• Korean Journal of Soil Science and Fertilizer
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• v.47 no.3
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• pp.199-204
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• 2014

We conducted a short-term incubation experiment in order to understand the effect of the salinity of reclaimed coastal soils on nitrogen mineralization of livestock manure compost (LMC). Two soils with the same soil texture but different EC levels were collected from the same field. These samples were treated with 0%, 1%, 2%, and 3% of LMC by weight basis and incubated at $25^{\circ}C$ to observe changes in inorganic N contents, pH, and dehydrogenase activity with respect to time. As a result, regardless of the soil EC level, as the LMC increased, the total content of the inorganic N ($NH_4{^+}+NO_3{^-}$) increased. Difference in the soil EC level did not affect N mineralization of LMC greatly. The soil EC had negligible effect on the dehydrgenase activity as with the case of inorganic nitrogen. The $NH_4{^+}$ contents remained very low throughout the experimental period starting from the first week of incubation. We believe this is due to the high pH level (pH 7.9 and pH 8.3) of the original soils leading to ammonia volatilization. On the other hand the $NO_3{^-}$ content maintained high level as the LMC treatment level increased and reached maximum at the third week. The pH of the soil during incubation period decreased as the $NO_3{^-}$ contents increased and increased slightly after three weeks. The rise of pH level is believed to be from the $NO_3{^-}$ absorption for immobilization by microbes. In conclusion, the high soil $EC_{1:5}$ level of $12dS\;m^{-1}$ conducted in this experiment did not affect the growth in terms of soil microbes involved in N mineralization of LMC.

• Korean Journal Plant Pathology
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• v.13 no.1
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• pp.46-56
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• 1997

Based on the principal component analysis (PCA) of Richards' parameter estimates, ginseng field soils were grouped as the principal component 1 (PC1) and the principal component 2 (PC2). The microflora and physico-chemical characteristics of each soil group were compared to elucidate soil environmental factors affecting the disease development of root rot of ginseng seedling. Among 3 soil groups by PC1, there were differences in the populations of total fungi (TF) and Cylindrocarpon plus Fusarium (C+F), and the population ratio of Cylindrocarpon plus Fusarium to total fungi or total bacteria (C+F/TF, C+F/TB) in rhizoplane of ginseng seedlings, the population of total actinomycetes (TA) and the population ratio of total Fusarium to total actinomycetes (Fus/TA) in soil, and soil chemical properties (EC, NO3-N, K, Mn, ect.). Among 4 soil groups by PC2, there were differences in TF, C+F, TB, C+F/TF and C+F/TB in the rhizoplane, Trichoderma plus Gliocladium (T+G) in soil, and P2O5 content in soil. Especially, EC, NO3-N, K, K/Mg and Mn were positively correlated to PC1, and TA was negatively to PC1; however, TF, C+F, TB, C+F/TF and C+F/TB in the rhizoplane were significantly correlated to PC2 positively. On the other hand, microbes in the rhizoplane were not significantly correlated to the stand-missing rate (SMR), although TA and Fe/Mn were negatively correlated, and pH and Ca were positively correlated to SMR.

• Journal of Ecology and Environment
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• v.33 no.3
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• pp.223-228
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• 2010

Soil microbes perform crucial roles in the nutrient cycles of forest ecosystems, by effecting the decomposition of organic matter. Enzyme activities have been used to evaluate decomposition rates, as well as microbial activities. The principal objectives of this study were to determine the activities of different soil enzymes, to compare enzyme activities at different elevations, and to elucidate the most important controlling variables for enzyme activities. We conducted a field survey at three sites in Mt. Jumbong on a monthly basis from May, 2004 to September, 2005. Enzyme activities did not change substantially over different seasons. However, the spatial differences were distinct; the lowest elevation site evidenced the lowest levels of enzyme activity. Soils at the lowest elevation were nutrient-depleted soils, and enzyme activities appeared to be affected by precipitation and temperature. However, enzyme activities in fertile soils at high elevations were associated with nutrients and organic matter. The enzyme activities detected in this study differed significantly at the three elevations, and their controlling variables also evidenced different factors.

• 한국생물공학회:학술대회논문집
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• 2004.07a
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• pp.107-125
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• 2004

A bioremediation of petroleum-contaminated soil in Korea was evaluated for the optimization of enhanced biodegradation and the minimization of effects of seasonal variations, The short-term bioremediation in combination of biopile pretreatment and landfarming was performed by lowering contaminated levels and overcoming the inhibiting factors in the rainy and winter seasons. A microbial density was maintained with indigenous microbial addition for bioaugmentation and with fertilizers for biostimulation. A lesser volatile and biodegradable fraction due to their abiotic removals following the biopile pretreatment was effectively removed by the laterally applied landfarming. The optimal temperature in greenhouse was maintained by buffering of the soil temperature even with slight decreases in removal rates during the winter and extensive leaching of nutrients and contaminants was restricted with adjusting the water contents during the Korean rainy season. Although the tilling process was effective for biodegradation with aeration only, the simultaneous treatment due to apparent mixing of nutrients and microbes more favorably degraded the petroleum than the sequential treatment.

• Journal of Microbiology and Biotechnology
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• v.33 no.6
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• pp.760-770
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• 2023

Continuous cropping obstacles have become a serious factor restricting sustainable development in modern agriculture, while companion planting is one of the most common and effective methods for solving this problem. Here, we monitored the effects of companion planting on soil fertility and the microbial community distribution pattern in pepper monoculture and companion plantings. Soil microbial communities were analyzed using high-throughput sequencing technology. Companion plants included garlic (T1), oat (T2), cabbage (T3), celery (T4), and white clover (T5). The results showed that compared with the monoculture system, companion planting significantly increased the activities of soil urease (except for T5) and sucrase, but decreased catalase activity. In addition, T2 significantly improved microbial diversity (Shannon index) while T1 resulted in a decrease of bacterial OTUs and an increase of fungal OTUs. Companion planting also significantly changed soil microbial community structures and compositions. Correlation analysis showed that soil enzyme activities were closely correlated with bacterial and fungal community structures. Moreover, the companion system weakened the complexity of microbial networks. These findings indicated that companion plants can provide nutrition to microbes and weaken the competition among them, which offers a theoretical basis and data for further research into methods for reducing continuous cropping obstacles in agriculture.

• Korean Journal of Microbiology
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• v.10 no.4
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• pp.175-190
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• 1972

This work was designed to illustrate physiological effects on the elimination of sulfur and its compounds in petroleum using sulfur-reducing bacteria. Deulfurizing bacteria were collected from sewage and soil at several areas in Soul and Ulsan, Korea. Seven supecies of sulfur-reducing microbes isolated were identified as : Pseudomonas marginata, Ps.effusa, Ps. putrefaciens, Ps.pseudcmcnelli, Ps. xanthochlora, Ps.bowlesiae, and Ps.aeruginosa. And some experiments were performed to define the growing characteristics of the Pseudomonads and the results obtained are as follows : 1) Shaking culture method was more effective for the growth of the cells than stagnant culture. 2) Beef peptone medium was better for the growth than other media. 3) Cuprous chloride of 50 ppm and cupper sulfate of 300 ppm treated, respectively, in the medium were effective for the growth. 4) Benzene of toluene of 5,000 ppm and petroleum ether of 50,000 ppm did not show remarkable inhibitory effects on the growth.

• Proceedings of the KIEE Conference
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• 2000.07c
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• pp.2023-2025
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• 2000

Globally, movements for an environmental preservation have been further extended in all the areas of industries. In the manufacturing area. environment-friendly properties for all the manufactured products are increasingly required by many national standards. For EHV oil-filled cables. Hard Alkylbenzen has been applied as an impregnated insulating oil. But as it flows into the soil during failures, such as oil leakage, the oil is not dissolved by microbes and then causes an environmental pollution. Recently some countries are increasingly requiring Soft Alkylbenzen which is dissolved by microbes. This paper describes the electrical and environmental properties of Soft Alkylbenzen. applied for a 230kV oil-filled cables at a Singapore's project.

• Korean Journal of Soil Science and Fertilizer
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• v.45 no.6
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• pp.1073-1085
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• 2012

Soil microbial communities are immensely diverse and complex with respect to species richness and community size. These communities play essential roles in agricultural soil because they are responsible for most of the nutrient cycles in the soil and influence the plant diversity and productivity. However, the majority of these microbes remain uncharacterized because of poor culturability. Next-generation sequencing techniques have revolutionized many areas of biology by providing cheaper and faster alternatives to Sanger sequencing. Among them, amplicon pyrosequencing is a powerful tool developed by 454 Life Sciences for assessing the diversity of complex microbial communities by sequencing PCR products or amplicons. This review summarizes the current opinions in amplicon sequencing of soil microbial communities, and provides practical guidance and advice on sequence quality control, aligning, clustering, OTU- and taxon-based analysis. The last section of this article includes a few representative studies conducted using amplicon pyrosequencing.

• Korean Journal of Weed Science
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• v.14 no.4
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• pp.298-313
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• 1994

Residue of herbicide napropamide [N,N-dimethyl-2-(1-napthoxy)-propionamide] and change of micro-organism were investigated in upland soil under different environmental conditions. Half-lives of degradation were 28.3 days in the sterile soil and 14.6 days in the nonsterile soil, respectively. These results suggest that microorganism remarkably affected the decomposition of napropamide. Napropamide was rapidly degraded in order of 60% > 80% ${\geq}$ 40% soil moisture content of field water-holding capacity. Numbers of bacteria and total microbes in 60% moisture content was more than those in 40% moisture content. The more the napropamide degradation was rapid in lower soil pH. The total number of microorganism increased by lapse of time after treatment of napropamide at pH 5.5. The decomposition rate of napropamide was rapid in the order of $27^{\circ}C$ > $37^{\circ}C$ > $17^{\circ}C$. At $17^{\circ}C$ of soil temperature actinomycetes in napropamide treatment plot was more than these in nontreatment plot and also at $27^{\circ}C$ and $37^{\circ}C$ bacteria in napropamide treatment plot was more than those in nontreatment plot. Napropamide degradation was more rapid and number of microorganism was more abundant at the concentration of 10ppm than at that of 20ppm. The half-life of napropamide was longer in the clay loam soil than in the silty loam soil. The half times in laboratory test than in upland field. Numbers of microbes in the experiment under all the test environmental condition was not significantly different between treatment and nontreatment of napropamide.

• Korean Journal of Soil Science and Fertilizer
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• v.33 no.4
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• pp.266-274
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• 2000

Understanding of microbial community structure in soil-root system is necessary to use beneficial soil and rhizosphere microbes for improvement of crop production and biocontrol. The knowledge of behavior and function of microbes in soil-root system plays a key role for the application of beneficial inocula. Because the majority of the intact bacteria in soil are unable to grow on nutrient media, both culturable and nonculturable bacteria have to be studied together. In our study, culture-independent survey of bacterial community in the soil-root system of red pepper fields was conducted by the sequence analysis of three universal clone libraries of genes which code for small-subunit rRNA (rDNA). Universal small subunit rRNA primers were used to amplify DNA extracted from each sample and PCR products were cloned into pGEM-T. Out of 27 clones sequenced, 25 clones were from domain bacteria. Two of the rDNA sequences were derived from eukaryotic organelles. Within the domain bacteria, several kingdoms were represented : the Proteobacteria (16 clones). Cytophyga-Flexibacter-Bacteroides group (2 clones). the high G+C content gram-positive group(1 clone) and 4 unknown clones.