• Title/Summary/Keyword: Shannon diversity index

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A Study on Vegetation Structure Changes between Natural land and Damaged land in Regional Ecological Network at Chungnam Province (충남 광역생태네트워크 자연녹지의 훼손지 식생구조 변화)

  • Song, Ju-Hyeon;Yun, Chung-Weon;Cho, Yong-Hyeon;Kang, Hee-Kyoung
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.20 no.2
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    • pp.13-35
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    • 2017
  • This study was carried out to analyze vegetation structure and change of the disturbed area in forest ecosystem(FE), riparian ecosystem(RE) and coastal ecosystem(CE) related to Regional Ecological Network at Chungnam province through constancy and dominance analysis, species diversity index, similarity index and canonical correlation analysis. Data were collected from April to October in 2015. As a result of constancy and dominance analysis of forest disturbed area, non-effective species(NES) was 30 species(17.0%), exported species(ES) was 98 species(55.7%) and imported species(IS) was 48 species(27.3%) among the total 176 species, respectively. In riparian disturbed area with total 139 species, there were 16 NES(11.5%), 98 ES(70.5%) and 25 IS(18.0%) respectively. In coastal disturbed area with 140 species, there were 20 NES(14.3%), 88 ES(62.9%) and 32 IS(22.9%) respectively. In all types of disturbed areas, the ratio of ES was higher than IS. As a result of species diversity, species richness and shannon's diversity index of disturbed area decreased in all kinds of crown strata such as tree, subtree, shrub and herb layer compared to the control area. As a result of similarity index, that of each type between control site and disturbed site was 0.374 in FE, 0.329 in CE and 0.259 in RE in the order. As a result of the CCA analysis, the number of present species, vine plants ratio and exported species ratio in disturbed area of FE and RE were decreased, and the naturalized plant ratio, imported species ratio and herb ratio were increased. But environmental factors of CE were not shown any clear tendency. In conclusion, many species occupied in control site disappeared into the disturbed area, and the naturalized plants and herb species were abundantly imported in the area. Therefore, it was considered that this study could be applied to the development of long-term and short-term ecological restoration techniques in view of vegetation changes.

Application of Forest Bird Naturalness Index for Evaluating Biodiversity in National Parks in Korea (국립공원 생물다양성 평가를 위한 산림성 조류 자연성 지수 적용)

  • Choi, Sei-Woong;Jang, Jin;Chae, Hee-Young;Park, Jin-Young
    • Korean Journal of Ecology and Environment
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    • v.54 no.2
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    • pp.108-119
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    • 2021
  • We aimed to develop a naturalness index for forest-dwelling birds in four national parks in Korea and to simulate the effect of species loss on this naturalness index. Five bird specialists were asked to give 112 bird species a disturbance susceptibility score (DSS), and the naturalness index was calculated based on this. The 112 bird species represented 8 orders (Cuculiformes, Piciformes, Accipitriformes, Falconiformes, Columbiformes, Caprimulgiformes, Strigiformes, and Passeriformes). DSS was the highest for Terpsiphone atrocaudata and Pitta nympha, and lowest for Pica pica, Hypsipetes amaurotis, and Streptopelia orientalis. There was a significant negative relationship between a species' population number and its DSS. Among the four national parks, Mt. Songni had the highest naturalness index, followed by Mt. Wolak, Mt. Juwang, and Mt. Wolchul. We investigated the change in biodiversity indices under four scenarios, which assumed the extinction of species with less than 5 (Scenario 1), 10 (Scenario 2), 50 (Scenario 3), and 100 individuals (Scenario 4). The results showed that although all biodiversity indices decreased as the species loss increased, they all behaved differently. Fisher's alpha diversity decreased as the number of species proportionally decreased. There was almost no change in Shannon-Wiener H' index in Scenarios 1 and 2. The naturalness index showed increased sensitivity in Scenarios 1 and 4. Our future aims are to obtain the DSS for all forest-dwelling bird species, and to adopt the naturalness index to evaluate temporal and spatial changes in biodiversity.

Distribution of Carabid Beetles(Coleoptera: Carabidae) in different forests of Central Kangwon-do (강원 중부지역 산림내의 딱정벌레과(科) 분포에 관한 연구)

  • Chang, Suk-Jun;Kim, Jong-Kuk
    • Journal of Forest and Environmental Science
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    • v.16 no.1
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    • pp.42-49
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    • 2000
  • This study deals with the structure of Carabid beetle community surveyed in different stands. Species richness and abundance of Carabid beetles were 1,162 individuals, 23 species, 10 genera in the Pinus densiflora stand, 418 individuals, 23 species, 11 genera in the Pinus koraiensis stand, 782 individuals, 25 species, 11 genera in the Larix leptolepis stand, 1,383 individuals 25 species, 12 genera in the Quercus variabilis stand. Dominant species were Synuchus cycloderus(19.8%), Synuchus nitidus(16.6%), Pterostichus pertirax(16.2%) in the Pinus densiflora stand. Pterostichus sp.1(27.9%), Synuchus nitidus(24.4%), Synuchus cycloderus(10.2%) in the Pinus koraiensis stand, Synuchus sp.1(40.0%), Synuchus nitidus(9.3), Pterostichus sp.1(7.4%) in the Larix leptoepis stand. Pterostichus sp.2(17.4%), Synuchus cycloderus(14.4%). Pterostichus pertirax(14.1%) in the Quercus variabili stand. Shannon species diversity index(H') in the Pinus densiflora, Pinus koraiensis, Larix leptolepis and Quercus variabilis stand were 2.11, 2.25, 2.23 and 2.32 respectively and Evenness index(J') were 0.64, 0.72, 0.69 and 0.72, respectively. Community similarity index showed the lowest value (0.66) between Quercus variabilis stand and Pinus koraiensis stand and the highest value (0.83) between Pinus densiflora stand and Larix leptolepis stand.

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Effects of dietary fiber levels on cecal microbiota composition in geese

  • Li, Yanpin;Yang, Haiming;Xu, Lei;Wang, Zhiyue;Zhao, Yue;Chen, Xiaoshuai
    • Asian-Australasian Journal of Animal Sciences
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    • v.31 no.8
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    • pp.1285-1290
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    • 2018
  • Objective: This study shows the effects of dietary fiber levels on cecal microbiota composition in geese at day 70 according to pyrosequencing of the 16S ribosomal RNA gene. Methods: A total of 468 1-day-old healthy male Yangzhou goslings with similar body weight were randomly divided into 3 groups with 6 replicates per group and 26 geese per replicate. Geese were fed diets with fiber levels of 2.5% (low fiber level diet, Group I) and 6.1% (Group III) during days 1-70, respectively, or 4.3% for days 1-28 and 6.1% for days 29-70 (Group II). Results: Low fiber level diet decreased body weight, average daily gain during, increased lower feed conversation rate of geese during day 1 to 70 (p<0.05). Low fiber level diet decreased the total operational taxonomic units, Chao1 index and Shannon index, whereas increased the Simpson index of cecal microbiota in geese at day 70. Low fiber level diet decreased the relative abundance of Bacteroidetes, Firmicutes, Bacteroides, and Paraprevotella in cecum of geese at day 70. The similarity of cecal microbiota between low fiber level diet group and other groups was smaller. Conclusion: This study indicates that the low fiber level diet decreased diversity of microbiota, and relative abundance of some beneficial microbiota in cecum of geese at day 70, implying that the low fiber level diet has negative influence on performance by altering the diversity and population of cecal microbiota in geese.

FAME Analysis to Monitor Impact of Organic Matter on Soil Bacterial Populations

  • Kim, Jong-Shik;Joo, Jin-Bee;Weon, Hang-Yeon;Kang, Chang-Seong;Lee, Si-Kyung;Yahng, Chahng-Sool
    • Journal of Microbiology and Biotechnology
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    • v.12 no.3
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    • pp.382-388
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    • 2002
  • In order to assess the effects of organic fertilizer on soil microbial community structure and diversity in the greenhouse fields, fatty acid methyl ester (FAME) was analyzed by the MIDI (Microbial ID, Inc., Newark, DE, U.S.A.) system and enumerations were performed. In relation to bacterial division of each sample, low GC Gram-positive bacteria were predominant among bacteria cultured on aerobic bacteria media. On the other hand, alpha subdivision was predominant on proteobacteria of control and OM (organic matter) 1 treated plot, and Flavobacterium spp. existed in OM2 plot on crystal violet media of all samples. Shannon-weaver Index (H) of OM1 plot varied most by 1.9 and 5.0 among bacteria cultured on aerobic bacteria media and crystal violet media, respectively. Our results revealed that addition of the organic wastes to soil led to a highly diverse microbial community, but the excessive amounts of organic and mineral fertilizer applied in the greenhouse fields produced excess nutrients in soil and led to simplification on bacterial populations.

Ecological characteristics of areas naturally inhabited by Dolbae trees(Pyrus pyrifolia) on Mt. Kaya

  • Ahn, Young-Hee;Chung, Kyu-Hwan
    • Journal of Environmental Science International
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    • v.11 no.11
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    • pp.1149-1156
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    • 2002
  • The ecological characteristics of Dolbae trees, a valuable genetic resource for native pyrus fruit trees, were investigated at four naturally inhabited areas on Mount Kaya, Gyeongsangnam-Do. Most Dolbae trees were found on the southwest side of an old hiking path to a mountain valley at altitudes of 610∼670 m. The surrounding flora consisted of 46 families, 69 genera, 75 species, and 10 varieties. The natural habitat of the Dolbae trees was basically a deciduous broad-leaved forest with a predominance of Quercus serrata and ligneous plants(xylophytes) from the Fagaceae and Betulaceae families. The habitat was also found to be in a second transition resulting from forest disturbance and exhibited a degree of diversity of 2.901-5.065, based on Shannon-Weiner's index. Examination of the Dolbae trees found in Mount Kaya revealed diameter breast heights(DBHs) ranging from 10 to 60 cm, including six old and large Dolbae trees with a DBH of 50∼60 cm, which will be particularly valuable as a genetic resource. Accordingly, the current results suggest that the study areas are a secondary forest in a typical mid-temperate zone resulting from forest damage about 10 years earlier.

Influence of Companion Planting on Microbial Compositions and Their Symbiotic Network in Pepper Continuous Cropping Soil

  • Jingxia Gao;Fengbao Zhang
    • Journal of Microbiology and Biotechnology
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    • v.33 no.6
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    • pp.760-770
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    • 2023
  • Continuous cropping obstacles have become a serious factor restricting sustainable development in modern agriculture, while companion planting is one of the most common and effective methods for solving this problem. Here, we monitored the effects of companion planting on soil fertility and the microbial community distribution pattern in pepper monoculture and companion plantings. Soil microbial communities were analyzed using high-throughput sequencing technology. Companion plants included garlic (T1), oat (T2), cabbage (T3), celery (T4), and white clover (T5). The results showed that compared with the monoculture system, companion planting significantly increased the activities of soil urease (except for T5) and sucrase, but decreased catalase activity. In addition, T2 significantly improved microbial diversity (Shannon index) while T1 resulted in a decrease of bacterial OTUs and an increase of fungal OTUs. Companion planting also significantly changed soil microbial community structures and compositions. Correlation analysis showed that soil enzyme activities were closely correlated with bacterial and fungal community structures. Moreover, the companion system weakened the complexity of microbial networks. These findings indicated that companion plants can provide nutrition to microbes and weaken the competition among them, which offers a theoretical basis and data for further research into methods for reducing continuous cropping obstacles in agriculture.

Animal Production and Phytodiversity in Semi-natural Grasslands of the Aso Region, Japan

  • Okamoto, Chinobu;Kabata, Kiyotaka
    • The Korean Journal of Ecology
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    • v.27 no.4
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    • pp.239-244
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    • 2004
  • In this review, we present the results of our ten years of study on beef cattle production as a means of preserving phytodiversity and landscape in the semi-natural grasslands of the Aso region of Japan. There are about 16,000 ha of semi-natural grasslands in the region. The grasslands are maintained for animal production through such activities as grazing, mowing, and controlled burning. The Shannon's diversity index values, as measured in the present study, were higher in the grazed sites than in the abandoned sites. The grazing activities thus seem to create suitable habitats for coexisting herbaceous species. The grassland grazed moderately over a long term was able to sustain more animals than the grassland unused over a long term.

Phytoplankton of the Coastal Waters of Vladivostok (the North-western Part of the East Sea) under Eutrophic Conditions

  • Stonik, I.V.;Orlova, T.Yu.
    • Ocean and Polar Research
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    • v.24 no.4
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    • pp.359-365
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    • 2002
  • The qualitative and quantitative composition of the phytoplankton of the coastal waters off Vladivostok during the period 1991-1994 was studied. The following trends in the phytoplankton composition with decreasing distance from the source of eutrophication were revealed: 1) total density and bio-mass increased; 2) the density of the diatom Skeletonema costatum, which reflects a decrease in the Shannon-Weaver species diversity index during the summer microalgal bloom, increased significantly; and 3) the density of the non-diatom component of the phytoplankton increased.

Analysis of Plant Species Community within Upland Wetlands at Mt. Ilgwang

  • Huh, Man-Kyu
    • Journal of Environmental Science International
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    • v.20 no.4
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    • pp.427-434
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    • 2011
  • This study characterized the full range of vegetation in a upland wetland (marshland) in Korea. Classified community types were used to describe vegetation at the marshland and adjacent areas. The communities contained 44 species of vascular plants and all species were identified into four plant community types. The Rhododendron yedoense f. poukhanense type and Lespedeza cyrtobotrya type had a high representation infacultative upland species (FU) and obligate upland species (OU), respectively. The monocot type was dominant in marshland by Miscanthuns saccharifloruc and contained 14 species. Together the three areas contained four species, with the strongest indicator species being Ranunculus acris var. nipponicus, Rhododendron yedoense f. poukhanense, Hemerocallis fulva, and Miscanthuns sinensis var. purpurascens. Shannon-Weaver index of diversity also varied among the community types (F = 18.9, df = 2), with the types FU having significantly higher value (3.467) than the others (1.125 for type FW and 1.239 for type OU).