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Soil Classification of Anthropogenic Soils in a Remodeled Area Using Soil Taxonomy and World Reference Base for Soil Resources

  • Lee, Seung-Been;Chun, Hyen-Chung;Cho, Hyun-Jun;Hyun, Byung-Keun;Song, Kwan-Cheol;Zhang, Yong-Seon;Sonn, Yeon-Kyu;Park, Chan-Won
    • Korean Journal of Soil Science and Fertilizer
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    • v.46 no.6
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    • pp.536-541
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    • 2013
  • In Soil Taxonomy system, anthropogenic soils are still classified as Entisols since the International Classification Committee for Anthropogenic Soils is in the process of classifying anthropogenic soils as new orders. In reality, it is difficult to characterize anthropogenic soils because Soil Taxonomy (ST) system does not distinguish between natural and anthropogenic Entisols. On the other hand, World Reference Base for soil resources (WRB) considers human impacts on soils and contains an independent category of anthropogenic soils, which makes easier to understand anthropogenic soil characteristics than Soil Taxonomy system. A remodeled paddy field (Gasan) was selected to classify by ST and WRB. Soil samples were taken to analyze chemical and physical properties. Based on the results of the analyses, the ST system classified Gasan as coarse loamy, mixed, mesic, Aquic Udorthents while the WRB did as Stagnic Urbic Technosols (Oxyaquic, Arenic). As a conclusion, the WRB classification information of the anthropogenic provides more detail characteristics of the anthropogenic soils.

Identification of An Antibacterial Gene by Differential Display from Lipopolysaccharide-Stimulated Dung Beetle, Copris tripartitus

  • Suh, Hwa-Jin;Kim, Yeon-Ju;Bang, Hea-Son;Yun, Eun-Young;Kim, Seong-Ryul;Park, Kwan-Ho;Kang, Bo-Ram;Kim, Ik-Soo;Jeon, Jae-Pil;Hwang, Jae-Sam
    • International Journal of Industrial Entomology and Biomaterials
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    • v.17 no.2
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    • pp.223-228
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    • 2008
  • A novel beetle antimicrobial protein from stimulated Copris tripartitus and the corresponding gene were isolated in parallel through differential display-PCR and expression in Escherichia coli. To find cDNA clones responsible for bacteria resistance, the suppression subtractive hybridization and GeneFishing differentially expressed genes system were employed in the dung beetle, Copris tripartitus immunized with lipopolysaccaride. One cDNA clone from eight subtracted clones was selected through dot blot analysis and confirmed by northern blot analysis. The 516-bp, selected cDNA clone was determined by 5' and 3' rapid amplication of cDNA ends and cloned into the GST fusion expression vector pGEX-4T-1 for expression of the protein. The expressed protein was predicted 14.7 kDa and inhibited the growth of gram-negative bacteria such as Escherichia coli and Pseudomonas aeruginosa. These results implied that the expressed protein is related to immune defense mechanism against microorganism.

Simple and Sensitive Liquid Chromatography Electrospray Ionization Mass Spectrometry Method for Determination of Glycoalkaloids in Potato (Solanum tuberosum L.)

  • Kim, Jae-Kwang;Bae, Shin-Cheol;Baek, Hyung-Jin;Seo, Hyo-Won;Ryu, Tae-Hun;Kim, Jung-Bong;Won, So-Youn;Sohn, Soo-In;Kim, Dong-Hern;Kim, Sun-Ju;Cho, Myoung-Rae
    • Food Science and Biotechnology
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    • v.18 no.1
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    • pp.113-117
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    • 2009
  • A method was developed using enhanced liquid chromatography coupled with electrospray ionization mass spectrometry for the analysis and quantitation of 2 main potato glycoalkaloids, $\alpha$-chaconine, and $\alpha$-solanine, without any pre-concentration or derivatisation steps. Calibration curves generated by this technique exhibited a linear dynamic range from 0.025 to $50{\mu}g/mL$ and from 0.05 to $50{\mu}g/mL$ for $\alpha$-chaconine and $\alpha$-solanine, respectively. Matrix effects were evaluated by comparing calibration curves measured in matrix-matched and solvent-based systems. Ion suppression due to matrix effects was weak and extraction recoveries of 88 to 114% were obtained in different sample matrices spiked with analyte concentrations ranging from 15 to $35{\mu}g/mL$. Potatoes that had been genetically modified to tolerate glufosinate contained the same glycoalkaloid levels as their non-transgenic counterpart. We suggest complementing compositional comparison assessment strategy by validating quantitative analytical methods for the toxic glycoalkaloids in potato plants.

Modification of the characteristics of silkworm powder by treatment with alkaline protease

  • Kim, Sung-Kuk;Jo, You-Young;Lee, Kwang-Gill;Kim, Hyun-Bok;Kim, Yong Soon;Ju, Wan-Taek;Jung, Da-Eun;Kweon, HaeYong
    • International Journal of Industrial Entomology and Biomaterials
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    • v.31 no.1
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    • pp.30-33
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    • 2015
  • Enzymatic modification of proteins is often used to increase the biological activity of materials. Silkworm powder has been investigated as a functional food resource, but no study has been performed on its modification by commercial food enzyme. Therefore, this study aimed to determine the feasibility of such modification of silkworm powder by alkaline protease. The activity of the enzyme was confirmed using an azocasein assay. Subsequently the silkworm powder was hydrolyzed by enzymatic treatment. UV visible spectrometry showed that the supernatant of silkworm powder subjected to enzymatic treatment had a stronger absorption band than the untreated powder. SDS-PAGE electrophoresis showed that the molecular weight of silkworm powder decreased on enzymatic treatment. Thus the results indicate that commercial enzymes might be used to modify the characteristics of silkworm powder.

Potential Usage of Food Waste as a Natural Fertilizer after Digestion by Hermetia illucens (Diptera: Stratiomyidae)

  • Choi, Young-Cheol;Choi, Ji-Young;Kim, Jong-Gill;Kim, Myung-Sook;Kim, Won-Tae;Park, Kwan-Ho;Bae, Sung-Woo;Jeong, Gil-Sang
    • International Journal of Industrial Entomology and Biomaterials
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    • v.19 no.1
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    • pp.171-174
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    • 2009
  • The black soldier fly larvae are able to decompose various organic wastes such as livestock manures and food wastes. We tested whether the quality of the insect derived compost, i.e. larval feces, was comparable to that of a commercial fertilizer. The results show that the chemical composition and the growth rate of cabbages grown on the insect derived compost are virtually identical to those on the commercial fertilizer. Therefore the insect derived compost will be an ideal substitute to commercial fertilizers.

The Brassica rapa Rubber Elongation Factor Promoter Regulates Gene Expression During Seedling Growth in Arabidopsis thaliana and Brassica napus

  • Hong, Joon Ki;Lim, Myung-Ho;Kim, Jin A;Kim, Jung Sun;Lee, Seung Bum;Suh, Eun Jung;Lee, Soo In;Lee, Yeon-Hee
    • Plant Breeding and Biotechnology
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    • v.2 no.3
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    • pp.289-300
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    • 2014
  • A tissue-specific and developmentally expressed gene was isolated from Chinese cabbage (Brassica rapa L. ssp. pekinensis), designated BrREF (B. rapa Rubber elongation factor). BrREF transcripts were expressed at high levels in seedlings and at low levels in flower buds and roots. To study the activity of this promoter, the 2.2 kb upstream sequence of BrREF gene was fused to a β-glucuronidase (GUS) reporter gene and was introduced into Arabidopsis thaliana and B. napus by Agrobacterium-mediated transformation. Strong expression of GUS driven by the BrREF promoter was detected in the cotyledons and hypocotyls of transgenic plant seedlings, but GUS expression was weak in roots, excluding the root tips. GUS expression in the cotyledons and hypocotyls decreased dramatically as the seedlings matured and was not detected in the tissues of mature plants. During floral development, GUS expression was observed in immature anthers. These findings suggest that the BrREF promoter can modulate the tissue-specific and developmental expression of gene at the early stages of growth and development.

Molecular characterization of diapause-related genes in the bumblebee, Bombus ignitus (호박벌의 휴면 제어 관련 유전자 탐색 및 특성 분석)

  • Hwang, Jae-Sam;Park, In-Gyun;Yun, Eun-Young;Jung, Duck-Oung;Yoon, Hyung Joo;Lee, Sang Beom;Kim, Seong-Ryul;Lee, Joon-Ha;Kim, In-Woo;Kwon, Young Nam
    • Journal of Sericultural and Entomological Science
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    • v.50 no.2
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    • pp.189-193
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    • 2012
  • To find diapause-related genes, we were performed by differential hybridization with three types of [${\alpha}-^{32}P$]dCTP-labeled total cDNA probes synthesized from diapause-prepared, diapause-maintained and diapause-activated stage of Bombus ignitus queen. Nine individual cDNA clones were found to be differentially expressed in diapause-maintained and diapause-activated stage. Among these clones, BIDC9(BIDC ; Bombus ignitus differentially expressed clone) was analyzed through full-length sequencing and expression pattern analysis. This clone was specifically expressed in the thorax organ. The effect of Juvenile hormone analog(JHA) and $CO_2$ treatment was examined. JHA treatment induced the expression of BIDC9 cDNA clone abruptly after 4 day of treatment. $CO_2$ treatment induced also the clone after 2 day of treatment. BIDC9 cDNA was identified as Bombus ignitus diapause gene contained an open reading frame of 1376 bp encoding 255 amino acids.