• Title/Summary/Keyword: Shannon-Weaver index (H')

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Evaluation of Biodiversity Based on Changes of Spatial Scale -A Case Study of Baekdudaegan Area in Kangwondo- (공간스케일 변화에 따른 생물다양성 평가 -강원도 백두대간 보호구역을 대상으로-)

  • Sim, Woodam;Park, Jinwoo;Lee, Jungsoo
    • Journal of Forest and Environmental Science
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    • v.30 no.1
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    • pp.91-100
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    • 2014
  • This research was conducted on the conservation area of Baekdudaegan, Kangwondo under the purpose of evaluating bio-diversity according to the changes of spatial scale, using GIS data and spatial filtering method. The diversity index was calculated based on the information of species of The $5^{th}$ forest type map using Shannon-weaver index (H'), evenness index ($E_i$) and richness index ($R_i$). The diversity index was analyzed and compared according to the changes of 12 spatial scales from Kernel size $3{\times}3$ to $73{\times}73$ and basin unit. As for H' and $R_i$, spatial scale increased as diversity index decreased, while $E_i$ decreases gradually. H' and $R_i$ was highest; each 1.1 and 0.6, when the Kernel size was $73{\times}73$, while $E_i$ was 0.2, the lowest. When you look at according to the basin unit, for large basin unit, 'YeongDong' region shows higher diversity index than 'YeongSeo' region. For middle basin unit, 'Gangneung Namdaecheon' region, and for small basin unit, 'Gangneung Namdaecheon' and 'Gangneung Ohbongdaem' region shows high diversity index. When you look at the relationship between diversity index and Geographic factors, H' shows positive relation to curvature and sunshine factor while shows negative to elevation, slope, hillshade, and wetness index. Also $E_i$ was similar to the relationship between H' and Geographic factor. Meanwhile, $R_i$ shows positive relationship to curvature and sunshine factor, while negative to elevation, slope, hillshade, and wetness index. macro unit diversity index evaluation was possible through the GIS data and spatial filtering, and it can be a good source for local biosphere conservation policy making.

Species Composition of Benthic Macroinvertebrates and Water Evaluation Using Their Species in the Songji River in Korea (한국 송지천에서 저서성대형무척추동물의 종조성과 이를 이용한 수질 평가)

  • Lee, Byeong Ryong;Huh, Man Kyu
    • Journal of Life Science
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    • v.29 no.5
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    • pp.580-587
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    • 2019
  • Benthic macroinvertebrates were analyzed in March, June, September, and December 2018 to evaluate water quality in the Songji River in Sacheon-ci, Korea. The identified benthic macroinvertebrates included 447 individuals belonging to 20 species, 18 families, 12 orders, 5 classes, and 3 phyla. Various ecological parameters were estimated for evaluation of the river status. The total ecological score of benthic macroinvertebrate community (TESB) varied from 17 (Station D) to 41 (Station A). The saprobic index and ecological score of benthic macroinvertebrate community (ESB) for the evaluation of river status revealed a water quality evaluation at Station A of II (oligosaprobic), indicating some satisfactory water protection. The benthic macroinvertebrate index (BMI) varied from 25.207 (Site C) to 39.348 (Station A). The evaluation of the river status at Stations C and D was polysaprobic, and sensitive taxa were absent. The mean Shannon-Weaver index (H') of diversity varied from 1.288 (Station D) to 2.250 (Station A). The classification of saprobity based on H' was ${\beta}$-mesosaprobic at Station A and ${\alpha}$-mesosaprobic at the other stations. The value of geometric density was varied from 1.229 (Station A) to 2.071 (Station D), with a mean of 1.582. An artificial load is being added to this river. One of load is the rectal river construction which flows straight through the river physics. Thus, the environment of living organisms deteriorates due to insufficient water. In order to secure the quality of the Songji River and a good environmental habitat, several low-height stepped-beam structures are required.

Fauna Diversity at the Deukjin River, Hapcheon-gun, Korea (합천군 덕진천의 동물상에 대한 다양성)

  • Huh, Man Kyu
    • Journal of Life Science
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    • v.28 no.1
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    • pp.105-109
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    • 2018
  • Biodiversity (or biological diversity) is defined as the variability of living organisms, the "diversity of life on Earth," and the complex relationships that make up ecosystems. This study aimed to investigate the spatial and temporal patterns in animal species composition and diversity at the Deukjin River, located in Hapcheon Province, Korea. The fauna community at the Deukjin River during 2016 season was identified with a total of 55 taxa, representing the following six classes: Mammalia (mammals), Actinopterygii (bony fish), Chondrichthyes (cartilaginous fish), Aves (birds), Amphibia (amphibians), Reptilia (reptiles), and invertebrates. The Berger - Parker index (BPI) for mammals varied from 0.233 (Station A) to 0.333 (Station D). The Shannon - Weaver index (H') and two diversity indexes (N1 and N2) for mammals and birds in the upper region were higher than those in the lower region. The values of ${\beta}$-diversity for animals varied from 0.229 for fish to 0.339 for invertebrates. The richness indices for animal taxa also varied among the stations and seasons. Station A showed considerably high richness in mammals, birds, and reptiles/amphibians. Although the richness indices (R1 and R2) for six animal kingdoms during the seasons were different from each other, the difference was not significant (p<0.05). The evenness indices for five animal kingdoms were different from each other, but again, the difference was not significant (p<0.05).

Status, Distribution, Conservation and Use Value of Medicinal and Aromatic Plants (MAPs) in Sagarmatha National Park, Nepal

  • Gaire, Damodar
    • Journal of Forest and Environmental Science
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    • v.30 no.3
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    • pp.253-258
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    • 2014
  • The study attempts to assess the status, distribution, conservation and use value of Medicinal and Aromatic Plant (MAPs) in the Sagarmatha National Park. Altogether 62 species of MAPs belonging to 47 genera and 33 families have been recorded in the study area. 10 species, belonging to 9 families are categorized as the potential species. Out of the these species, most potential in local but threatened species are Allium hypsistum Stearn, Cordyceps sinensis Sacc, Dactylorhiza hatagirea Soo, Nardostachys grandiflora DC, Aconitum orochryseum, Ephedra gerardiana Wall. Ex. Stapf, Swertia multicaulis D. Don, Picrorhiza scrophulariflora Penne, Rheum australe. D. Don, Malva verticillataL and Swertia pedicallata Benerji. By analysis of data using Simpson's diversity index (SI) and Shannon weaver function (H'), there was high diversity (more heterogeneous) MAPs species composition in the Manjo Gate to Large Dobhan. (0.98349). Less diversity (less heterogeneous) MAPs species composition was in Tyanboche to Pangoche (0.90419). Similarly, the Shannon weaver function shows that in plots laying out in Mongla to Phorche are evenly distributed than others However, higher MAPs species (i.e., 31) was found in the way of Manjo Gate to Larja Dobhan than others.

FAME Analysis to Monitor Impact of Organic Matter on Soil Bacterial Populations

  • Kim, Jong-Shik;Joo, Jin-Bee;Weon, Hang-Yeon;Kang, Chang-Seong;Lee, Si-Kyung;Yahng, Chahng-Sool
    • Journal of Microbiology and Biotechnology
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    • v.12 no.3
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    • pp.382-388
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    • 2002
  • In order to assess the effects of organic fertilizer on soil microbial community structure and diversity in the greenhouse fields, fatty acid methyl ester (FAME) was analyzed by the MIDI (Microbial ID, Inc., Newark, DE, U.S.A.) system and enumerations were performed. In relation to bacterial division of each sample, low GC Gram-positive bacteria were predominant among bacteria cultured on aerobic bacteria media. On the other hand, alpha subdivision was predominant on proteobacteria of control and OM (organic matter) 1 treated plot, and Flavobacterium spp. existed in OM2 plot on crystal violet media of all samples. Shannon-weaver Index (H) of OM1 plot varied most by 1.9 and 5.0 among bacteria cultured on aerobic bacteria media and crystal violet media, respectively. Our results revealed that addition of the organic wastes to soil led to a highly diverse microbial community, but the excessive amounts of organic and mineral fertilizer applied in the greenhouse fields produced excess nutrients in soil and led to simplification on bacterial populations.

Monitoring of Microbial Diversity and Activity During Bioremediation of Crude Oil-Contaminated Soil with Different Treatments

  • Baek, Kyung-Hwa;Yoon, Byung-Dae;Kim, Byung-Hyuk;Cho, Dae-Hyun;Lee, In-Sook;Oh, Hee-Mock;Kim, Hee-Sik
    • Journal of Microbiology and Biotechnology
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    • v.17 no.1
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    • pp.67-73
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    • 2007
  • The present study compared the microbial diversity and activity during the application of various bioremediation processes to crude oil-contaminated soil. Five different treatments, including natural attenuation (NA), biostimulation (BS), biosurfactant addition (BE), bioaugmentation (BA), and a combined treatment (CT) of biostimulation, biosurfactant addition, and bioaugmentation, were used to analyze the degradation rate and microbial communities. After 120 days, the level of remaining hydrocarbons after all the treatments was similar, however, the highest rate (k) of total petroleum hydrocarbon (TPH) degradation was observed with the CT treatment (P<0.05). The total bacterial counts increased during the first 2 weeks with all the treatments, and then remained stable. The bacterial communities and alkane monooxygenase gene fragment, alkB, were compared by denaturing gradient gel electrophoresis (DGGE). The DGGE analyses of the BA and CT treatments, which included Nocardia sp. H17-1, revealed a simple dominant population structure, compared with the other treatments. The Shannon-Weaver diversity index (H') and Simpson dominance index (D), calculated from the DGGE profiles using 16S rDNA, showed considerable qualitative differences in the community structure before and after the bioremediation treatment as well as between treatment conditions.

Fish Community Structure Analysis and Ecological Health Assessments in the Headwater Watershed of Nakdong River (낙동강 상류 수계의 어류 군집 구조 분석 및 생태건강도 평가)

  • Lee, Jae-Hoon;Hong, Young-Pyo;An, Kwang-Guk
    • Korean Journal of Ecology and Environment
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    • v.40 no.3
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    • pp.403-411
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    • 2007
  • The purpose of the study was to evaluate fish community, based on conventional at Shannon-Weaver diversity index (H'), and ecological health, based on the Index of Biological Integrity (IBI) using fish assemblage in the eight sites of Nakdong River during June${\sim}$August 1999. Total number of species sampled was 19 species, and two sensitive species of Zacco temminckii (51%) and Rhynchocypris oxycephalus (28%) dominated the fish community. Also, trophic guild analyses showed that insectivore was 87% of the total and omnivore was rare, indicating that the ecological health is well maintained in the system. The pattern of spatial variation in the diversity index(H') was very similar to patterns of the species number and individual number, whereas the pattern of H' was not matched with the tolerance and trophic guild data. The diversity index (H') showed highest (1.56) in Site 6 where the proportion of sensitive species and tolerant species was minimum and maximum, respectively, and where the insectivore and omnivore were minimum and maximum. In other words, the diversity index was not matched at all with the trophic and tolerant guilds, indicating that the conventional index did not reflect the ecological characteristics of fish community in the system. In the mean time, the ecological health (IBI) averaged 33.5 (n=8), indicating "good${\sim}$fair condition" and the IBI values matched with trophic and tolerance guilds. Maximum IBI occurred in Site 2 where the sensitive and msectivore species were nearly maximum, and the tolerant and omnivore species were almost minima, indicating that IBI values were closely associated with the ecological functions and health conditions. Overall data suggest that the conventional diversity index may not effective for a evaluation of fish community, and that in contrast the IBI approach may be a useful tool for diagnosis of stream community.