• Title/Summary/Keyword: Sp9

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Sequence Analysis and Expression of Xylanase Gene (xynY) from Alkalophilic Bacillus sp. YC-335

  • Park, Young-Seo;Yum, Do-Young;Kim, Jin-Man;Bai, Dong-Hoon
    • Journal of Microbiology and Biotechnology
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    • v.3 no.4
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    • pp.224-231
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    • 1993
  • The nucleotide sequence of the xylanase gene (xynY) from alkalophilic Bacillus sp. YC-335 was determined and analyzed. An open reading frame of 1, 062 base pairs for xynY gene was observed and encoded for a protein of 354 amino acids with a molecular weight of 38, 915. S1 nuclease mapping showed that the transcription initiation sites of the xynY gene were different in Bacillus sp. YC-335 and Escherichia coli HB101 (pYS55). S1 mapping also showed that -10 region of the xynY gene recognized by RNA polymerases of E. coli and Bacillus sp. YC-335 were TACAGT and TATGAT , respectively. A ribosome binding site sequence with the free energy of -17.0 Kcal/mol was observed 9 base pairs upstream from the unusual initiation codon, TTG. The proposed signal sequence consisted of 27 amino acids, 2 of which were basic amino acid residues and 21 were hydrophobic amino acid residues. When the amino acid sequences of xylanases were compared, Bacillus sp. YC-335 xylanase showed more than 50% homology with xylanases from B. pumilus, B. subtilis, and B. circulans.

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The Effect of Electroacupuncture at the SP 6 (Sameumgyo)-GB 39 (Hyeonjong) on the EEG (삼음교-현종 전침 자극이 EEG에 미치는 영향)

  • Lee Tae-Yong;Lee Sang-Ryong
    • Korean Journal of Acupuncture
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    • v.20 no.3
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    • pp.9-27
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    • 2003
  • Objectives : The aim of this study was to examine the effects of electro-acupuncture(EA) at the SP6(Sameumgyo)-GB39(Hyeonjong) on normal human EEG using power spectral analysis. Methods : EEG power spectrum exhibit site-specific and state-related differences in specific frequency bands. In this study, power spectrum was used as a measure of complexity(LAXTHA Co., KOREA). 30 channel EEG study was carried out in 20 subjects $(20\;males;\;age=21.4{\pm}0.5\;years)$. Results : In $\alpha$(alpha) band, the power values at F4 channels(p<0.05) during the SP6-GB39 acupoints treatment was significantly increased. But, the power values at Fz channel during the non-acupoint treatment was significantly decreased . In $\beta$(beta) band, the power values at Fz, FTC1, T3 channels(p<0.05) was significantly increased during the SP6-GB39 acupoints treatment. In $\delta$(delta) band, the power values at F4, C3, Cz, CP1, Pz channels(p<0.05) during SP6-GB39 acupoints treatment were significantly decreased.

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An Antibiotic from Actinomycetes Becoming Effective for Cephalosporin Resistant Pathogenic Pesudomonas sp. (방선균이 생산하는 Cephalosporin 내성 병원성 Pseudomonas에 유효한 항생물질)

  • 하병조
    • The Korean Journal of Food And Nutrition
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    • v.12 no.3
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    • pp.271-278
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    • 1999
  • We isolated activnmycetes LAM-98-80 as strain producing an effective antibiotic for cephalosporin re-sistant pathogenic PSeudomonas sp. and identified as Streptomyces sp. LAM-98-80 from cultural and phyisological characteristics. We investigated the optimal culture conditions for producation of an anti-biotic becoming effective for cephalsporin-resistant pathogenic Pseudomonas sp. It was found that 1.5% soluble starch and 1.0% yeast extract were good as carbon and nitrogen source respectively. The pro-duction of antibiotic was also activated by 0.04% Mn2+ as 80% degree. The optimum initial pH on pro-ductio of antibiotic was pH 7.0. The culture condition for the maximal productivity of the antibiotic was at 3$0^{\circ}C$ for 5 days. The cephalosporin-resistant pathogenic Pseudomonas sp. as test bacteria was rev-ealed to resist antibiotic of cepha families but revealed to not resist those of $\beta$-lactam families ampicil-lin and amoxicillin. Parital purified antibiotic was stable for the pH from 3 to 9 and was also stable when treated at 70 $^{\circ}C$ for 1 hour, This antbiotic was effective against all gram positive and negative bac-teria but was not effective against molds and yeasts.

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Infections of Larval Stages of Dicrocoelium dendriticum and Brachylaima sp. in Brown Garden Snail, Helix aspersa, in Turkey

  • Kose, Mustafa;Eser, Mustafa;Kartal, Kursat;Bozkurt, Mehmet Fatih
    • Parasites, Hosts and Diseases
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    • v.53 no.5
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    • pp.647-651
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    • 2015
  • The aim of this study was to determine the presence and prevalence of larval stages of Dicrocoelium dendriticum and Brachylaima sp. in the first intermediate host, a species of land snail, Helix aspersa, in Turkey. A total of 211 snails were collected in April-May 2014 from pastures in Mersin District. Larval stages of D. dendriticum were identified under a light microscope. Hepatopancreas from naturally infected H. aspersa snails were examined histologically. The prevalence of larval stages of D. dendriticum and Brachylaima sp. in H. aspersa snails was found to be 2.4% and 1.9%, respectively, in Mersin, Turkey. Cercariae were not matured in sporocysts at the beginning of April; however, it was observed that cercariae matured and started to leave sporocysts by early-May. Thus, it was concluded that H. aspersa acts as an intermediate host to D. dendriticumin and Brachylaima sp. in Mersin, Turkey. A digenean trematode Brachylaima sp. was seen for the first time in Turkey.

Preliminary Data on the Ratio of D(-)-Lactate and L(+)-Lactate Levels in Various Lactic Acid Bacteria as Evaluated using an Enzymatic Method

  • Song, Kwang-Young
    • Journal of Dairy Science and Biotechnology
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    • v.40 no.1
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    • pp.15-22
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    • 2022
  • This study evaluated the levels of D(-)-lactate and L(+)-lactate, and the ratio of D(-)-lactate to total lactate (D(-)-lactate + L(+)-lactate) of 15 lactic acid bacteria (LAB) using an enzymatic method. D(-)-lactate and L(+)-lactate levels in the LAB ranged from 0.31 to 13.9 mM and 0.76 to 39.3 mM, respectively, in Bifidobacterium sp.; 1.08 to 11.7 mM and 0.69-13.0 mM in Lactobacillus sp.; 0.72 to 20.3 mM and 0.98 to 32.3 mM in Leuconostoc sp., and 33.0 mM and 39.2 mM in Pediococcus acidilacti KCCM 11747. The ratio of the range of D(-)-lactic acid to total lactic acid was 28.98%-45.76% in Bifidobacterium sp., 41.18%-61.02% in Lactobacillus sp., 29.85%-42.36% in Leuconostoc sp., and 45.71% in P. acidilacti KCCM 11747. In the future, there is a need to test for D(-)-lactate in various fermented products to which different LAB have been added and study the screening of LAB used as probiotics that produce various concentrations of D(-)-lactate.

Characteristics and Seasonal Variations in the Structure of Coleoptera Communities (갑충군집(甲蟲群集)의 구조적(構造的) 특성(特性)과 계절적(季節的) 발생소장(發生消長))

  • Kim, Ho Jun
    • Journal of Korean Society of Forest Science
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    • v.80 no.1
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    • pp.82-96
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    • 1991
  • This study was carried out to investigate the structural characteristics of Coleoptera communities inhabiting the crowns of the Korean pine(Pinus koraiensis S. et Z.). Four plantations of the Korean pine, stand A (11 years old), stand B(21 years old), stand C(31 years old), and stand D(46 years old), were selected in Sudong-myen, Namyangju-gun, Kyeonggi-do. Sampling was done by knock down methods using insectide(DDVP), which was conducted from April, 1986 to September, 1987, except for the winter season. The following major conclusions are drawn from this study : 1. The total number of Coleoptera was 107 species of 85 genera in 35 families : 83 species of 66 genera in 27 families in 1986 and 74 species of 52 genera in 30 families in 1987. 2. The abundant families, based on the number of species, were Staphylinidae (16.8%), Coccinellidae(7.5%), Chrysomlidae(6.5%), Curculionidae(6.5.%), and Cerambycidae(5.6%). These five families occupied 43.0% of the total number of species. 3. The important families, based on the number of individuals, were Cantharidae(28.2%), Catopidae(27.7%), and Coccinellidae(23.0%). These three families occupied 78.9% of the total number of individuals. 4. The important species, based on the number of individuals, were Podabrus sp. (22.6%, C-antharidae), Catnps sp. 1 (21.7%. Catopidae), Anatis halonis (15.2%. Coccinellidae). Dominant species was Podabrus sp. (25.2% in 1986 and Catops sp. 1(24.9%) in 1987. 5. Generally, more spices and individual numbers were found in older stands than in younger ones. 6. The Coleoptera communities decreased in the thinned stand (stand C). Such a phenomenon in the thinned stand was likely to last two or more years. 7. The Coleoptera communities reached their peak of abundance in May, and decreased thereafter.

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Anti-proliferation Effect of Coscinoderma sp. Extract on Human Colon Cancer Cells (Coscinoderma sp.의 대장암세포 증식 억제 효과)

  • Choi, Ki Heon;Jung, Joohee
    • Journal of Food Hygiene and Safety
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    • v.31 no.4
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    • pp.294-298
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    • 2016
  • Natural products are attractive as the source of new drug development. Especially, numerous unknown marine bioresources are an object of attention because the ocean occupies three fourth of the earth. Survival of marine bioresources in extreme environment may induce the production of biological active compounds. As previous study, we examined over 40 specimens of marine sponges collected from Micronesia and screened their anti-proliferative activities in various cancer cell lines. Among them, we investigated Coscinoderma sp.'s activity and mechanism in human colon carcinoma HCT116 and RKO cells. Furthermore, we also used the p53-knockout of HCT116 cells and the p53 loss of RKO cells for elucidating the role of p53. Coscinoderma sp. inhibited cellular viability independently of the p53 status. Therefore, we compared the expression level of cell death-related proteins by Coscinoderma sp. in HCT16 and in HCT116 p53KO cells. Coscinoderma sp. increased p53 level and NOXA levels and induced apoptosis under the condition of p53 existence. On the other hand, Coscinoderma sp. increased p21 and mTOR levels in HCT116 p53KO cells. These results suggest that Coscinoderma sp. induced anti-proliferation effect through different pathway depending on p53 status.

Isolation of Ammonia Oxdizing Bacteria and their Characteristics (암모니아 산화세균의 분리와 그 특성)

  • LEE Myung Suk;PARK Jee Hyun
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.31 no.5
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    • pp.760-766
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    • 1998
  • This study was carried out far isolation and characterization of ammonia oxidizing bacteria (AOB) from aquacultural place and sludges of waste water collected in Pusan. One autotrophic AOB, Nitrosomonas sp. and 8 heterotrophic AOB (2 strains of Bacillus sp., 2 strains of Acinetobacter sp., Xanthomonas sp., Alcaligenes sp., Pseudomonas sp., Sphingobacterium sp.) were isolated. and identified. Variation of total nmmonia nitrogen (TAN) and $NO_2-N$ in mineral salt media containing 10mg/ $\ell$ of NHCl for 15 days in differents 9 strains was measured in order to examine the ablitity of ammonia oxidation. TAN was started to reduce after 4 days incubation and ca. 2 mg/$\ell$ of TAN was decreased after 15 days incubation by Nitrosomonas sp., At that time, $NO_2-N$ was produced to 0.023$\~$0.036 mg/$\ell$. Heterotrophic AOB showed the low ability of ammonia oxidation, 0.02$\~$0,04 mg/$\ell$ of TAN was decreased and $NO_2-N$ was produced to 0.01$\~$0.51 mg/$\ell$ after 15 days. When each strain of 8 heterotrophs was incubated in mimeral salt media containing 10 mg/$\ell$ $NH_4Cl$ and 50 mg/$\ell$ glucose, and 50 mg/$\ell$ $NH_4Cl$ and 5 g/$\ell$ glucose, the diminution of TAN was 1.12$\~$3.38 mg/$\ell$ and 1$\~$20 mg/$\ell$, respectively.

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The Spider Fauna of Mt. Gamak, Paju-gun, Kyeonggi-do (감악산의 거미상)

  • Namkung Joon;Yoon Kyeong-il
    • Korean journal of applied entomology
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    • v.14 no.1 s.22
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    • pp.37-42
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    • 1975
  • Mt. Gamak is located south of the Imjin river, near the D.M.Z.: and the spider fauna of this area has never been explored. Tile authors collected spiders from this mountain since 1972. Findings were: 1) The authors recorded 115 species of spiders belonging to 21 families, 73 genera. including 7 undetermined spcies. 2) Trachelas japonicus was added to the fauna for the first time. Identification of Dictyna sp. (W), Episinus sp. (A) and Coeloter sp. (A) have not yet been completed by the authors. 3) These materials Iwere not sufficient for general discussion and conclusions of the spider fauna of Mt. Gamak area. However, results can be summarized: 21 northern species-$19.4\%$, 5 southern species-$4.6\%$, 1 cosmopolitan species-$0.9\%$ 4) Species common with China mainland were 45($41.7\%$). 5) As the result of this survey, the spider fauna of this area is similar to that of the Chun-cheon area, located at the same latitude in central Korea.

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Geochemical Study on Pegmatites in Central Region of Taebaek Mineralized Area (태백산(太白山) 광화대(鑛化帶) 중부지역(中部地域) 페그마타이트에 대한 지화학적(地化學的) 연구(硏究))

  • Choi, Sung-Hoon;Chi, Jeong-Mahn
    • Economic and Environmental Geology
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    • v.23 no.1
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    • pp.35-57
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    • 1990
  • This study has been carried out on the Pegmatites, Naedeogri Granites, Nonggeori Granites and Metasedimentary rocks in the middle area of Taebaeksan region to investigate the geochemical properties and possibility of productivity. Pegmatites are characterized by metamorphosed anatectic pegmatite and differentiated magmatic pegmatite, and are mixed type of rare-element pegmatite and mica-bearing pegmatite by the classification of Ginsburg(1979). The petrological type of the igneous rocks is thought to be calcalkali, subalkaline and peralumious. According to chemical variations against D. I., differentiation trends from Naedeogri and Nonggeori Granites through non-mineralized pegmatites to mineralized pegmatites are supposed. From the relationship between oxided and $SiO_2$, pegmatites and Nonggeori Granite have shown similar tendencies and bulk composition of pegmatites and similar to metasedimentary rocks near the intrusives. By judging the correlations of trace elements, it is elucidated that pegmatites adjacent to Naedeogri and Nonggeori Granites have been originated in magma differentiation from these granites and the others have been differentiated by remelting or partial melting from metasedimentary rocks. $Sp_5$, $Sp_8$, and $Sp_9$ pegmatites are considered as productive rocks, and $Sp_4$, $Sp_6$, $Sp_7$, $Sp_{10}$, $Sp_{11}$, and $Sp_{12}$ pegmatites and granites are supposed to have a weak productivity, in terms of element ratios related with Sn mineralizations. Tourmalines in productive pegmatites are formed under the circumstance of Li-poor granitoids and associated with pegmatites, and the others are seemed to be originated in metapelites and metapsammites which are not coexisting with an Al-saturating phase. Three types of chemical zoning are noticed in tourmalines: (1) apparently homogeneous compositional patterns, (2) a continuous core-to-rim zoning and, (3) a discontinuous core-to-rim zoning. From results of EPMA of tourmalines, Al, Mg and Ca increase closer to rim, while Fe decreases.

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