• Korean Journal of Plant Resources
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• v.26 no.5
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• pp.613-618
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• 2013

This study was conducted to investigate the morphological characteristics of leaf and the genetic diversity of Berchemia racemosa var. magna which is only found in Anmyeon Island of South Korea. ANOVA test showed that there were significant differences among individuals within population in all 10 leaf characteristics. Average characteristics of 39 individuals were 11.8 cm in leaf length, 7.1 cm in leaf width, 1.67 in leaf index, 5.4 cm in upper 1/3 width, 6.2 cm in lower 1/3 width, 3.6 cm in petiole length, 0.19 mm in leaf thickness, 11.5 ea. in number of veins (left), 11.4 ea. in number of veins (right) and 61.7 $cm^2$ in leaf area, respectively. Except for leaf thickness (18.8%), petiole length (21.7%) and leaf area (22.0%), the coefficients of variation of most leaf characteristics were relatively low (<15.0%). A total of 50 bands was generated from 8 selected I-SSR primers. The estimates of genetic variation were 1.719 in effective number of alleles ($A_e$), 26.0% in proportion of polymorphic bands (P), 0.410 in expected heterozygosity ($H_e$) and 0.598 in Shannon's diversity index (S.I.), respectively. In spite of the small number and the limited distribution, the B. racemosa var. magna population in Anmyeon Island showed high genetic diversity.

• Korean Journal of Ecology and Environment
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• v.40 no.2
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• pp.327-336
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• 2007

This study assessed ecological health using a multi-metric fish model from 15 sites in the headwater watershed of southern Han River during June${\sim}$August 1999 and then compared the health with conventional community diversity index to figure out differences between health and diversity index. For the analysis, we adopted 10 metric IBI model for regional applications. During this survey, total number of species sampled were 24 (6 families) and varied depending on magnitude of ecological disturbance and stream order. In the mountainous streams, mean proportion of sensitive and insectivore species was composed of 91% and 56%, respectively, indicating a potential healthy conditions. However, tolerant species with 66% and omnivore species with 76% were sampled from the 2nd order stream, which was shown deterioration in the physical habitat quality. In the overall watershed, mean IBI value was 38, judging as "fair" condition by the health criteria. Values of Individual IBI were closely associated with stream order and this pattern was similar to other mountainous streams showing low chemical pollutions and disturbance. Our comparison between IBI and diversity index over the stream order showed a distinct difference; Shannon-Weaver diversity index overestimated the actual community conditions and the variation range in the 2nd order stream was greater in the diversity index. Overall data suggest that the multi-metric approach may to a useful tool for stream ecosystem management and the conventional diversity index may not effective unless the stream order is considered for the stream evaluation.

• Korean Journal of Ecology and Environment
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• v.54 no.2
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• pp.108-119
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• 2021

We aimed to develop a naturalness index for forest-dwelling birds in four national parks in Korea and to simulate the effect of species loss on this naturalness index. Five bird specialists were asked to give 112 bird species a disturbance susceptibility score (DSS), and the naturalness index was calculated based on this. The 112 bird species represented 8 orders (Cuculiformes, Piciformes, Accipitriformes, Falconiformes, Columbiformes, Caprimulgiformes, Strigiformes, and Passeriformes). DSS was the highest for Terpsiphone atrocaudata and Pitta nympha, and lowest for Pica pica, Hypsipetes amaurotis, and Streptopelia orientalis. There was a significant negative relationship between a species' population number and its DSS. Among the four national parks, Mt. Songni had the highest naturalness index, followed by Mt. Wolak, Mt. Juwang, and Mt. Wolchul. We investigated the change in biodiversity indices under four scenarios, which assumed the extinction of species with less than 5 (Scenario 1), 10 (Scenario 2), 50 (Scenario 3), and 100 individuals (Scenario 4). The results showed that although all biodiversity indices decreased as the species loss increased, they all behaved differently. Fisher's alpha diversity decreased as the number of species proportionally decreased. There was almost no change in Shannon-Wiener H' index in Scenarios 1 and 2. The naturalness index showed increased sensitivity in Scenarios 1 and 4. Our future aims are to obtain the DSS for all forest-dwelling bird species, and to adopt the naturalness index to evaluate temporal and spatial changes in biodiversity.

• Korean Journal of Microbiology
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• v.49 no.3
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• pp.282-285
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• 2013

Microbial diversities in the 300 m and 500 m deep seawaters near Goseong, Gangwon Province (South Korea), were investigated. Pyrosequencing of 16S rRNA genes of marine microbes resulted in 19,474 reads from the 300 m deep seawaters, which consisted of Alphaproteobacteria (57.41%) and Gammaproteobacteria (38.85%), and 82,806 reads from the 500 m deep seawaters, which consisted of Gammaproteobacteria (99.64%) mostly. Rhodobacterales (57.31%) were dominant in the 300 m deep seawaters, but Alteromonadales (45.65%) and Oceanospirillales (34.61%) were dominant in the 500 m deep seawaters. On the bases of operational taxonomic units and diversity indexes (Shannon and Simpson), biodiversity of marine bacteria in the 500 m deep seawaters was shown to be higher than that in the 300 m deep seawaters.

• Journal of Forest and Environmental Science
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• v.30 no.3
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• pp.253-258
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• 2014

The study attempts to assess the status, distribution, conservation and use value of Medicinal and Aromatic Plant (MAPs) in the Sagarmatha National Park. Altogether 62 species of MAPs belonging to 47 genera and 33 families have been recorded in the study area. 10 species, belonging to 9 families are categorized as the potential species. Out of the these species, most potential in local but threatened species are Allium hypsistum Stearn, Cordyceps sinensis Sacc, Dactylorhiza hatagirea Soo, Nardostachys grandiflora DC, Aconitum orochryseum, Ephedra gerardiana Wall. Ex. Stapf, Swertia multicaulis D. Don, Picrorhiza scrophulariflora Penne, Rheum australe. D. Don, Malva verticillataL and Swertia pedicallata Benerji. By analysis of data using Simpson's diversity index (SI) and Shannon weaver function (H'), there was high diversity (more heterogeneous) MAPs species composition in the Manjo Gate to Large Dobhan. (0.98349). Less diversity (less heterogeneous) MAPs species composition was in Tyanboche to Pangoche (0.90419). Similarly, the Shannon weaver function shows that in plots laying out in Mongla to Phorche are evenly distributed than others However, higher MAPs species (i.e., 31) was found in the way of Manjo Gate to Larja Dobhan than others.

• Korean Journal of Environment and Ecology
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• v.11 no.4
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• pp.450-461
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• 1998

To investigate the plant community structure of Paekdam-Valley in Soraksan National Park, fifty-two plots have been set up and surveyed. By DCA ordination technique, the plant communities were classified into fkve community types, which were Pinus densiflora community and Q. mongolica community. It was supposed that Q. serrata community change to C. laxiflora community. It seemed that P. densiflora community, deciduous broad-leaved mixed forest and Q. serrata community would not be replace by another woody species. And it seemed that C. laxiflora community succeeded to Q. serrata community, so it was similar to the typical ecological succession of natural forest in the middle temperate regions. The range of Shannon's diversity index was 0.9827~1.2946(Unit area : 400m$^2$) and that was over another Korean National Parks area relatively.

• Journal of the Korean Society for information Management
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• v.33 no.1
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• pp.7-32
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• 2016

This study has measured interdisciplinarity using a topic modeling, which automatically extracts sub-topics based on term information appeared in documents group unlike the traditional top-down approach employing the references and classification system as a basis. We used titles and abstracts of the articles published in top 20 journals for the past five years by the 5-year impact factor under the category of 'Information & Library Science' in JCR 2013. We applied 'Discipline Diversity' and 'Network Coherence' as factors in measuring interdisciplinarity; 'Shannon Entropy Index' and 'Stirling Diversity Index' were used as indices to gauge diversity of fields while topic network's average path length was employed as an index representing network cohesion. After classifying the types of interdisciplinarity with the diversity and cohesion indices produced, we compared the topic networks of journals that represent each type. As a result, we found that the text-based diversity index showed different ranking when compared to the reference-based diversity index. This signifies that those two indices can be utilized complimentarily. It was also confirmed that the characteristics and interconnectedness of the sub-topics dealt with in each journal can be intuitively understood through the topic networks classified by considering both the diversity and cohesion. In conclusion, the topic modeling-based measurement of interdisciplinarity that this study proposed was confirmed to be applicable serving multiple roles in showing the interdisciplinarity of the journals.

• Journal of Life Science
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• v.18 no.7
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• pp.907-911
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• 2008

Radish (Raphanus sativus L.) is one of very important crop plants in the world. It is very important to determine hybrid seed quality in the production of hybrid Brassica vegetable seeds to avoid unacceptable contamination with self-inbred (sib) seeds. The allozyme for evaluating seed purity in a commercial $F_1-hybrid$ radish cultivar is demonstrated. Three hundred sixty seeds from the male and female harvest were subsequently screened for seed purity using 27 isozyme loci. Especially, F1 hybrids of radish, Per-1 ($aa{\times}bb$), Lap-1 ($aa{\times}bb$), Est-1 ($aa{\times}bb$) were presented clear hybrid bands. Est-1 locus revealed that 15 (8.3%) seeds from the female harvest and 26 (14.4%) seeds from the male harvest were sibs. It maintains higher than average level of genetic diversity compared with their correspondent parents. Shannon's index of phenotypic diversity (I) of hybrids was the highest of all accessions (R. sativus L. cv. Daepeng, R. sativus L. cv. Backza, and their hybrids). The allozyme may lead to a better insight into the hybrid seed purity.

• Microbiology and Biotechnology Letters
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• v.43 no.1
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• pp.65-78
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• 2015

The bacterial diversity of the rhizosphere soil of S. japonica native to Suncheon bay was analyzed. Ninety two strains showing different morphological characteristics were isolated from the soils around the community of S. japonica. Bacterial diversity and distributions were studied by phylogenetic analysis of the partial 16S rDNA sequences. Ninety two strains were partially sequenced and analyzed phylogenetically. These strains were composed of 5 phyla firmicutes (56.5%), gamma-proteobacteria (29.3%), alpha-proteobacteria (5.4%), actinobacteria (5.4%), bacteroidetes (3.3%) and Shannon’s diversity index (H') were different from each of sampling sites (1.675, 1.924 and 2.04). Eleven isolates were presumed to be novel species candidates based on similarity analysis of the 16s rRNA gene sequences. Overall, Firmicutes and gamma-proteobacteria of the rhizosphere soil of S. japonica showed a high diversity.

• Korean Journal of Plant Resources
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• v.19 no.1
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• pp.189-195
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• 2006

We investigated the genetic variation in Stewartia koreana Nakai by examining 61 I-SSR amplicons in 120 individuals distributed among six natural populations in Korea. The overall percentage of polymorphic I-SSR amplicons was 81.9% and mean number of amplicons per I-SSR primer was 12.2. Levels of genetic diversity within 6 populations were similar each other[Shannon's Index $0.358{\sim}0.467$(mean: 0.407)]. The Mt. Obong population had the highest level of genetic diversity and was most distinctive from the other populations. Most variation existed among individuals within population(88.2%). Genetic differentiation among populations(${\phi}_{ST}$) was 0.118. The UPGMA dendrogram based on the genetic distance failed in showing decisive geographic relationships.