• Title/Summary/Keyword: Set time

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Discovery of a new primer set for detection and quantification of Ilyonectria mors-panacis in soils for ginseng cultivation

  • Farh, Mohamed El-Agamy;Han, Jeong A.;Kim, Yeon-Ju;Kim, Jae Chun;Singh, Priyanka;Yang, Deok-Chun
    • Journal of Ginseng Research
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    • v.43 no.1
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    • pp.1-9
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    • 2019
  • Background: Korean ginseng is an important cash crop in Asian countries. However, plant yield is reduced by pathogens. Among the Ilyonectria radicicola-species complex, I. mors-panacis is responsible for root-rot and replant failure of ginseng in Asia. The development of new methods to reveal the existence of the pathogen before cultivation is started is essential. Therefore, a quantitative real-time polymerase chain reaction method was developed to detect and quantify the pathogen in ginseng soils. Methods: In this study, a species-specific histone H3 primer set was developed for the quantification of I. mors-panacis. The primer set was used on DNA from other microbes to evaluate its sensitivity and selectivity for I. mors-panacis DNA. Sterilized soil samples artificially infected with the pathogen at different concentrations were used to evaluate the ability of the primer set to detect the pathogen population in the soil DNA. Finally, the pathogen was quantified in many natural soil samples. Results: The designed primer set was found to be sensitive and selective for I. mors-panacis DNA. In artificially infected sterilized soil samples, using quantitative real-time polymerase chain reaction the estimated amount of template was positively correlated with the pathogen concentration in soil samples ($R^2=0.95$), disease severity index ($R^2=0.99$), and colony-forming units ($R^2=0.87$). In natural soils, the pathogen was recorded in most fields producing bad yields at a range of $5.82{\pm}2.35pg/g$ to $892.34{\pm}103.70pg/g$ of soil. Conclusion: According to these results, the proposed primer set is applicable for estimating soil quality before ginseng cultivation. This will contribute to disease management and crop protection in the future.

Time Complexity Analysis of SPIHT(Set Partitioning in Hierarchy Trees) Image Coding Algorithm (SPIHT 영상코딩 알고리즘의 시간복잡도 해석)

  • 박영석
    • Journal of the Institute of Convergence Signal Processing
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    • v.4 no.1
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    • pp.36-40
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    • 2003
  • A number of embedded wavelet image coding methods have been Proposed since the introduction of EZW(Embedded Zerotree Wavelet) algorithm. A common characteristic of these methods is that they use fundamental ideas found in the EZW algorithm. Especially, one of these methods is the SPIHT(Set Partitioning in Hierarchy Trees) algorithm, which became very popular since it was able to achieve equal or better performance than EZW without having to use an arithmetic encoder. The SPIHT algorithm is computationally very simple, but even so it provides excellent numerical and visual results. But the evaluation of its time complexity is no more than the relative result of experimental comparisons and the strict time complexity analysis wasn't taken until now. In this paper, we analyze strictly the processing time complexity of SPIHT algorithm and prove that the time complexity for one bit-plane processing is O( nlog $_2$n) in worst case.

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Rule-based Normalization of Relative Temporal Information

  • Jeong, Young-Seob;Lim, Chaegyun;Lee, SeungDong;Mswahili, Medard Edmund;Ndomba, Goodwill Erasmo;Choi, Ho-Jin
    • Journal of the Korea Society of Computer and Information
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    • v.27 no.12
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    • pp.41-49
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    • 2022
  • Documents often contain relative time expressions, and it is important to define a schema of the relative time information and develop a system that extracts such information from corpus. In this study, to deal with the relative time expressions, we propose seven additional attributes of timex3: year, month, day, week, hour, minute, and second. We propose a way to represent normalized values of the relative time expressions such as before, after, and count, and also design a set of rules to extract the relative time information from texts. With a new corpus constructed using the new attributes that consists of dialog, news, and history documents, we observed that our rule-set generally achieved 70% accuracy on the 1,041 documents. Especially, with the most frequently appeared attributes such as year, day, and week, we got higher accuracies compared to other attributes. The results of this study, our proposed timex3 attributes and the rule-set, will be useful in the development of services such as question-answer systems and chatbots.

Development of a Real-time Fault Diagnosis System for Electric Motors using radiated sound signals (방사음을 이용한 모터 결함 판정용 실시간 전문가 시스템 개발)

  • 경용수;김상명;왕세명
    • Proceedings of the Korean Society for Noise and Vibration Engineering Conference
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    • 2001.05a
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    • pp.603-608
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    • 2001
  • In order to distinguish fault electric motors automatically in real time. an intelligent diagnosis technique may be required. This paper presents an automatic fault detection system for electric motors by using their acoustic noises. Time signals of each candidate motor were measured in an anechoic chamber for further analysis. Spectral analysis was first carried out and they showed that two typical types of fault motors could be successfully distinguished in the frequency domain; bearing faults and scratches. Unlike the trend of normal motors that shows only a single dominant peak at around 2000 ㎐, several peaks are bunched together in bearing fault motors. On the other hand, large frequency noises at around 6500 ㎐ are newly arisen in scratchy fault motors. However, the processing time for spectral analysis was rather long for a real time application in production lines. Thus, a number of band-pass filters were used in the time domain instead for a real time application. Before applying filters, the bands of filters were set from the information of spectral analysis. By applying a set of band-pass filters, the RMS values of each filtered signal were calculated, and thus the normal and damaged motors could be successfully distinguished.

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A Tolerant Rough Set Approach for Handwritten Numeral Character Classification

  • Kim, Daijin;Kim, Chul-Hyun
    • Proceedings of the Korean Institute of Intelligent Systems Conference
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    • 1998.06a
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    • pp.288-295
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    • 1998
  • This paper proposes a new data classification method based on the tolerant rough set that extends the existing equivalent rough set. Similarity measure between two data is described by a distance function of all constituent attributes and they are defined to be tolerant when their similarity measure exceeds a similarity threshold value. The determination of optimal similarity theshold value is very important for the accurate classification. So, we determine it optimally by using the genetic algorithm (GA), where the goal of evolution is to balance two requirements such that (1) some tolerant objects are required to be included in the same class as many as possible. After finding the optimal similarity threshold value, a tolerant set of each object is obtained and the data set is grounded into the lower and upper approximation set depending on the coincidence of their classes. We propose a two-stage classification method that all data are classified by using the lower approxi ation at the first stage and then the non-classified data at the first stage are classified again by using the rough membership functions obtained from the upper approximation set. We apply the proposed classification method to the handwritten numeral character classification. problem and compare its classification performance and learning time with those of the feed forward neural network's back propagation algorithm.

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A Philosophical Implication of Rough Set Theory (러프집합론의 철학적 함의)

  • Park, Chang Kyun
    • Korean Journal of Logic
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    • v.17 no.2
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    • pp.349-358
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    • 2014
  • Human being has attempted to solve the problem of imperfect knowledge for a long time. In 1982 Pawlak proposed the rough set theory to manipulate the problem in the area of artificial intelligence. The rough set theory has two interesting properties: one is that a rough set is considered as distinct sets according to distinct knowledge bases, and the other is that distinct rough sets are considered as one same set in a certain knowledge base. This leads to a significant philosophical interpretation: a concept (or an event) may be understood as different ones from different perspectives, while different concepts (or events) may be understood as a same one in a certain perspective. This paper claims that such properties of rough set theory produce a mathematical model to support critical realism and theory ladenness of observation in the philosophy of science.

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Set, a Putative Oncogene, As a Biomarker for Prenatal Exposure to Bisphenol A

  • Lee, Ho-Sun;Pyo, Myoung-Yun;Yang, Mi-Hi
    • Asian Pacific Journal of Cancer Prevention
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    • v.13 no.6
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    • pp.2711-2715
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    • 2012
  • Background: Bisphenol A (BPA), an endocrine disrupting chemical, has been suspected to pose carcinogenic risks. However, likely mechanisms are obscure and there are difficulties to estimating its real significance for cancer development. Methods: We therefore studied BPA-induced proteomic alterations in immune organs of ICR mice offspring that were prenatally exposed to BPA (15 and 300 mg/L of drinking water). We performed 2D-gel analyses of samples, considering differences in spleen, exposure levels, sex, and ages. Results: From proteomic analyses, we found various proteins were up- or down-regulated by BPA. Among them, SET, a putative oncogene and inhibitor of phosphatase 2A, was significantly down-regulated in a BPA dose-dependent manner. We also confirmed down-regulation of SET in western blot and real time PCR analyses. From gene network analysis, SET is predicted to communicate with other genes including CYP17, which is involved in biosynthesis and metabolism of sex-hormones. Conclusions: This study provided evidence that SET can be applied as a new biomarker for prenatal BPA exposure and suggests a potential new mechanism of action in that BPA may disrupt CYP17 via SET.

On causality in a space-time

  • Kim, Jin-Hwan
    • Communications of the Korean Mathematical Society
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    • v.11 no.3
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    • pp.783-788
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    • 1996
  • We study some causality characterizations in a space-time by considering chronological common future (or past) sets and indecomposable sets that are important roles in studying causal boundary structure of the space-time.

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A Study on the Analysis of Container Physical Distribution System -Pusan Port Oriented- (물류시스템 분석에 관한 연구 - 부산항을 중심으로 -)

  • Park, C.H.;Lee, C.Y.
    • Journal of Korean Port Research
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    • v.5 no.2
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    • pp.19-37
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    • 1991
  • This work aims to : establish a model of the container physical distribution system of Pusan port comprising 4 sub-systems of a navigational system, on-dock cargo handling/transfer/storage system, off-dock CY system and an in-land transport system : examine the system regarding the cargo handling capability of the port and analyse the cost of the physical distribution system. The overall findings are as follows : Firstly in the navigational system, average tonnage of the ships visiting the Busan container terminal was 33,055 GRT in 1990. The distribution of the arrival intervals of the ships' arriving at BCTOC was exponential distribution of $Y=e^{-x/5.52}$ with 95% confidence, whereas that of the ships service time was Erlangian distribution(K=4) with 95% confidence, Ships' arrival and service pattern at the terminal, therefore, was Poisson Input Erlangian Service, and ships' average waiting times was 28.55 hours In this case 8berths were required for the arriving ships to wait less than one hour. Secondly an annual container through put that can be handled by the 9cranes at the terminal was found to be 683,000 TEU in case ships waiting time is one hour and 806,000 TEU in case ships waiting is 2 hours in-port transfer capability was 913,000 TEU when berth occupancy rate(9) was 0.5. This means that there was heavy congestion in the port when considering the fact that a total amount of 1,300,000 TEU was handled in the terminal in 1990. Thirdly when the cost of port congestion was not considered optimum cargo volume to be handled by a ship at a time was 235.7 VAN. When the ships' waiting time was set at 1 hour, optimum annual cargo handling capacity at the terminal was calculated to be 386,070 VAN(609,990 TEU), whereas when the ships' waiting time was set at 2 hours, it was calculated to be 467,738 VAN(739,027 TEU). Fourthly, when the cost of port congestion was considered optimum cargo volume to be handled by a ship at a time was 314.5 VAN. When the ships' waiting time was set at I hour optimum annual cargo handling capacity at the terminal was calculated to be 388.416(613.697 TEU), whereas when the ships' waiting time was set 2 hours, it was calculated to be 462,381 VAN(730,562 TEU).

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Analysis of RTM Process Using the Extended Finite Element Method (확장 유한 요소 법을 적용한 RTM 공정 해석)

  • Jung, Yeonhee;Kim, Seung Jo;Han, Woo-Suck
    • Composites Research
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    • v.26 no.6
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    • pp.363-372
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    • 2013
  • Numerical simulation for Resin Transfer Molding manufacturing process is attempted by using the eXtended Finite Element Method (XFEM) combined with the level set method. XFEM allows to obtaining a good numerical precision of the pressure near the resin flow front, where its gradient is discontinuous. The enriched shape functions of XFEM are derived by using the level set values so as to correctly describe the interpolation with the resin flow front. In addition, the level set method is used to transport the resin flow front at each time step during the mold filling. The level set values are calculated by an implicit characteristic Galerkin FEM. The multi-frontal solver of IPSAP is adopted to solve the system. This work is validated by comparing the obtained results with analytic solutions. Moreover, a localization method of XFEM and level set method is proposed to increase the computing efficiency. The computation domain is reduced to the small region near the resin flow front. Therefore, the total computing time is strongly reduced by it. The efficiency test is made with a simple channel flow model. Several application examples are analyzed to demonstrate ability of this method.