• Title/Summary/Keyword: Seed collection

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Genome-Based Insights into the Thermotolerant Adaptations of Neobacillus endophyticus BRMEA1T

  • Lingmin Jiang;Ho Le Han;Yuxin Peng;Doeun Jeon;Donghyun Cho;Cha Young Kim;Jiyoung Lee
    • Research in Plant Disease
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    • v.29 no.3
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    • pp.321-329
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    • 2023
  • The bacterium Neobacillus endophyticus BRMEA1T, isolated from the medicinal plant Selaginella involvens, known as its thermotolerant can grow at 50℃. To explore the genetic basis for its heat tolerance response and its potential for producing valuable natural compounds, the genomes of two thermotolerant and four mesophilic strains in the genus Neobacillus were analyzed using a bioinformatic software platform. The whole genome was annotated using RAST SEED and OrthVenn2, with a focus on identifying potential heattolerance-related genes. N. endophyticus BRMEA1T was found to possess more stress response genes compared to other mesophilic members of the genus, and it was the only strain that had genes for the synthesis of osmoregulated periplasmic glucans. This study sheds light on the potential value of N. endophyticus BRMEA1T, as it reveals the mechanism of heat resistance and the application of secondary metabolites produced by this bacterium through whole-genome sequencing and comparative analysis.

Effects of Zinc Toxicity on Larval Development and Seed Collection of Abalone, haliotis discus hannai (참전복, Haliotis discus hannai 유생발생 및 채묘에 미치는 아연독성)

  • 서대철;최상덕;라성주;양한춘;서해립
    • Journal of Aquaculture
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    • v.12 no.3
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    • pp.229-236
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    • 1999
  • in the present study, the zinc toxicity to larval development and seed attachment of the abalone, Haliotis discus hannai was obtained under continuous flow through system. The zinc concentration melted from zinc coating pipe for 7 months ranged from $89.00\pm2.55 \mu\textrm{g}/\ell to 15.23\pm2.58\mu\textrm{g}/\ell(Y=0.85M^2-19.71+109.96)$. Treatments were carried out with zinc concentration $0~160 \mu\textrm{g}/\ell$. The maximum and minimum of fertilization rate were $87.7\pm5.3%$ in control, $83.7\pm7.6%$ in zinc concentration $160\mu\textrm{g}/\ell$, respectively. The maximum and minimum of hatching rate were $87.5\pm4.5%$ in zinc concentration $10\mu\textrm{g}/\ell$, $79.3\pm5.6%$ in zinc concentration $160\mu\textrm{g}/\ell$, respectively. Both of the results were not significantly different (P>0.05). But the normality rate, setting rate and survival rate of abalone larvae at over zinc concentration TEX>$20\mu\textrm{g}/\ell$ decreased rapidly and showed significantly different from those of the other group(P<0.05).

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Studies on Wood Quality and Growth of Alnus glutinosa in Korea - Anatomical Properties - (글루티노사오리나무의 생장과 재질 - 해부학적 성질 -)

  • Kim, Min-Ji;Kim, Byung-Ro
    • Journal of the Korean Wood Science and Technology
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    • v.44 no.3
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    • pp.295-301
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    • 2016
  • In this study, relationship between seed origin and growth rate of Alnus glutinosa from different seed collection (Yugoslovia, ltaly, United Kingdom, Bulgaria) was investigated with focused on anatomical properties as wood fiber length, vessel element length and diameter. Alnus glutinosa showed diffuse-porous wood with scalariform perforation in alternate pitting. Ray height was 9~11 in tangential section and ray number were 16~26 in cross section. There were no differences on latewood focused on wood fiber length, length and diameter of vessel element, but difference on earlywood. Other than Yugoslavian seed, there was better growth rate with shorter wood fiber and vessel element length on latewood. However, seed from Yugoslovain showed better growth rate with longer wood fiber and vessel element length than other 3 seed orgins.

Variation of Major Isoflavone Contents in Soybeans (Glycine max (L.) Merill.) of Collection Area, Diversity, and Seed Coat Color

  • Yu-Mi Choi;Hyemyeong Yoon;Sukyeung Lee;Ho-Cheol Ko;Myoung-Jae Shin;Myung-Chul Lee;On sook Hur;Na young Ro;Kebede Taye Desta
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2020.08a
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    • pp.96-96
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    • 2020
  • Soybean seeds are important sources of non-nutritive health promoting metabolites. The contents of these metabolites are affected by both genetic and environmental factors. In the present study, the contents of five common isoflavones including daidzin, genistin, glycitin, malonyldaidzin, and malonylgenistin were analyzed in 72 soybeans of different seed coat colors, diversity, and of different origins including China (22), Japan (9), USA (12), India (4), and Korea (25). The average total isoflavone content (TIC) was maximum in Indian soybeans (3302.36 ㎍/g) and minimum in Chinese landraces (1214.95 ㎍/g). The Korean landraces had higher average TIC (2148.05 ㎍/g) than the USA genetic materials (1580.23 ㎍/g) and Japanese landraces (1485.99 ㎍/g). The content of malonylgenistin was in the range of 54.31 - 2385.68 ㎍/g in the entire population, and was the most abundant isoflavone irrespective of origin although there was content variation among individual soybeans. Besides, glycitin was the least concentrated isoflavone, and its content ranged from 0.00 to 79.79 ㎍/g. With respect to seed coat color, green soybeans from all countries displayed the maximum malonylgenistin and TIC contents. Exceptions were those of Korean and Indian origins where black and yellowish-green soybeans presented the highest malonylgenistin and TIC contents, respectively. In multivariate analysis, 92.72% of the variance was explained by the first two principal components, and the soybeans were grouped in to three clusters based on isoflavone contents. Overall, our findings signify the importance of seed coat color and origin as discriminant parameters, and provide wide spectrum of routes for breeding soybean cultivars.

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Distribution of Seed-borne fungi on Rice Seeds Affecting Rice Grain Qualify

  • Shim, Hong-Sik;Hong, Sung-Jun;Park, Hyo-Won;Kim, Yong-Ki;Yeh, Wan-Hae
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.119.2-120
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    • 2003
  • Seed-borne fungal pathogens on rice seeds were investigated in order to evaluate their effect on rice grain quality. Rice seeds of two cultivars, Ilmibyeo and Daesanbyeo were collected from 27 areas of Korea and the fungal parasites on seeds were isolated by using a blotter method. Isolation frequency and number of species were varied from collection areas of seed samples. A total 13 species of fungi were identified from the seeds. Among them, Altemana alternata was the most frequent over the country. Bipoiaris oryzae most commonly from Gyeongbuk and Jeonbuk, Alternaria padwickii from Jeonbuk, and Nigrospora oryzae from Choongnam. However Bipolaris. oryzae, Alternaria padwickii, and Nigrospora oryzae were the most frequently isolated fungi from Gyeongbuk and Jeonbuk, and Chungnam, respectively. B. oryzae, A. alternata, A. padwickii, and N. oryzae were dominants on Ilmibyeo showing 10.3%, 10.2%, 5.2%, and 5.2% infection rate, respectively. While, N. oryzae, A alternata, and Cladosporium sp. were most frequently isolated fungi from Deasanbyeo revealing 15.1%, 9.6%, and 7.5% infection rate, respectively. These fungi inhabiting on hulls or endosperms of rice seed might be considered as potential factors decreasing rice grain quality. Further investigation of the fungi on grain rice quality are undergoing.

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A WPHR Service for Wellness in the Arduino Environment (아두이노 환경에서 웰니스를 위한 WPHR 서비스)

  • Cho, Young-bok;Woo, Sung-hee;Lee, Sang-ho
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.22 no.1
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    • pp.83-90
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    • 2018
  • In this paper, we propose an algorithm for analyzing personal health log information in android environment, providing personal health log information in android environment, providing personalized exercise information and monitoring the condition of pedestrians. Personal health log data collection is performed based on raw data of user using MPU6050 sensor based on Arduino. Noise was removed and age threshold was applied to distinguish movement information. In addition, to protect personal information, safety is enhanced by providing anti-compilation prevention and encryption/decryption of APK file, and the result of movement information collection is measured according to sensor location. Experimental results showed that the MPU6050 sensor mounted one the ankle wsa measured 98.97% more accurately then the wrist. In addition, the loading time of SEED 128 bit encryption based DEX file has the average time of 0.55ms, minimizing the overhead.

Ex situ acclimatization of asymbiotically germinated seedlings of endangered lady's slipper orchid(Cypripedium macranthos Sw.) (멸종위기종 복주머니란 발아특성 및 실생묘 현지외 적응성 검토)

  • Lee, Joung Kwan;Kwon, Young Hee;Kim, Hee Kyu;Kim, Kyung Ok;Park, Jae Seong;Jeong, Mi Jin;Son, Sung Won;Suh, Gang Uk
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2018.10a
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    • pp.37-37
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    • 2018
  • We use two different methods for laboratory propagation from seed of lady's slipper orchid(Cypripedium macranthos Sw.); immature seed which also called green capsule or fully mature seed about 120~130 days from pollination. In green capsule culture, the seed pods should be collected within precisely right time. The right time of seed collection could be diverse under the wether conditions or nutritional factors of the plants. In fully matured seed culture, the more complicated procedures are needed to break the dormancy of the seed; thermal or chemical treatment. The seedlings in this study were easily germinated from immature seeds in Harvais medium; 53 days after pollination(DAP) in Cypripedium pubescens, DAP 65 in C. parviflorum and C. macranthos. The germinated seedlings were transplanted to hormone free media immediately to avoid abnormal growth of seedlings. When the seedlings have roots with a minimum length of around 2-3cm and have visible dormant buds, the seedlings were removed from the flask and stored in refrigerator for vernalization. To examine the correlation of seedlings and maternal plants, the 125 seedlings of C. macranthos were transplanted in the soil bed at a distance of 20-100 cm from mother plants on April 20. The survival rate of seedlings were 92% in 20 cm distance from the ripe plants, and 56 % in 100 cm distance. The seedlings which were transplanted near mother plants showed vigorous growth in plant height, leaf width, and especially dormant buds. Considering the existence of mycorrhiza which is a symbiotic association between a fungus and the roots of a orchid vascular, the various fungus from mother plants could affect the growth of the seedlings. These results indicate the possibility of high and stable production and practical industrialization of endangered lady's slipper orchids.

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Studies on the Development of Food Resources from Waste Seeds V. Chemical Composition of Water-melon Seed (폐기종실(廢棄種實)의 식량자원화(食糧資源化)에 관(關)하여 제(第)5보(報) : 수박씨의 화학적(化學的) 조성(組成))

  • Yoon, Hyung Sik;Kwon, Joong Ho;Hwang, Joo Ho;Bae, Man Jong
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.12 no.3
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    • pp.207-211
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    • 1983
  • An attempt was made to find out the possibility of utilizing water-melon seed as resources of food fats and protein. The water-melon seed contained 40.40% of crude fat and 28.36% of crude protein. The lipid fraction obtained by silicic acid column chromatography was composed of about 97.35% neutral lipid, and the main components of neutral lipid by thin layer chromatography were triglyceride(50.40%), diglyceride(21.84%) and sterol(11.48%). The predominant fatty acids of total and major lipid classes were linoleic acid(55.30-67.85%), palmitic acid(12.07-28.12%) and oleic acid(9.06-16.40%), whereas stearic acid and linolenic acid were detected as small amounts. The salt soluble protein of watermelon seed was highly dispersible in 0.02M sodium phosphate buffer containing about 0.7M $MgSO_4$, and the extractability of seed protein was about 27%. Glutamic acid and arginine were major amino acids, and the essential amino acids such as lysine, threonine, valine, methionine, isoleucine, leucine and phenylalanine were also detected. The electrophoretic analysis showed 6 bands in water-melon seed protein, and the collection rate of the main protein fraction purified by sephadex G-100 and G-200 was 52.4%. The amino acids of the main fraction protein were also mainly composed of glutamic acid and arginine. The molecular weight for the main protein of the water-melon seed was estimated to be 120,000.

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Development of a Framework for Semi-automatic Building Test Collection Specialized in Evaluating Relation Extraction between Technical Terminologies (기술용어 간 관계추출의 성능평가를 위한 반자동 테스트 컬렉션 구축 프레임워크 개발)

  • Jeong, Chang-Hoo;Choi, Sung-Pil;Lee, Min-Ho;Choi, Yun-Soo
    • The Journal of the Korea Contents Association
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    • v.10 no.2
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    • pp.481-489
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    • 2010
  • Due to the increase of the attention on relation extraction systems, the construction of test collections for assessing their performance has emerged as an important task. In this paper, we propose semi-automatic framework capable of constructing test collections for relation extraction on a large scale. Based on this framework, we develop a test collection which can assess the performance of various approaches to extracting relations between technical terminologies in scientific literatures. This framework can minimize the cost of constructing this kind of collections and reduce the intrinsic fluctuations which may come from the diversity in characteristics of collection developers. Furthermore, we can construct balanced and objective collections by means of controlling the selection process of seed documents and terminologies using the proposed framework.

Germination Characteristics of Chinese Milk Vetch(Astragalus sinicus L.) Seeds Produced in China and Korea (수입 및 국내 채종 자운영 종자의 발아 특성)

  • Kim, Sang-Yeol;Oh, Seong-Hwan;Choi, Kyung-Jin;Park, Sung-Tae;Kim, Jeong-Il;Yeo, Un-Sang;Kang, Hang-Won
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.54 no.4
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    • pp.384-389
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    • 2009
  • Germination characteristics of Chinese milk vetch(CMV) seeds produced from Hanam Province, China and Milyang, Korea were investigated to give basic information on the stability of seedling establishment in the CMV cultivation. The germination percentage of the imported CMV seed from China varied according to importation year and seed collection site ranging from 79~95%. The germination of black colored seed coat was lower than the light green colored ones and germination by seed weight was not significantly different. Although the seed germination was lower under dark than in the presence of light, it was not significantly different. The germination of the imported CMV seed slightly declined to only less than 6% after one-year of storage under natural environment conditions but it significantly decreased after two years. However, when the seed was stored at the $5^{\circ}C$, the seed germination was the same as after two years of storage. On the other hand, fresh CMV seed produced in Milyang, Korea had only 8% germination due to seed coat dormancy but the germination increased to 73~85% after breaking seed dormancy after a year of storage. The high germination percentage of 72~82% was still maintained even after 27 months of seed storage unlike the CMV seed produced from China. These results indicate that CMV seeds do not require light for germination and the seed from China should be used within one-year after importation while the seeds produced from Korea can be used even after two years from harvest for stable CMV seedling establishment in the CMV-rice cropping system.