• Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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• 1998.11a
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• pp.178-182
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• 1998

Bioremediation techniques have proved to be effective for restoring petroleum-contaminated soils. however some limitations still exist, especially biodegradation of hydrophobic organic compounds(HOCs) in soil is limited by their low solubility and sorption to solid surfaces. The principal objective of this study was to evaluate the effectiveness of biosurfactant sophorolipid on the biodegradation of hydrocarbons in soil. Experimental results showed that sophorolipid was not toxic to the HOC-degrading bacteria and enhanced biodegradation of HOCs in soil better than synthetic surfactants. when these models were treated with 1000mg/soil kg sophorolipid.

• Journal of Microbiology and Biotechnology
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• v.24 no.12
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• pp.1699-1706
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• 2014

A lichenase gene (mt-lic) was identified for the first time through function-based screening of a soil metagenomic library. Its deduced amino acid sequence exhibited a high degree of homology with endo-${\beta}$-1,3-1,4-glucanase (having both lichenase and chitosanase activities), encoded by the bgc gene of Bacillus circulans WL-12. The recombinant lichenase overexpressed and purified from Escherichia coli was able to efficiently hydrolyze both barley ${\beta}$-glucan and lichenan. The enzyme showed maximal activity at a pH of 6.0 at $50^{\circ}C$, with Azo-barley-glucan as the substrate. The metal ions $Mn^{2+}$, $Mg^{2+}$, $Ca^{2+}$, and $Fe^{2+}$ enhanced the enzymatic activity, whereas the $Cu^{2+}$ and $Zn^{2+}$ ions inhibited the enzymatic activity. The $K_m$ and $V_{max}$ values of the purified lichenase were determined to be 0.45 mg/ml and 24.83 U/min/mg of protein, respectively.

• 한국생물공학회:학술대회논문집
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• 2000.04a
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• pp.418-421
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• 2000

A model was developed to describe the microbial decontamination of diesel contaminated soil in a soil column. The biodegradation rate of diesel in nature depends on temperature and the pH of soil, availability of nutrients, oxygen and water. The soil moisture content is one of the essential factors because it characterizes the availability not only of water to microorganisms but also of oxygen and nutrient dissolved in soil. In this work, the rate of biodegradation was modeled by coupling Michaelis-Menten kinetics for the aqueous-phase solute with adsoption-desoption equation for diesel sorption and desorption from soil.

• KSBB Journal
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• v.28 no.5
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• pp.275-281
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• 2013

Soil microbial community analysis of farmland soil sprayed with lye in order to use fertilizer in Nigeria was performed. As a control, two kinds of soils not sprayed with lye, located in Eungo and Lagos with general practice in agriculture was selected. Soil sprayed with lye was pH 8.25 through alkalization reaction, while the other soil samples were pH 6.22 and 5.94. Substrate utilization and species diversity index of soil sprayed with lye were low than that of the other soils with the analysis of Biolog ecoplate. As a result of principal component analysis, the relationship between three samples was low. Microbial community analysis was performed by DGGE and most of them were soil uncultured bacterium. Especially, Uncultured Acidobacteria and Uncultured Methylocystis sp., which had been isolated from the rhizosphere of soybean grown in that site were discovered in the soil sprayed with lye.

• 한국생물공학회:학술대회논문집
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• 2003.10a
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• pp.389-389
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• 2003

• Journal of Forest and Environmental Science
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• v.24 no.2
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• pp.111-118
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• 2008

Pull-out resistance tests of root were carried out for 7 shrub species which are mainly used greening of deteriorated forest slope. Mean pull-out resistance forces of Aralia elata, Salix koreensis and Stephanandra incisa were 37.26 kgf, 34.56 kgf and 26.00 kgf, respectively. The pull-out resistances were high as collar diameter and volume of the root increased. Correlations between root collar diameter and root volume were high in Rubus crataegifolius, but on the other hand, the correlation was lowest in Zanthoxylum schinifolium. There were significant differences in pull-out resistance by root collar diameters, and the difference of pull-out resistance by species showed only below 20 ml root volume.

• Journal of Microbiology and Biotechnology
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• v.32 no.2
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• pp.176-186
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• 2022

Continued fenvalerate use has caused serious environmental pollution and requires large-scale remediation. Dibutyl phthalate (DBP) was discovered in fenvalerate metabolites degraded by Citrobacter freundii CD-9. Coculturing is an effective method for bioremediation, but few studies have analyzed the degradation pathways and potential mechanisms of cocultures. Here, a DBP-degrading strain (BDBP 071) was isolated from soil contaminated with pyrethroid pesticides (PPs) and identified as Stenotrophomonas acidaminiphila. The optimum conditions for DBP degradation were determined by response surface methodology (RSM) analysis to be 30.9 mg/l DBP concentration, pH 7.5, at a culture temperature of 37.2℃. Under the optimized conditions, approximately 88% of DBP was degraded within 48 h and five metabolites were detected. Coculturing C. freundii CD-9 and S. acidaminiphila BDBP 071 promoted fenvalerate degradation. When CD-9 was cultured for 16 h before adding BDBP 071, the strain inoculation ratio was 5:5 (v/v), fenvalerate concentration was 75.0 mg/l, fenvalerate was degraded to 84.37 ± 1.25%, and DBP level was reduced by 5.21 mg/l. In addition, 12 fenvalerate metabolites were identified and a pathway for fenvalerate degradation by the cocultured strains was proposed. These results provide theoretical data for further exploration of the mechanisms used by this coculture system to degrade fenvalerate and DBP, and also offer a promising method for effective bioremediation of PPs and their related metabolites in polluted environments.

• KSBB Journal
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• v.4 no.1
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• pp.8-10
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• 1989

Mutagenic characteristics deactivation of 7, 12-dimethylbenz(a)anthraracene was studied in a nonacclimated sandy loam soil at low and neutral pH soil conditions. Soil extracts containing transformation products were separated into three fractions based on HPLC retention time(polarity). Highly polar transformation products of 7, 12-dimethylbenz(a)anthracene demonstrated a negative mutagenic response with the Ames mutagenicity assay, strain TA-100, for both low and neutral pH soils. Moderate and low polar fractions, however, induced mutagenicity for both soil samples with mutagenic ratios similar to those of the parent compound.

• Journal of Microbiology and Biotechnology
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• v.14 no.2
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• pp.337-343
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• 2004

A bacterial strain concurrently producing extracellular chitosanase and chitinase was isolated from soil and identified as a member of the $\beta$-subgroup of Proteobacteria through its 16S rRNA analysis and some biochemical analyses. The newly discovered strain, named as KNU3, had 99% homology of its 16S rRNA sequence with chitinolytic $\beta$-Proteobacterium CTE108. Strain KNU3 produced 34 kDa of chitosanase in addition to two chitinases of 68 kDa and 30 kDa, respectively. The purified chitosanase protein (ChoK) showed activity toward soluble, colloidal, and glycol chitosan, but did not exhibit any activity toward colloidal chitin. The optimum pH and temperature of ChoK were 6.0 and $70^{\circ}C$, respectively. The chitosanase was stable in the pH 4.0 to 8.0 range at $70^{\circ}C$, while enzyme activity was relatively stable at below $45^{\circ}C$. MALDI-TOF MS and N-terminal amino acid sequence analyses indicated that ChoK protein is related to chitosanases from Matsuebacter sp. and Sphingobacterium multivorum. HPLC analysis of chitosan lysates revealed that glucosamine tetramers and hexamers were the major products of hydrolysis.

• 한국생물공학회:학술대회논문집
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• 2004.07a
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• pp.107-125
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• 2004

A bioremediation of petroleum-contaminated soil in Korea was evaluated for the optimization of enhanced biodegradation and the minimization of effects of seasonal variations, The short-term bioremediation in combination of biopile pretreatment and landfarming was performed by lowering contaminated levels and overcoming the inhibiting factors in the rainy and winter seasons. A microbial density was maintained with indigenous microbial addition for bioaugmentation and with fertilizers for biostimulation. A lesser volatile and biodegradable fraction due to their abiotic removals following the biopile pretreatment was effectively removed by the laterally applied landfarming. The optimal temperature in greenhouse was maintained by buffering of the soil temperature even with slight decreases in removal rates during the winter and extensive leaching of nutrients and contaminants was restricted with adjusting the water contents during the Korean rainy season. Although the tilling process was effective for biodegradation with aeration only, the simultaneous treatment due to apparent mixing of nutrients and microbes more favorably degraded the petroleum than the sequential treatment.