• Title/Summary/Keyword: SL-176

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Molecular Docking Analysis of Protein Phosphatase 1D (PPM1D) Receptor with SL-175, SL-176 and CDC5L

  • Madhavan, Thirumurthy
    • Journal of Integrative Natural Science
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    • v.11 no.1
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    • pp.25-29
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    • 2018
  • Protein phosphatase manganese dependent 1D (PPM1D), a Ser/Thr protein phosphatise, play major role in the cancer tumorigenesis of various tumors including neuroblastoma, pancreatic adenocarcinoma, medulloblastoma, breast cancer, prostate cancer and ovarian cancer. Hence, analysis on the structural features required for the formation of PPM1D-inhibitor complex becomes essential. In this study, we have performed molecular docking of SL-175 and -176 and protein-protein docking of CDC5L with PPM1D. On analysing the docked complexes, we have identified the important residues involved in the formation of protein-ligand complex. Research concentrating on these residues could be helpful in understanding the pathophysiology of various tumors related to PPM1D.

Age and Growth of the Jedo Venus Clam, Protothaca jedoensis on the West Coast of Korea (한국 서해산 살조개 Protothaca jedoensis의 연령과 성장)

  • Kim, Ji-Hyun;Kim, Jong-Sheek;Kim, Yong-Ho;Chung, Ee-Yung;Ryu, Dong-Ki
    • The Korean Journal of Malacology
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    • v.19 no.2
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    • pp.125-132
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    • 2003
  • Age and growth of the the Jedo venus clam, Protothaca jedoensis were investigated using samples from the subtidal zone of Boryeong, Chungcheongnam- do, Korea from January to December, 1999. The relationship between shell height and ring radius in each group was expressed as a regression line. Therefore, it could be recognized that there is a correspondence in the formation of each ring. Based on the monthly variation of the marginal index of the shell, it was suggested that the annual ring mark formation occurred during the period of February to March once a year. The relationship between shell height (SH) and total weight (TW) was represented by the non-linear equation: TW = 0.0007 SH$^{2.8919}$, and also in the relationship between shell length (SL) and shell height (SH), shell height (SH) and shell width (SW) were represented by the linear equations: SL=1.1067SH+1.778, SW=0.6758SH-0.9824. Growth curves for shell height and total weight fitted to the von Bertalanffy equation were expressed as: SH$_t$ = 81.546(1-e$^{-0.176(t+0.381)}$), TW$_t$ = 227.65(1-e$^{-0.176(t+0.381)})^{2.8919}$.

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Effects of Temperature and Pressure on the Breakdown Characteristics of Liquid Nitrogen

  • Baek, Seung-Myeong;Joung, Jong-Man;Kim, Sang-Hyun
    • KIEE International Transactions on Electrophysics and Applications
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    • v.3C no.5
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    • pp.171-176
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    • 2003
  • For practical electrical insulation design of high temperature superconducting (HTS) power apparatuses, knowledge of the dielectric behavior of both liquid nitrogen (L$N_2$) and subcooled liquid nitrogen (SL$N_2$) are essential. To achieve SL$N_2$ at atmospheric pressure, cryostat was designed and constructed. By pumping up the L$N_2$ in the outer dewar, the temperature of L$N_2$ in the inner dewar at atmospheric pressure can be controlled. The breakdown characteristics of L$N_2$ in quasi-uniform and non-uniform electrical fields for temperatures ranging from 77 K to 65 K at atmospheric pressure and pressure ranging from 0.1 to 0.5 MPa were investigated experimentally. The experimental data suggested that the breakdown voltage (BDV) of L$N_2$ is both highly temperature and pressure dependent. We also carried out statistical analysis of the experimental results using the Weibull distribution. The Weibull shape parameter m for the sphere-to-plane electrodes in SL$N_2$ was estimated to be 11 to 18.

Comparative Morphology and Morphometry of the Olfactory Organ of Carassius auratus and Carassius cuvieri (Cypriniformes, Cyprinidae) (붕어 Carassius auratus와 떡붕어 Carassius cuvieri 후각기관의 형태 및 형태계측학적 비교 연구)

  • Hyun-Tae Kim;Jin-hui Lee
    • Korean Journal of Ichthyology
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    • v.35 no.3
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    • pp.171-176
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    • 2023
  • The olfactory organ of Carassius auratus and C. cuvieri was compared morphologically and morphometrically using stereomicroscopy and statistical program (SPSS version 18.0). The external morphology of the olfactory organ consists of the open semicircular anterior and posterior nostril, and nasal flap. The internal structure showed the oval rosette consisting of several lamellae arranged radiately. In statistical analysis of standard length (SL), olfactory lamellar number (LN), and SL/LN ratio between two species using independent two sample t-test and Pearson's correlation and coefficient, C. cuvieri is the longer SL than that of C. auratus and C. auratus LN (14~20) is lager than that of C. cuvieri (14~16) (P<0.001) and C. auratus LN/SL ratio (12.7±0.7%) is larger than that of C. cuvieri (8.2±0.6%). These results suggest that i) open semicircular nostrils is functional morphology to offset the boundary layer and ii) the lager LN of smaller C. auratus may be a morphological adaptation to reflect its higher olfactory dependence than C. cuvieri and iii) such interspecific difference in LN and LN/SL ratio could be applied as a new taxonomic trait for identification.

Analysis of Catalases from Photosynthetic Bacterium Rhodospirillum rubrum Sl

  • Lim, Hee-Kyung;Kim, Young-Mi;Lee, Dong-Heon;Kahng, Hyung-Yeel;Oh, Duck-Chul
    • Journal of Microbiology
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    • v.39 no.3
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    • pp.168-176
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    • 2001
  • Five different types of catalases from photosynthetic bacterium Rhodospirillum rubrum S1 grown aerobically in the dark were found in this study, and designated Catl (350 kDa), Cat2 (323 kDa), Cat3 (266 kDa), Cat4 (246 kDa), and Cat5 (238 kDa). Analysis of native PAGE revealed that Cat2, Cat3, and Cat4 were also produced in the cells anaerobically grown in the light. It is notable that only Cat2 was expressed much more strongly in response to the anaerobic condition. Enzyme activity staining demonstrated that Cat3 and Cat4 had bifunctional catalase-peroxidase activities, while Catl, Cat2, and Cat5 were typical monofunctional catalases. S1 cells grown aerobically in the presence of malate as the sole source of carbon exhibited an apparent catalase Km value of 10 mM and a Vmax of about 705 U/mg protein at late stationary growth phase. The catalase activity of Sl cells grown in the anaerobic environment exhibited a much lower Vmax of about 109 U/mg protein at late logarithmic growth phase. The catalytic activity was stable in the broad range of temperatures (30$\^{C}$-60$\^{C}$), and pH (6.0-10.0). R. rubrum S1 was much more resistant to H$_2$O$_2$in the stationary growth phase than in the exponential growth phase regardless of growth conditions. Cells of stationary growth phase treated with 15 mM H$_2$O$_2$for 1 h showed 3-fold higher catalase activities than the untreated cells. In addition, L-glutamate induced an 80-fold increase in total catalase activity of R. rubrum S1 compared with magic acid. Through fraction analyses of S1 cells, Cat2, Cat3, Cat4 and Cat5 were found in both cytoplasm and periplasm, while Catl was localized only in the cytoplasm.

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