• Title/Summary/Keyword: Segment similarity

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Ontogenetic variation in Chironomus flaviplumus (Diptera, Chironomidae) larvae

  • Hyunsu Yoo;Jae-won Park;Ihn-Sil Kwak
    • Journal of Species Research
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    • v.13 no.1
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    • pp.41-49
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    • 2024
  • Chironomus is a large genus of Diptera comprising about 400 species and occurs worldwide except for Antarctica. The strong morphological cross-taxon similarity of chironomid larvae renders identification at the species level difficult. Here, we analyzed the morphology of larvae of Chironomus flaviplumus, an easily cultured species employed as a bioindicator in polluted environments, to determine identifying morphological characteristics at the first through fourth instar. Observed differences appearing at each instar include the presence or absence of setae on the body and tubules on the 10th and 11th body segment, the number of seta interna in the mandible, and the presence or absence of ring organs in the antennae. Some specific morphological characteristics did not change after hatching. Our findings provide a reliable method for identifying C. flaviplumus larvae.

A Object-Based Image Retrieval Using Feature Analysis and Fractal Dimension (특징 분석과 프랙탈 차원을 이용한 객체 기반 영상검색)

  • 이정봉;박장춘
    • Journal of Korea Multimedia Society
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    • v.7 no.2
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    • pp.173-186
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    • 2004
  • This paper proposed the content-based retrieval system as a method for performing image retrieval through the effective feature extraction of the object of significant meaning based on the characteristics of man's visual system. To allow the object region of interest to be primarily detected, the region, being comparatively large size, greatly different from the background color and located in the middle of the image, was judged as the major object with a meaning. To get the original features of the image, the cumulative sum of tile declination difference vector the segment of the object contour had and the signature of the bipartite object were extracted and used in the form of being applied to the rotation of the object and the change of the size after partition of the total length of the object contour of the image into the normalized segment. Starting with this form feature, it was possible to make a retrieval robust to any change in translation, rotation and scaling by combining information on the texture sample, color and eccentricity and measuring the degree of similarity. It responded less sensitively to the phenomenon of distortion of the object feature due to the partial change or damage of the region. Also, the method of imposing a different weight of similarity on the image feature based on the relationship of complexity between measured objects using the fractal dimension by the Boxing-Counting Dimension minimized the wrong retrieval and showed more efficient retrieval rate.

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Symptom Determinant as RNA3 of Lily Isolates of Cucumber mosaic virus on Zucchini Squash

  • Cho, Seung-Kook;Ahn, Hong-Il;Kim, Min-Jea;Choi, Jang-Kyung;Ryu, Ki-Hyun
    • The Plant Pathology Journal
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    • v.20 no.3
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    • pp.212-219
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    • 2004
  • Three isolates of Cucumber mosaic virus (CMV) from lily plants showing mosaic and distortion symptoms were detected by reverse-transcriptase polymerase chain reaction (RT-PCR) using primers specific to Cucumovirus genus namely, LK-CMV, LK4-CMV, and LKS-CMV. Restriction enzymes patterns of the RT-PCR products revealed that the lily isolates belonged to subgroup IA of CMV. In terms of biological properties, the lily isolates have highly similar but distinct pathogenicity as reported in other lily strains and ordinary strains of CMV. To characterize the molecular properties, cDNAs containing coat protein (CP) gene and 3' non-coding region (NCR) of RNA3 for the isolates were cloned and their nucleotide sequences were determined. The CP similarity (218 amino acids) was highly homologous (>97%) with that of subgroup I CMV strains. However, an additional 20-nulcleotide long segment was only present in 3' NCR of lily isolates, which form an additional stem-loop RNA structure. By using chimeric construct exchange cDNA containing 3'NCR of LK-CMV into the full-length cDNA clone of RNA3 of Fny-CMV, this additional segment may prove to be significant in the identification and fitness of the virus in lily plants. The pathology of zucchini squash infected by F1F2L3-CMV, a pseudorecombinant virus was showed to change drastically the severe mosaic and stunting symptom into a mild chlorotic spot on systemic leave, compared with Fny-CMV. To delimit the sequence of RNA3 affected the pathology, various RNA3 chimeras were constructed between two strains of CMV. The symptom determinants of F1F2L3-CMV were mapped to the positions amino acid 234, 239, and 250 in 3a movement protein (MP). RNA3 chimeras changed the sequences encoding three amino acids were resulted in alteration of systemic symptom.

Fuzzy Relevance-based Transcoding for Differentiated Streaming Media Service in the Proxy System (프록시 시스템에서 차별화된 스트리밍 미디어 서비스를 위한 퍼지 적합도 기반 트랜스 코딩)

  • Lee, Chong-Deuk
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.12 no.6
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    • pp.2785-2792
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    • 2011
  • Such problems as delay, congestion, and crosstalk in the proxy system degrade not only QoS (Quality of Service) but responsiveness and reliability of the streaming media service. To solve this problem this paper proposed a FRTP (Fuzzy Relevance-based Transcoding Proxy) mechanism. The proposed FRTP mechanism analyzes fuzzy similarity for partitioned segment versions of media objects to create a FRTG (Fuzzy Relevance-based Transcoding Graph). Created FRTG determines the transcoding for partitioned media object segment versions. Determined transcoding improves DSR (Delay Saving Ratios), CHPR (Cache Hit Precision Ratio), and CHRR (Cache Hit Recall Ratio). The proposed mechanism is simulated to evaluate such performance parameters as DSR, CHPR, and CHRR. Simulation results shows that the proposed mechanism outperforms in DSR, CHPR and CHRR compared with the other existing mechanisms.

A molecular Genetic Variation among Intra-poplations of Korean shiner, Coreoleuciscus splendidus Mori (Cyprinidae) (한국산 쉬리, Coreoleuciscus splendidus (잉어과)의 종내 집단간 분자 유전 변이)

  • Song, Ho-Bok;Park, Gab-Man
    • Korean Journal of Ichthyology
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    • v.18 no.2
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    • pp.78-86
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    • 2006
  • We examined the genetic diversity in intra-populations of Korean shiner, Coreoleuciscus splendidus, in six major rivers (Bukhan, Namhan, Geum, Osipcheon, Nakdong and Seomjin river) of Korea based on two different mitochondrial genes, the mitochondrial cytochrome b and the 16S rRNA. Analysis of sequence variation in a 657-bp segment of the mitochondrial cytochrome b gene revealed deep divergence among populations (98.2~99.9%) and high genetic diversity from geographically isolated populations. Intra-specific variation in this 697-bp segment of the 16S rRNA gene sequences was very low and nearly identical. Six isolate populations of C. splendidus showed a high similarity (97.7%~99.7%). This result may be indicative of a complex history of connection and isolation of the rivers in the Korea peninsula.

Sequence analysis of the variable VP2 gene of infectious bursal disease viruses isolated in Korea (Infectious bursal disease virus(국내분리주)의 variable VP2 gene의 분석)

  • Kwon, Hyuk-moo;Kim, Dae-kyu;Seong, Hwan-woo
    • Korean Journal of Veterinary Research
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    • v.39 no.3
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    • pp.545-553
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    • 1999
  • A 474-base pair segment covering the hypervariable region of VP2 gene from six Korean infectious bursal disease virus(K-IBDV) isolates(K1, K2, SH/92, 225, 269, 310) and one attenuated IBDV(DAE) were amplified using RT-PCR, sequenced, and compared with published sequences for IBDV. K-IBDV isolates(K1, K2, SH/92, 225, 269) and foreign very virulent(vv) IBDV strains had 94.93~100% amino acid sequence similarity. K-IBDV isolate 310 and other K-IBDV isolates had 84.31~86.07% amino acid sequence similarity. Attenuated strain(DAE), like other attenuated strain, has substitution at positions 279(D to N) and 284(A to T) as well as in the serine-rich heptapeptide region. Five K-IBDV isolates except 310 isolate share unique amino acid residues at positions 222(A), 256(I), 294(I) which are not present in other standard and attenuated strains. At the two hydrophilic region, K-IBDV isolates except 310 isolate had identical amino acids comparing with Belgium vv IBDV 894VB but had four amino acid substitutions comparing with Chinese vv IBDV F9502. The SWSASGS heptapeptide is conserved in all K-IBDV isolates. The sequence of K-IBDV isolate 310 was markedly different from other IBDV strains, evolving from a separate lineage than the others. By phylogenetic analysis, Five K-IBDV isolates except 310 isolate were categorized in one group with foreign vv IBDV isolates but K-IBDV isolate 310 was categorized in a separate group which was differentiated from other compared IBDV strains.

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A Statistical Analysis of the Seismicity of the Yangsan Fault System (양산단층계 지진활동의 통계적 분석)

  • 이기화;이전희;경재복
    • The Journal of Engineering Geology
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    • v.8 no.2
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    • pp.99-114
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    • 1998
  • The Yangsan fault system of Kyungsang Basin in the southeastern part of Korean peninsula is one of the most important structures in the peninsula. A number of strong earthquakes occurred in the vicinity of the fault. It was suggested that this fault can be divided into three segments: northern, central and southern ones. Earthquake data around the Yangsan fault were classified into two groups as incomplete and complete ones; the former is the data before the Choseon Dynasty and the latter is those since the dynasty. The maximum likelihood method was applied to compute seismicity parameters such as earthquake occurrence rates, b-values of frequency-magnitude relation and maximum possible magnitudes for each segment and the entire fault. These parameters show considerably different values from segment to segment. The b-value for the entire fault turned out to be 0.85 and maximum possible magnitudes for the northern, central and southern segments are 5.2, 6.8 and 6.0, respectively. The mean return periods for the maximum possible magnitudes for each segments are greater than 1000 years. In addition, according to the analysis of the frequency-magnitude relation, the occurrence pattern of earthquakes around the Yangsan fault show more similarity to the characteristic earthquake model than the Gutenberg-Richter model. The data for each segments are, however, too scarce to obtain any physically meaningful results.

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Graph-based High-level Motion Segmentation using Normalized Cuts (Normalized Cuts을 이용한 그래프 기반의 하이레벨 모션 분할)

  • Yun, Sung-Ju;Park, An-Jin;Jung, Kee-Chul
    • Journal of KIISE:Software and Applications
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    • v.35 no.11
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    • pp.671-680
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    • 2008
  • Motion capture devices have been utilized in producing several contents, such as movies and video games. However, since motion capture devices are expensive and inconvenient to use, motions segmented from captured data was recycled and synthesized to utilize it in another contents, but the motions were generally segmented by contents producers in manual. Therefore, automatic motion segmentation is recently getting a lot of attentions. Previous approaches are divided into on-line and off-line, where ow line approaches segment motions based on similarities between neighboring frames and off-line approaches segment motions by capturing the global characteristics in feature space. In this paper, we propose a graph-based high-level motion segmentation method. Since high-level motions consist of repeated frames within temporal distances, we consider similarities between neighboring frames as well as all similarities among all frames within the temporal distance. This is achieved by constructing a graph, where each vertex represents a frame and the edges between the frames are weighted by their similarity. Then, normalized cuts algorithm is used to partition the constructed graph into several sub-graphs by globally finding minimum cuts. In the experiments, the results using the proposed method showed better performance than PCA-based method in on-line and GMM-based method in off-line, as the proposed method globally segment motions from the graph constructed based similarities between neighboring frames as well as similarities among all frames within temporal distances.

Proposing Shape Alignment for an Improved Active Shape Model (ASM의 성능향상을 위한 형태 정렬 방식 제안)

  • Hahn, Hee-Il
    • Journal of Korea Multimedia Society
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    • v.15 no.1
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    • pp.63-70
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    • 2012
  • In this paper an extension to an original active shape model(ASM) for facial feature extraction is presented. The original ASM suffers from poor shape alignment by aligning the shape model to a new instant of the object in a given image using a simple similarity transformation. It exploits only informations such as scale, rotation and shift in horizontal and vertical directions, which does not cope effectively with the complex pose variation. To solve the problem, new shape alignment with 6 degrees of freedom is derived, which corresponds to an affine transformation. Another extension is to speed up the calculation of the Mahalanobis distance for 2-D profiles by trimming the profile covariance matrices. Extensive experiment is conducted with several images of varying poses to check the performance of the proposed method to segment the human faces.

Object-based Image Retrieval for Color Query Image Detection (컬러 질의 영상 검출을 위한 객체 기반 영상 검색)

  • Baek, Young-Hyun;Moon, Sung-Ryong
    • Journal of the Institute of Electronics Engineers of Korea CI
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    • v.45 no.3
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    • pp.97-102
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    • 2008
  • In this paper we propose an object-based image retrieval method using spatial color model and feature points registration method for an effective color query detection. The proposed method in other to overcome disadvantages of existing color histogram methods and then this method is use the HMMD model and rough set in order to segment and detect the wanted image parts as a real time without the user's manufacturing in the database image and query image. Here, we select candidate regions in the similarity between the query image and database image. And we use SIFT registration methods in the selected region for object retrieving. The experimental results show that the proposed method is more satisfactory detection radio than conventional method.