• Title/Summary/Keyword: Seed purity

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Application of EST-SSR Marker for Purity Test of Watermelon F1 Cultivars (EST-SSR 마커 적용을 통한 수박 F1 품종 순도 검정)

  • Choi, Young-Mi;Hwang, Ji-Hyun;Kim, Kwang-Whan;Lee, Yong-Jae;Kang, Jeom-Sun;Choi, Young-Hwan;Son, Beung-gu;Park, Young-Hoon
    • Journal of agriculture & life science
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    • v.46 no.4
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    • pp.85-92
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    • 2012
  • This study was conducted to develop a set of EST-SSR marker for the purity test of commercial F1 hybrid cultivars in the watermelon. A total of 353 EST-SSR were selected and tested on seven F1 cultivars and their 11 parental lines achieved from NH Seeds Inc., Korea. Among tested 96 primer sets, WMU0056 for 'Orange', WMU0400 for 'Heukbo', WMU0056 and WMU0400 for 'Sindong', and WMU0056 and WMU0400 for 'Serona' revealed polymorphisms between the parental lines and heterozygosity from these F1 cultivers. Of 122 primer sets tested for 'Haedong', WMU0056, WMU0400, WMU0580, WMU1211, WMU4136, and WMU448 showed polymorphisms that were appropriate for the F1 purity test. WMU0056 and WMU0400 can be useful for 'Haedong', as well. Relatively low polymorphisms between parental lines were detected for 'Kulnara'(5%) and 'Hwangpea'(2%), and therefore, all 353 primer sets were tested on these cultivars. As the result, WMU5339 and WMU7003 were found to be useful for the F1 purity test in 'Kulnara' and 'Hwangpea', respectively. Using these EST-SSR markers developed by ICuGI, hybridity of the seeds for four F1 cultivars produced from farmers was evaluated, and levels of the F1 purity higher than 97.5% was observed from all seed populations. Our results indicated that the watermelon EST-SSR marker information posted in ICuGI could be utilized for developing codomiant and locus-specific markers that are highly effective for the F1 purity test.

Selection of Lines Resistant to Phytophthora capsici from Capsicum chinense, Korean Land Races and Resistant Genetic Resources of Pepper (Capsicum chinense, 재래종 및 저항성 고추 유전자원에서 역병 저항성 계통 선발)

  • Kim, Jeong-Hoon;Yeo, Seung-Ho;Kim, Dong-Woo;Bae, Su-Yeon;Han, Jeong-Hye;Hwang, Hee-Suk;Kim, Byung-Soo
    • Current Research on Agriculture and Life Sciences
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    • v.20
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    • pp.9-18
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    • 2002
  • A total of 31 C. chinense lines selected from 2000 screening were tested again for resistance to P. capsid but resistance was not found in tile lines. A total of 26 selections from Korean land races tested 2001 spring were tested again for resistance to P. capsici, KC180, KC230, KC195 and KC194 showed moderate resistance to P. capsid. However, it was apparent on the basis of horticultural characteristics that KC180 and KC230 had been naturally crossed with AC2258 and CM334, respectively. CM334 and AC2248 seed lots that were increased in different years were taken out and tested for resistance to improve their genetic purity because the resistant genetic resources have been showing some off-types in tile population. Off-types began to be found in 1992 seed lots and tile proportion and degree of tile offs was increasing with time up to 2001. Plants true to the type in 1992 seed lots were selected and their inbred seeds were mass produced in a net cage in the greenhouse. AC2258 included in the experiment together was uniform. In 1995 seed lots of CM334, plants with resistance to P. capsici and low or no number of lateral branching at cotyledonary axil, although they were off from tile original CM334, were found and selection was applied to breed lines fixed in tile characters.

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Treatment of Fluoride in Semiconductor Wastewater by using Fluidized Bed Reactor (유동상 반응기를 이용한 반도체 폐수의 불소 처리)

  • An, Myeong-Ki;Kim, Keum-Yong;Ryu, Hong-Duck;Lee, Sang-Ill
    • Journal of Korean Society of Environmental Engineers
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    • v.32 no.5
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    • pp.437-442
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    • 2010
  • This work was initiated both to maximize purity of calcium fluoride sludge and to minimize water content in the settled sludge. The sludge was produced in the process of fluoride removal of semiconductor wastewater by the addition of $Ca^{2+}$ ion. Fludized bed reactor(FBR) using calcium fluoride as a seed was adapted. Optimum pH and molar ratio of $Ca^{2+}/F^-$ were determined in lab-scale study. The experimental results showed that fluoride removal was increased as pH and molar ratio of $Ca^{2+}/F^-$ increased, with the best removal of 79.8% in an optimum condition. In the optimum point of fluoride removal, very low ${PO_4}^{3-}$-P removal of 9.3% was observed. It indicates forming $CaF_2$ crystal of high purity, when side reaction of calcium with phosphate was minimized. In addition, water content of settled sludge was 19.3%, which is relatively low compared to other fluoride removal processes. Consequently, the FBR process proposed in this study was very effective in fluoride removal, producing good sludge of high purity and less water content.

Removal of Sodium Contained in Al(OH)3 Synthesized by Bayer Process (베이어법으로 합성된 Al(OH)3에 함유된 미량 Na 성분의 제거)

  • Choi, Hee-Young;Kim, Do-Hyeong;Park, No-Kuk;Lee, Tae-Jin;Kang, Mi-Sook;Lee, Won-Gun;Kim, Heun-Duk;Park, Jun-Woo
    • Clean Technology
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    • v.18 no.1
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    • pp.63-68
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    • 2012
  • In this study, aluminum hydroxide ($Al(OH)_3$) was synthesized by Bayer process and sodium contained in $Al(OH)_3$ was removed with the acid solution such as HCl and acetic acid for the synthesis of high purity alumina. The bauxite produced in Queensland of Australia was used for the production of alumina by Bayer, and was crushed to a particle size of below 10 um by attrition mill. The crushed bauxite was treated in sodium hydroxide solution of 5 N for the elution of aluminum component. The elution of aluminum from bauxite was carried out at $140^{\circ}C$ and 3.4 atm in autoclave. The sample solution was separated to the red mud and liquid solution by filter paper. The elution of aluminum from bauxite was confirmed with changing a structure and aluminum content in both bauxite and red mud analyzed by XRD and EDX. Aluminum contained in the separated solution was crystallized to $Al(OH)_3$ with the addition of aluminum hydroxide used as the seed material. $Al(OH)_3$ powder obtained during the crystallization process was purified by several times washing with distillated water. It was also confirmed that the sodium remained in $Al(OH)_3$ powder is removed with acid solution. The purity of $Al(OH)_3$ powder produced in this study was 99.3% and the content of sodium was reduced to approximately 0.009% after the acid treatment.

The Extracting Methods of the Seeds of Yew(Taxus cuspidata Sieb) by Solvent Extraction and Its Efficacy (주목(朱木)씨앗 추출물의 제조방법 및 효능효과)

  • Zhoh, Choon-Koo;Kim, In-Young
    • Korean Journal of Pharmacognosy
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    • v.33 no.4 s.131
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    • pp.364-371
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    • 2002
  • Yew (Taxus cuspidata Sibe) selected cultivation as drug, food and decorative plant in Gyong-gi province in Korea. To extract the water soluble active ingredients, as a extracting method, there was extracted with 20g of dried seeds with each 20g of butylene glycol(BG) and propylene glycol(PG), and 40 mL of water mixing 72 hours at $40{\pm}5^{\circ}C$, and then they were filtrated by 400 mesh. Appearance of extract of seeds was pale brown, $pH=4.5{\pm}0.5$, $gravity=1.013{\pm}0.05$, a reflective $index=1.373{\pm}0.05$, and yield=75%. Also, to extract the high purity oil from seeds, it minutely pulverized the dried seeds and added the hexane, mixing 2 hours at $20{\pm}57^{\circ}C$. And then, this filtrated it with 400-mesh. It got the purified oil through evaporating them at $55^{\circ}C$ during under vacuum. As the results, appearance was slightly brown, gravity=0.922 acid value=0.12, saponification value=192, and it should be obtained the $40{\pm}5%$ of yield. As the efficacy evalution of cosmetic field, the antioxidative activities by NBT method were stronger 86.0% from extract of talus seeds than 52.0% from green tea extract and 35.0% from skullcap extract as well as the antioxidative activities by DPPH method were stronger 93.7% from extract of seed than 60.3% from extract of green tea and 27.1% from extract of skullcap. These are more effective than other plant extracts. The collagen synthesis rate on the activating fibroblast for Taxus cuspidata Sibe extract showed 35.43%. As the activity of the skin elasticity, PPE(porcine pancreatic elastase)-inhibitory activities of talus extract was 50.8%. Anti-inflammatory activity was more effective to be taken 41.1% of taxus seed oil than 24.2% of steady glycyrrhetinate (SG) as a control.

Rapid Identification of Ginseng Cultivars (Panax ginseng Meyer) Using Novel SNP-Based Probes

  • Jo, Ick-Hyun;Bang, Kyong-Hwan;Kim, Young-Chang;Lee, Jei-Wan;Seo, A-Yeon;Seong, Bong-Jae;Kim, Hyun-Ho;Kim, Dong-Hwi;Cha, Seon-Woo;Cho, Yong-Gu;Kim, Hong-Sig
    • Journal of Ginseng Research
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    • v.35 no.4
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    • pp.504-513
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    • 2011
  • In order to develop a novel system for the discrimination of five ginseng cultivars (Panax ginseng Meyer), single nucleotide polymorphism (SNP) genotyping assays with real-time polymerase chain reaction were conducted. Nucleotide substitution in gDNA library clones of P. ginseng cv. Yunpoong was targeted for the SNP genotyping assay. From these SNP sites, a set of modified SNP specific fluorescence probes (PGP74, PGP110, and PGP130) and novel primer sets have been developed to distinguish among five ginseng cultivars. The combination of the SNP type of the five cultivars, Chungpoong, Yunpoong, Gopoong, Kumpoong, and Sunpoong, was identified as 'ATA', 'GCC', 'GTA', 'GCA', and 'ACC', respectively. This study represents the first report of the identification of ginseng cultivars by fluorescence probes. An SNP genotyping assay using fluorescence probes could prove useful for the identification of ginseng cultivars and ginseng seed management systems and guarantee the purity of ginseng seed.

Application of the Molecular Marker in Linkage Disequilibrium with Ms, a Restorer-of-fertility Locus, for Improvement of Onion Breeding Efficiency

  • Kim, Sujeong;Kim, Sunggil
    • Horticultural Science & Technology
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    • v.33 no.4
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    • pp.550-558
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    • 2015
  • To analyze the linkage relationships among molecular markers recently reported to be linked to onion (Allium cepa L.) Ms, a restorer-of-fertility locus, in onion (Allium cepa L.), three single nucleotide polymorphism markers were converted into cleaved amplified polymorphic sequence (CAPS) markers based on onion transcriptome sequences and the rice genome database. Analysis of the recombinants selected from 4,273 segregating plants using CAPS and other linked markers demonstrated the jnurf13 and jnurf610 markers to perfectly co-segregate with the Ms locus. In contrast to jnurf13, the jnurf610 marker was not in perfect linkage disequilibrium with the Ms locus in diverse breeding lines. Thus, the jnurf13 marker and the marker for identification of cytoplasm types were utilized to enhance the efficiency of onion breeding through four applications. First, 89 maintainer lines containing the normal cytoplasm and homozygous recessive Ms genotypes were successfully identified from 100 breeding lines. Second, these two molecular markers were used to analyze the main sources of male-fertile contaminants frequently found in the male-sterile parental lines during F1 hybrid seed production. The majority of the contaminants contained heterozygous Ms genotypes, indicating that pollen grains harboring the dominant Ms genotype may have been introduced during propagation of the maintainer lines. Therefore, the genetic purity of the two maintainer lines was analyzed in the third application, and the results showed that both maintainer lines contained 13-21% off-types. Finally, the two markers were used to increase the seed yield potentials of two open-pollinated varieties containing sterile cytoplasms by removing the plants harboring homozygous recessive and heterozygous Ms genotypes.

Development of SCAR Markers for Early Identification of Cytoplasmic Male Sterility Genotype in Chili Pepper (Capsicum annuum L.)

  • Kim, Dong Hwan;Kim, Byung-Dong
    • Molecules and Cells
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    • v.20 no.3
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    • pp.416-422
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    • 2005
  • We previously used Southern blot analysis to detect restriction-length polymorphisms between male fertile and cytoplasmic male sterile (CMS) cytoplasms at the coxII and atp6 loci of the mtDNA of Capsicum annuum L. Two copies of atp6 were found in each male fertile and CMS pepper lines. Interestingly, one of the copies of atp6 in CMS pepper was a 3'-truncated pseudogene. The open reading frame of the coxII gene was the same in the fertile (N-) and CMS (S-) lines. However, the nucleotide sequence in the S-cytoplasm diverged from that in the N-cytoplasm 41 bp downstream of the stop codon. To develop CMS-specific sequence-characterized amplified region (SCAR) markers, inverse PCR was performed to characterize the nucleotide sequences of the 5' and 3' flanking regions of mitochondrial atp6 and coxII from the cytoplasms of male fertile (N-) and CMS (S-) pepper plants. Based on these data, two CMS-specific SCAR markers, 607 and 708 bp long, were developed to distinguish N-cytoplasm from S-cytoplasm by PCR. The CMS-specific PCR bands were verified for 20 cultivars containing either N- or S-cytoplasm. PCR amplification of CMS-specific mitochondrial nucleotide sequences will allow quick and reliable identification of the cytoplasmic types of individual plants at the seedling stage, and assessment of the purity of $F_1$ seed lots. The strategy used in this report for identifying CMS-specific markers could be adopted for many other crops where CMS is used for F1 seed production.

Pharmacognostical Evaluation of Trachyspermum roxburghianum (DC) Craib Fruits

  • Verma, Nitin;Khosa, R.L.
    • Natural Product Sciences
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    • v.17 no.1
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    • pp.45-50
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    • 2011
  • Sophisticated modern research tools for evaluation of medicinal plants are available but microscopic methods are one of the simplest and cheapest methods to establish the identity of the source materials. Pharmacognostical investigation of the dried, powdered and anatomical sections of the fruits of Trachyspermum roxburghianum (DC) Craib was carried out to determine its macro and microscopical characteristics along with its physical constants. Externally, the fruits, yellowish or greenish brown in colour are elongated, elliptical, slightly curved, prominently ridged and longitudinal. As seen in transectional views of the fruits from Trachyspermum roxburghianum, the mericarp has concave sides called commissural surfaces and a convex outer side called the dorsal surface. The mericarp has three primary ridges alternating with two secondary ridges on the dorsal side. On the commissural side, there are two primary ridges which are lateral in position and two secondary ridges in the commissural side. The seed is attached to the pericarp by a short stalk called a raphe. Circular, four-lobed calcium oxalate crystals are fairly abundant in the endosperm. Phytochemical studies revealed the presence of phenolic compounds, triterpenoids, proteins and sugars. The pharmacognostical profile of the fruits will assist in standardization for quality, purity and sample identification.

Studies on the Contents of Special Components and Estimation of Purity in Sesame oil -I : Contents of Sesamin and Sterols- (참기름의 특이성분함량(特異成分含量)과 순도결정(純度決定)에 관(關)한 연구(硏究) (제(第) 1 보(報)) -Sesamin 및 관련(關聯)Sterol를 중심(中心)으로-)

  • Ro, Ihl-Hyeob;Lee, Moon-Sun
    • Journal of Nutrition and Health
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    • v.16 no.2
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    • pp.107-114
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    • 1983
  • There has been no specific test available for identifying the sesame oil among common edible oils. As the contents of sesamin and the ratio of sterols allowed the estimation for the genuine sesame oil, the author investigated to establish some instrumental methods for verification of genuine sesame oil and its distribution in the market. The sesame oil was saponified and the sesamin and sterols were isolated from the unsaponiable fraction by Florisil column chromatography. The individual components were determined by gas- chromatography and sesamin standard (purified sesamin) was obtained by silicagel column chromatography. The gas- chromatographic condition using Flame Ionization Detector supported on 10% OV-101 with di-(2-ethylhexyl) sebacate as an internal standard was suitable, and quantitation of sesamin and sterols, including campesterol, stigmasterol and ${\beta}-sitosterol$ was carried out. The results of this study showed that contents of sesamin in genuine sesame oil were 0.3-0.5% and the ratio of stigmasterol to compesterol was 0.3-0.6 and ${\beta}-sitosterol$ to campesterol 3.0-3.8. The 50 samples from the markets in Seoul were composed of 70% genuine sesame oil, and others were mixed with palm oil, rape seed oil and soybean oil.

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