• Title/Summary/Keyword: Species recognition

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Identification and Characterization of Bombyx mori LDH Gene through Bioinformatics Approaches

  • Zhu, Minfeng;Chen, Keping;Yao, Qin
    • International Journal of Industrial Entomology and Biomaterials
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    • v.15 no.2
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    • pp.137-143
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    • 2007
  • Lactate dehydrogenase (LDH) is a ubiquitous enzyme that plays a significant role in the clinical diagnosis of pathologic processes. Discovery of the LDH (BmLDH) gene in B. mori may shed light on its role in the biology of Lepidoptera species, and afford further understanding of the function of the enzyme. In this study, we used the bioinformatics tools to identify LDH gene in B. mori. Sequence analysis showed that BmLDH cDNA contains a 996 bp open reading frame, encoding 331 AA proteins, with seven introns. Compared with hHLDH (human heart LDH), BmLDH contained the same key active sites. Domain search and protein fold recognition analyses provide compelling evidences that the deduced protein is a LDH. Using the computer program MEGA3, we conducted a search for homologs of BmLDH among many eukaryotic species and confirmed that the BmLDH was conserved in all organisms investigated. This gene has been registered in GenBank under the accession number EU000385.

Function of Multimeric MADS Protein Complexes in Floral Organ Development of Plant

  • Park, Ji-Im;Moon, Yong-Hwan
    • Journal of Photoscience
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    • v.12 no.3
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    • pp.163-169
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    • 2005
  • Recent reports suggest that floral organs such as sepals, petals, stamens, and carpels are specified by quaternary MADS protein complexes with different combinations. The formation of quaternary complexes of ABCDE MADS proteins may be the molecular basis of ABCDE model for the floral organ development. The MADS complexes involved in each floral organ development seem to be conserved in at least dicot species although detailed molecular mechanism is slightly different depending on species. Even in monocot, at least rice, MADS complexes similar to those in dicot exist, suggesting that the floral organ specification by MADS protein complexes may be conserved in most of plants. The MADS protein complexes may have more specific recognition of target genes or more transcription activation ability than monomers or dimers, resulting in finely regulated floral organ development.

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Development of Information Biology (II)

  • Tateno, Yoshio
    • Interdisciplinary Bio Central
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    • v.5 no.2
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    • pp.4.1-4.3
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    • 2013
  • A history of discoveries of a gene and DNA was viewed with respect to people, time and places. It started with G. Mendel and J. Meisher, who discovered a gene in a plant species in 1866 and DNA in animals in 1869, respectively. With recognition that DNA was a chemical substance, A. Kossel identified the four chemical components of DNA without knowing their biological function around the turn of the 19th century. On the other hand F. Griffith found a peculiar activity in a bacterial species in 1928, but victimized by the war before understanding what it was. Those discoveries were made in Europe, but they were still fragmentary. Then, in USA, O. T. Avery, A. Hershey, M. Nirenberg and other scientists organized the European discoveries and elucidated their coordinated biological functions in 1950's and 1960'.

Genetic Differentiation and Reproductive Isolation among Three Tvpes of the floating Gobv (Chuenogobius annufuris) in Korea (한국산 꾹저구(Chaenogobius annularis) 3형의 유전적 분화 및 생식적 격리)

  • 석호영;김종범민미숙양서영
    • The Korean Journal of Zoology
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    • v.39 no.2
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    • pp.147-158
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    • 1996
  • Since the floating goby, Choenogobius onnuloris, has intricate and diverse morphological variations, allozymic analysis at 25 loci was carried out for their populations in Korea to clarify its taxonomic status. A genetic assay carried out revealed that the floating gobies were clearly divided into three genetic groups (Tvpe-A, Tvpe-B and Tvpe-C) in Korea. Alternative alleles were fated at six loci (Aco, 6pgd, Ldh-1, Got-1, Gpf, Gp3l. Some loci had considerable heterogeneitv among three types and no evidence of gene exchange in slunpatric populations was found from statistical analyses. The genetic similarity (Rogers'S) among three types was lower than 0.80 and divergent time estimate indicates that they were speciated during 1.2-1.8 million year before present (WBP). ASso, these three types of C. unnuluris were distinguished morpholosicallv from each other by several characters such as band ornamentations. In conclusion, the evidences presented here support recognition of three types of Chuenogobius annularis as typical discrete species.

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A Taxonomic Revision of Deutzia Thunb. (Hydrangeaceae) in Korea

  • Ju Eun Jang;Mi Jung Choi;Dong Chan Son;Hyeok Jae Choi;Hee-Young Gil
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2022.09a
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    • pp.57-57
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    • 2022
  • A taxonomic revision of Deutzia in Korea was conducted based on critical observations of wild populations and herbarium specimens. Species delimitations were re-evaluated on the basis of morphological characters and distributions resulting in the recognition of five taxa. The texture of leaf, flower disk and capsules, the shape of leaf, inflorescence and capsules are useful diagnostic traits at the specific level. The five taxa are well distinguished from each other. Deutzia grandiflora var. baroniana can be distinguished by its distribution and calyx from Deutzia uniflora, which are morphologically similar. Deutzia paniculata Nakai, a rare and endemic plant, is characterized by having panicle in inflorescences. On the other hand, Deutzia glabrata Kom. is occasionally confused with Deutzia parviflora, but the most distinctive characters include the surface of leaves, the surface and size of capsules. Photographs and a key to five species of Deutzia were provided in addition to distribution.

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A Study on the Identification Odorants using Six Channel Piezoelectric Crystals (6채널 압전소자를 이용한 냄새인식에 관한 연구)

  • 권영수;장상목;박옥순;최용성
    • The Transactions of the Korean Institute of Electrical Engineers
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    • v.41 no.8
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    • pp.947-950
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    • 1992
  • At-cut quartz crystal has been applied as chemical vapour sensors. The responses of quartz crystal at 9 MHz coated with phosphatidylglycerol(PG), phosphatidylinositol(PI), phosphatidylethanolamine(PE), phosphatidylserine(PS), and lipid A(LA) are determined for amyl acetate, acetoin, menthone and other organic gases which showed different affinities for each lipid. The identification of odorants depending on the species of lipid used for coating is discussed in terms of the normalized resonant frequency shift pattern.

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Fine grained recognition on a species of animal from image using Tensorflow (Tensorflow를 이용한 애완동물 영상 세부 분류)

  • Kim, Ji-Hae
    • Proceedings of the Korean Society of Broadcast Engineers Conference
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    • 2020.07a
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    • pp.684-685
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    • 2020
  • 영상의 세부 분류 인식에 대한 연구는 계속적으로 발전하고 있지만, 다형성의 성질을 갖는 동물에 대한 객체인식 연구는 더디게 진행되고 있다. 본 논문은 개와 고양이에 해당하는 애완동물 이미지만을 이용하여, 세부 분류인 동물의 종을 분류하는 것을 목표로 한다. 이를 위해 본 논문에서는 기계학습으로 여러 분야에서 좋은 성과를 얻고 있는 딥러닝을 이용하였으며, 그 중에서도 이미지 인식 분야에서 뛰어난 성능을 보인 Convolutional Neural Network(CNN)과 구글에서 제공하는 오픈소스 기반 딥러닝 프레임워크인 Tensorflow를 활용하였다. 제안하는 방법에 대해 37종의 애완동물 이미지, 총 7390장에 대하여 학습 및 실험하여 그 효과를 검증하였다.

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Hemaggulutinin and Hemolysin in Korean Ascidians

  • Park, Gyeong-Suk;Lee, In-Suk;Ro, Bun-Jo;Mok, Je-Won
    • Animal cells and systems
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    • v.2 no.1
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    • pp.107-111
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    • 1998
  • Two kinds of humoral factors were observed in 2 orders, 7 families, 10 genera, and 15 different species of Korean ascidians. They are the naturally occuring hemagglutinins and/or hemolysins against human erythrocytes A, B, and 0. All but two species showed aggregative activity, although there were considerable variations in titer. The weak agglutinating and lytic activities were increased in the presence of $Ca^{++}$. Much higher activities of agglutination and/or lysis were shown in the hemolymph than extracts from tissues, and a higher response was shown in adults than in juveniles. No distinct differences from collected locations were observed. The hemolymph of Ciona intestinalis showed a strong hemolytic (cytotoxic) and weak agglutinins capacities. In addition, hemolymph of Styela plicata and Styela clava clava also showed hemoagglutining and hemolytic activities. Botryllus tuberatus had hemagglutining and weak lytic activities. Other species showed only hemagglutining activity. These agglutining activities are probably responsible for carbohydrate recognition in solitary or colonial ascidian. The lytic activity is probably responsible for antibacterial defense and nonfusion reactions between allogeneic colonial ascidians, especially the genus of Botryllus. The occurrences of humoral factors in ascidians were independent of their geographic distributions.

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Occurrence and Decontamination of Mycotoxins in Swine Feed

  • Chaytor, Alexandra C.;Hansen, Jeff A.;Van Heugten, Eric;See, M. Todd;Kim, Sung-Woo
    • Asian-Australasian Journal of Animal Sciences
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    • v.24 no.5
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    • pp.723-738
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    • 2011
  • Contamination of agricultural crops by mycotoxins results in significant economic losses for grain producers and, when consumed, it can cause reduced growth and health in a wide range of animal species. Hundreds of mycotoxin producing molds exist, however each has a different frequency and pattern of occurrence, as well as differences in the severity of the diseases (mycotoxicoses) they cause. Among the mycotoxins considered to be major contaminates are aflatoxin, deoxynivalenol, fumonisin, ochratoxin, and zearalenone. Although a multitude of species can be harmed by consumption of these mycotoxins, swine appear to be the most commonly affected commodity species. The swine industry can thus experience great losses due to the presence of mycotoxin contamination in feeds. Subsequently, recognition and prevention of mycotoxicoses is extremely important and dependent on adequate grain sampling and analysis methods pre-harvest, as well as effective strategies post-harvest to reduce consumption by animals. The aim of this review is to provide an overview of the major mycotoxin contaminants in grains, to describe methods of analysis and prevention to reduce mycotoxicoses in swine and other animals, and finally to discuss how mycotoxins directly affect swine production.