• Korean Journal of Environment and Ecology
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• v.12 no.2
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• pp.138-146
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• 1998

Ten plots were established to study the vegetation structure of the Songinbong virgin forest in Ullungdo. It was classified into three communities Fagus crenata var. multinervis commnunity, Acer okamotoanum-Fagus crenata var. multinervis community, and Acer okamotoanum community. Shannon's diversity indicies of this area were not high(0.5150~0.8437), due to the geographical and vegetational characteristics. Considering the community structure(importance value, distribution of DBH class, and so on), the vegetation of the Songinbong virgin forest are thought to be stable continuously. With the analysis of plant growth type, it was presumed that Acer okamotoanum have increased after artificial disturbances in this area where Fagus crenata var. multinervis had been dominanat.

• The Korean Journal of Mycology
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• v.40 no.1
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• pp.7-10
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• 2012

Endophytic fungi were isolated from the roots of halophytes, Suaeda japonica and Carex scabrifolia in the Suncheonbay. The ITS region in rDNA of 15 endophytic fungal strains were amplified using PCR with universal primers ITS1 and ITS4, and those amplified fragments were sequenced. Based on ITS sequence, five fungal genera were identified in S. japonica and seven fungal genera were identified in C. scabrifolia. The Shannon's diversity index (H') of endophytic fungi isolated from S. japonica and C. scabrifolia was 1.561 and 1.889, respectively. In phylogenetic analysis, it was shown that Ascomycota and Pezizomycotina was widely distributed both in S. japonica and C. scabrifolia. Also, Sordariomycetes, Dothideomycetes and Eurotiomycetes were shown to be distributed in these halophytes used in this experiment.

• Journal of Korean Society of Forest Science
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• v.102 no.4
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• pp.560-565
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• 2013

Population genetic structure and diversity of Ulmus davidiana var. japonica in South Korea were studied using ISSR markers. A total of 45 polymorphic ISSR amplicons were cropped from 7 ISSR primers and 171 individuals of 7 populations. The average of effective alleles and the proportion of polymorphic loci were 1.5 and 89% respectively. The Shannon's diversity index (I) was 0.435 and the expected heterozygosity from the frequentist's method ($H_e$) and the Bayesian inference (hs) were 0.289 and 0.323 respectively. From AMOVA, 4.2% of total genetic variation in the elm populations was explained with the difference among populations (${\Phi}_{ST}=0.042$) and the other 95.8% was distributed within populations. The ${\theta}^{II}$ value by Bayesian method which was comparable to the FST was 0.043. So the level of genetic diversity in the elm populations was similar to that in Genus Ulmus and the level of genetic differentiation was lower than that of others. No population showed a significant difference in the population-specific fixation indices (average of $PS-F_{IS}=0.822$) or the population-specific genetic differentiations (average of $PS-F_{ST}=0.101$). Seven populations were allocated into 3 groups in the UPGMA and the PCA, but the grouping patterns were different. Also, we could not confirm any geographic trend from Bayesian clustering.

• Korean Journal of Plant Resources
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• v.25 no.4
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• pp.407-415
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• 2012

Pinus pumila, which occurs in the northeast Asia, is found limitedly in Daecheongbong area of Mt. Seorak in the South Korea. This population was chosen to study spatial pattern, genetic diversity and spatial genetic structure. There were 48 polymorphic and 30 monomorphic I-SSR markers. A total of 65 individuals which distributed in the study site (40 m ${\times}$ 70 m) showed weakly aggregate distribution (Aggregate Index = 0.871). A total of 40 genets were observed from 65 individuals through I-SSR genotype comparison. Proportion of distinguishable genotype (G/N), genotype diversity (D) and genotype evenness (E) were 61.5%, 0.977 and 0.909, respectively. In spite of the small number and the limited distribution, Shannon's diversity index (I = 0.567) was relatively high as compared with those of other plant species. Spatial autocorrelation using Tanimoto's distance showed that the genetic patch was established within 12 m. Based on Mantel tests, there was relatively low correlation between genetic distance and geographic distance. Therefore, it seems the P. pumila population was formed by many parent trees in early stage. For ex situ genetic conservation of P. pumila, the sampling strategy is efficient at least above 12 m between individual trees.

• Journal of Korean Society of Forest Science
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• v.103 no.1
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• pp.59-64
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• 2014

This study describes analysis of genetic diversity and spatial genetic structure of Korean poplar (Populus koreana Rehder) in Mt. Odae using I-SSR markers. P. koreana is a deciduous broad-leaved tree species that primarily grows in the alpine valleys of China, Russia and North Korea. In South Korea, P. koreana is found limitedly in Gangwon province. Especially, the population in Mt. Odae is located on the southern limit line, its importance is emphasized from the genetic resource conservation perspective. The Shannon's diversity (I=0.230) and the expected heterozygosity (He=0.151) were relatively low as compared with those of other plant species. Spatial autocorrelation analysis using Tanimoto's distance showed that the genetic patch was founded within 400 m. It is suggested that individual trees for ex situ conservation should be sampled with a minimum distance of 400 m between trees.

• Journal of Ecology and Environment
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• v.48 no.3
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• pp.233-246
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• 2024

Background: In this research work, epilithic communities of diatoms in macrophytes are listed and described to evaluate the ecological conditions of the surface waters of the Chipoco River, whose basin has been exploited for agricultural and mining purposes, degrading natural ecosystems. The diatoms studied are found in calcareous tufa deposits developed in swampy environments where little of their benthic microbiota has been studied, despite the regional relevance of these calcareous formations within the manganese mining district. To describe the diatoms and evaluate the ecological condition of the surface waters, the Chipoco River was divided into three sectors (North, Center, and South) collecting a total of 15 samples along 10 km. For the taxonomic identification of diatoms, scanning electron microscopy techniques, consultations with specialists and specialized literature were used. To evaluate the ecological conditions of the Chipoco River, the linear correlation coefficient was used, where the relationships between diatom species and environmental variables were evaluated. Likewise, species diversity was determined by applying the Shannon-Wiener index and Simpson's dominance value (D) was calculated to detect diversity impoverishment processes. Results: Ten genera of diatoms were identified in bryophytes of the species Plagiomnium cuspidatum that grow on the banks of said river. The linear correlation coefficient indicated that physicochemical characteristics such as total dissolved solids, temperature, and calcium, and hydrochemical characteristics of the water intervene in the distribution and abundance of four diatoms Rhoicosphenia abreviate, Epithemia turgida, Calloneis bacillum and Achanthidium minutissimum in the different sectors studied. The Shannon-Wiener diversity indices and Simpson's dominance show that there is greater diversity and marked dominance of diatoms in the northern sector compared to the central and southern sectors. Conclusions: Agricultural and mining activities and the poor sanitary infrastructure of human settlements have caused the Chipoco River to have poor ecological quality.

• Journal of Korean Society of Forest Science
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• v.99 no.5
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• pp.736-743
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• 2010

This study examined the ecological attributes of classified forest community by cluster analysis in the mixed forest of Mt. Seokbyung Experimental Forest of Gangwon-Do. The vegetation data were collected in randomly established 51 sample plots (2.04 ha) and analysis adopted the cluster analysis, importance value index, and Shannon's diversity index. Main results were as follows; 1) the study area was classified into 4 clusters (A, B, C and D). 2) The cluster A was dominated by Pinus densiflora with an importance value of 71.6%. The most dominant species in the cluster B and cluster C were Larix leptolepis (57.1%) and Quercus mongolica (40.2%), respectively. Finally, The cluster D was dominated by P. densiflora (30.6%) and Q. mongolica (31.0%) with the mixed forest. 3) In the P. densiflora community (cluster A), distribution of DBH class showed a reverse J-shaped curve. In the L. leptolepis community (cluster B), individuals of dominant species had the bell-shaped distribution. Oak species indicated uniform distribution of DBH class (under 25 cm) in the mixed P. densiflora - Q. mongolica community (cluster D). 4) The species diversity index of the communities in descending order were: Pinus densiflora - Q. mongolica community > Larix leptolepis community > Pinus densiflora community > Quercus mongolica community.

• Journal of Life Science
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• v.17 no.6 s.86
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• pp.805-810
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• 2007

Inter simple sequence repeat (ISSR) markers were performed in order to analyse the phylogenetic relationships of eight Hypericum electum populations in Korea. The six primers were produced 37 reproducible ISSR bands. Analysis of ISSR from individual plants of Korean H. erectum resulted in 22 polymorphic bands with 59.5%. Across populations, the mean number of alleles per locus was 1.348 and Shannon's information index was 0.203.Population Mt. Gyeryong had the highest expected genetic diversity (0.175) among all populations. When species were grouped by eight populations, within group diversity was 0.140 (Hs), while among group diversity was 0.472 (G$_{ST}$) on a per locus basis. The estimated gene flow (Nm) for H. erectum was very low (0.561). It is suggested that reproductive isolation by the isolation of geographical distance among H. electum populations and genetic drift may have played roles in shaping the population structure of this species. In phonetic tree, all populations were well separated from each other. Thus, ISSR markers are very effective in classifying natural population levels of genus Hypericum in Korea.

• Journal of Forest and Environmental Science
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• v.26 no.2
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• pp.117-129
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• 2010

The present study was undertaken in moist temperate forest of Mandal-Chopta area in the Garhwal region of Uttarakhand, India. The aim of the present study was to assess the physical properties of soils in relation to the forest structure and composition. Twelve forest types according to the altitude, slope aspect and species compositions were selected for the study. Physical properties of soil i.e., soil colour, soil texture (per cent of sand, silt and clay), moisture content, water holding capacity, porosity, bulk density (gm/$cm^3$) and void ratio were analyzed for three different depths viz., (i) 'upper' (0-10 cm), (ii) 'middle' (11-30 cm) and (iii) 'lower' (31-60 cm) in all the selected forest types. Phytosociological and diversity parameters viz. total basal cover ($Gha^{-1}$), stem density ($Nha^{-1}$), tree species richness, Simpson concentration of dominance and Shannon-Wiener diversity index were also calculated for each forest type. This study also provides the comparisons between the results of physical analysis of the present study with numerous other previous studies in the temperate Himalayan region of the Uttarakhand.

• Journal of Korean Society on Water Environment
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• v.31 no.6
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• pp.610-618
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• 2015

This study was conducted to find out the influence of sample size (accumulated survey areas) on the seven biological indices of benthic macroinvertebrates. BMI, the index similar to Zeilika-Marvan’s saprobic index, tended to be independent on the variations of sample size. The other indices (Shannon-Weaver’s diversity, Margalef’s richness, Menhinick’s richness, Pielou’s evenness, and Lenat’s EPT index) showed the considerable variations along with the increase of sample size and environmental conditions. To get the appropriate index values, it should be sampled at least 6 replicates more based on 30×30cm Surber sampler. In addition, the habitat heterogeneity index of benthic macroinvertebrates suggested in this study, it will be able to be used for evaluating the heterogeneity of habitats.