 의존하고 있음이 밝혀졌다. 또한 progesterone, androsterone 그리고 testosterone 등의 웅성호르몬들도 Vg mRNA의 전사를 유도하고 있다는 것이 시사되었다. 이와 같은 결과로부터E$_2$ 뿐 아니라 웅성스테로이드들도 Vg mRNA의 발현을 유도하고 있음이 송어의 in vivo 또는 in vitro 실험에 의해서 확인되었다.

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Downregulated microRNAs in the colorectal cancer: diagnostic and therapeutic perspectives

  • Hernandez, Rosa;Sanchez-Jimenez, Ester;Melguizo, Consolacion;Prados, Jose;Rama, Ana Rosa
    • BMB Reports
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    • 제51권11호
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    • pp.563-571
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    • 2018
  • Colorectal cancer (CRC), the third most common cancer in the world, has no specific biomarkers that facilitate its diagnosis and subsequent treatment. The miRNAs, small single-stranded RNAs that repress the mRNA translation and trigger the mRNA degradation, show aberrant levels in the CRC, by which these molecules have been related with the initiation, progression, and drug-resistance of this cancer type. Numerous studies show the microRNAs influence the cellular mechanisms related to the cell cycle, differentiation, apoptosis, and migration of the cancer cells through the post-transcriptionally regulated gene expression. Specific patterns of the upregulated and down-regulated miRNA have been associated with the CRC diagnosis, prognosis, and therapeutic response. Concretely, the downregulated miRNAs represent attractive candidates, not only for the CRC diagnosis, but for the targeted therapies via the tumor-suppressing microRNA replacement. This review shows a general overview of the potential uses of the miRNAs in the CRC diagnosis, prognosis, and treatment with a special focus on the downregulated ones.

생쥐 태아 및 성체 조직에서의 N-Methylpurine-DNA Glycosylase 유전자의 발현 (Expression of N-Methylpurine-DNA Glycosylase Gene during Fetal Development and Adult in Mice)

  • 손태종;김남근;이숙환;한세열;고정재;박찬;이우식;이찬;이용희;차광열
    • 한국발생생물학회지:발생과생식
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    • 제3권1호
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    • pp.101-105
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    • 1999
  • N-Methylpurine-DNA glycosylase (MPG)는 DNA에서 N-methylpurine과 다른 손상된 purine기를 제거하는 DNA 회복 효소이다. 생쥐의 임신 8일 후의 태아조직부터 생후 400일까지의 조직들로부터 RT-PCR 방법으로 MPG mRNA 발현을 조사하였다. MPG mRNA는 태아 형성기동안 많은 양이 발현되었으며, 특히 15일에서 가장 높게 발현되었다. 태반에서의 MPG mRNA는 8 p.c. (post coitum)부터 18 p.c. 까지 계속적으로 감소하였다. 태아 형성기의 뇌와 간 조직에서 높은 mRNA 발현을 보였으나, 400일 되는 성체에서는 현저히 감소하였다. 부정소, 정낭, 정소, 정관, 난소, 난관 그리고 자궁 등의 생식기관에서의 MPG mRNA는 비교적 높게 발현되었고, 그들 중 부정소에서의 발현 정도가 가장 높았다. 이러한 결과들로 보아 MPG 유전자는 태아 발생단계 및 조직 특이적으로 발현됨을 알 수 있었다.

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일회성 유산소운동 후 쥐의 골격근에서 toll-like receptor4, IL-6, TNF-α 및 suppressor of cytokine signaling-3의 근섬유 형태 특이적 발현 (Fiber Type Specific Expression of Toll-like Receptor4, IL-6, TNF-α, and Suppressor of Cytokine Signaling-3 after Acute Exercise in Rat Skeletal Muscles)

  • 이원준
    • 생명과학회지
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    • 제21권9호
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    • pp.1259-1265
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    • 2011
  • 본 연구의 목적은 일회성 유산소 운동이 TLR4, IL-6, TNF-${\alpha}$, SOCS-3 유전자 발현에 미치는 영향을 쥐의 골격근에서 살펴보는데 있었다. 또한 이러한 일회성 운동의 영향이 근섬유 형태 특이적으로 나타나는 지에 대한 연구도 수행되었다. 실험은 Balb/c 수컷 쥐(male: 7주령, 몸무게 $22.78{\pm}0.27g$) 13마리 대상으로 하였으며, 대조군과 운동군으로 무선배정되었다. 운동은 일회성으로 지칠 때까지 트레드밀 운동(경사도 $10^{\circ}$, speed 17 cm/sec 10 min, 33 cm/sec 10 min, 50 cm/sec)을 실시하였으며, 운동 후 24시간이 지난 시점에서 가자미근과 족저근을 적출하였다. 가자미근과 족저근의 TLR4, IL-6, TNF-${\alpha}$, SOCS-3 mRNA 수준 변화는 real-time PCR을 이용하여 측정하였다. 일회성 유산소 트레드밀 운동은 가자미근에서 TLR4 mRNA 발현을 유의하게 증가시켰지만, 족저근의 TLR4 mRNA 발현에는 유의한 영향을 미치지 않았다. 또한 IL-6, TNF-${\alpha}$, SOCS-3 mRNA 발현은 가자미근에서 일회성트레드밀 운동에 의해 유의하게 증가되었다. 하지만 족저근에서 이들 유전자의 mRNA 발현은 일회성 운동에 의해 영향을 받지 않았다. 결론적으로 TLR4, IL-6, TNF-${\alpha}$, SOCS-3와 같은 면역관련 유전자의 발현 수준은 일회성트레드밀 운동에 의해 근섬유 형태 특이적으로 조절됨을 알 수 있었다.

Zebrafish Dnd protein binds to 3'UTR of geminin mRNA and regulates its expression

  • Chen, Shu;Zeng, Mei;Sun, Huaqin;Deng, Wenqian;Lu, Yilu;Tao, Dachang;Liu, Yunqiang;Zhang, Sizhong;Ma, Yongxin
    • BMB Reports
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    • 제43권6호
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    • pp.438-444
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    • 2010
  • Dnd (dead end) gene encodes an RNA binding protein and is specifically expressed in primordial germ cells (PGCs) as a vertebrate-specific component of the germ plasma throughout embryogenesis. By utilizing a technique of specific nucleic acids associated with proteins (SNAAP), 13 potential target mRNAs of zebrafish Dnd (ZDnd) protein were identified from 8-cell embryo, and 8 target mRNAs have been confirmed using an RT-PCR analysis. Of the target mRNAs, the present study is focused on the regulation of geminin, which is an inhibitor of DNA replication. Using electrophoretic mobility shift assay (EMSA), we demonstrated that ZDND protein bound the 67-nucleotide region from 864 to 931 in the 3'UTR of geminin mRNA, a sequence containing 60.29% of uridine. Results from a dual-luciferase assay in HEK293 cells showed that ZDND increases the translation of geminin. Taken together, the identification of target mRNA for ZDnd will be helpful to further explore the biological function of Dnd in zebrafish germ-line development as well as in cancer cells.

Molecular Cloning of Adipose Tissue-specific Genes by cDNA Microarray

  • Kim, Kee-Hong;Moon, Yang Soo
    • Asian-Australasian Journal of Animal Sciences
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    • 제16권12호
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    • pp.1837-1841
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    • 2003
  • In an attempt to isolate novel molecules that may play a regulatory role in adipocyte differentiation, we devised an experimental strategy to identify adipose tissue-specific genes by modifying cDNA microarray technique. We used genefilter membranes containing approximately 15,000 rat non-redundant EST clones of which 4,000 EST were representative clones of known genes and 11,000 ESTs were uncharacterized clones. A series of hybridization of genefilter membranes with cDNA probes prepared from various rat tissues and nucleic acids sequence analysis allowed us to identify two adipose-tissue specific genes, adipocyte-specific secretory factor (ADSF) and H-rev107. Verification of tissue-specific expression patterns of these two genes by Northern blot analysis showed that ADSF mRNA is exclusive expressed in adipose tissue and the H-rev107 mRNA is predominantly expressed in adipose tissue. Further analysis of gene expression of ADSF and H-rev107 during 3T3-L1 adipocyte differentiation revealed that the ADSF and H-rev107 gene expression patterns are closely associated with the adipocyte differentiation program, indicating their possible role in the regulation of adipose tissue development. Overall, we demonstrated an application of modified cDNA microarray technique in molecular cloning, resulting in identification of two novel adipose tissue-specific genes. This technique will also be used as a useful tool in identifying novel genes expressed in a tissue-specific manner.

랑게르한스세포에서 IL-1$\beta$ mRNA 발현에 대한 Pedunculagin의 효과 (Effect of Pedunculagin on IL-1$\beta$ mRNA Expression in Langerhans cells)

  • 주성수;권희승;강희철;이도익
    • 약학회지
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    • 제46권6호
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    • pp.472-476
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    • 2002
  • Contact hypersensitivity (CHS) serves as a good model of cell-mediated reaction. Epidermal langerhans cell (LC) are thought to playa crucial role in the regulation of immune reaction of the skin, which elicit the CHS response by presenting Antigen to trafficking Ag-specific T cells within the skin. However, contact hypersensitivity is regarded as a negative side of immunities, caused by increased damaging immune response. Therefore, the study of effector molecule causing immune suppression is thought to be meaningful in the skin immune response. For this aim, this study investigated the influence of pedunculagin on cytokine, IL-$\beta$ expression from langerhans cell (LC). In vitro and in vivo, pedunculagin up-regulated the expression of IL-1$\beta$ mRNA. After PMA stimulation in vitro and DNFB sensitization in vivo, the expression of IL-1$\beta$ mRNA was down-regulated. This results suggested that pedunculagin could be immuno-modulator in skin immune system by modulating IL-1$\beta$ expression.

Regulation of Macrophage Ceruloplasmin Gene Expression: One Paradigm of 3'-UTR-mediated Translational Control

  • Mazumder, Barsanjit;Sampath, Prabha;Fox, Paul L.
    • Molecules and Cells
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    • 제20권2호
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    • pp.167-172
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    • 2005
  • Ceruloplasmin (Cp) is a copper protein with important functions in iron homeostasis and in inflammation. Cp mRNA expression is induced by interferon (IFN)-${\gamma}$ in U937 monocytic cells, but synthesis of Cp protein is halted after about 12 h by transcript-specific translational silencing. The silencing mechanism requires binding of a 4-component cytosolic inhibitor complex, IFN-gamma-activated inhibitor of translation (GAIT), to a defined structural element (GAIT element) in the Cp 3'-UTR. Translational silencing of Cp mRNA requires the essential proteins of mRNA circularization, suggesting that the translational inhibition requires end-to-end mRNA closure. These studies describe a new mechanism of translational control, and may shed light on the role that macrophage-derived Cp plays at the intersection of iron homeostasis and inflammation.

mRNA Expression of Bax, Bcl-2, p53, Cathepsin B, Caspase-3 and Caspase-9 in the HepG2 Cell Line Following Induction by a Novel Monoclonal Ab Hep88 mAb: Cross-Talk for Paraptosis and Apoptosis

  • Mitupatum, Thantip;Aree, Kalaya;Kittisenachai, Suthathip;Roytrakul, Sittiruk;Puthong, Songchan;Kangsadalampai, Sasichai;Rojpibulstit, Panadda
    • Asian Pacific Journal of Cancer Prevention
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    • 제17권2호
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    • pp.703-712
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    • 2016
  • Monoclonal antibodies with specific antigens have been widely used as targeted therapy for cancer. Hep88 mAb is a monoclonal antibody which shows specific binding with anti-cancer effects against the HepG2 cell line. However, its mechanisms of action are still not completely understood. We examined cell cycling and apoptosis by flow cytometry and mRNA expression of factors involved in apoptosis and paraptosis in Hep88 mAb-treated HepG2 cells by real-time PCR. The cell-cycle analysis demonstrated that growth-inhibitory activity was associated with G2/M cell cycle arrest. Hep88 mAb induced a significant increase in apoptotic cell populations in a dose- and time-dependent manner. The mRNA expression results also suggested that the process triggered by Hep88 mAb involved up-regulation of tumor suppressor p53, pro-apoptotic Bax, Cathepsin B, Caspase-3 and Caspase-9, with a decrease of anti-apoptotic Bcl-2 - thus confirming paraptosis and apoptosis programmed cell death. These findings represent new insights into the molecular mechanisms underlying the anti-cancer properties of Hep88 mAb in liver cancer cells.