• Title/Summary/Keyword: Rice Seeds

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Genomics-based Sensitive and Specific Novel Primers for Simultaneous Detection of Burkholderia glumae and Burkholderia gladioli in Rice Seeds

  • Lee, Chaeyeong;Lee, Hyun-Hee;Mannaa, Mohamed;Kim, Namgyu;Park, Jungwook;Kim, Juyun;Seo, Young-Su
    • The Plant Pathology Journal
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    • v.34 no.6
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    • pp.490-498
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    • 2018
  • Panicle blight and seed rot disease caused mainly by Burkholderia glumae and Burkholderia gladioli is threatening rice cultivation worldwide. The bacteria have been reported as seed-borne pathogens from rice. Accurate detection of both pathogens on the seeds is very important for limiting the disease dissemination. Novel primer pairs targeting specific molecular markers were developed for the robust detection of B. glumae and B. gladioli. The designed primers were specific in detecting the target species with no apparent cross-reactions with other related Burkholderia species at the expected product size. Both primer pairs displayed a high degree of sensitivity for detection of B. glumae and B. gladioli separately in monoplex PCR or simultaneously in duplex PCR from both extracted gDNA and directly preheated bacterial cell suspensions. Limit of detection was as low as 0.1 ng of gDNA of both species and $3.86{\times}10^2cells$ for B. glumae and $5.85{\times}10^2cells$ for B. gladioli. On inoculated rice seeds, the designed primers could separately or simultaneously detect B. glumae and B. gladioli with a detection limit as low as $1.86{\times}10^3cells$ per rice seed for B. glumae and $1.04{\times}10^4cells$ per rice seed of B. gladioli. The novel primers maybe valuable as a more sensitive, specific, and robust tool for the efficient simultaneous detection of B. glumae and B. gladioli on rice seeds, which is important in combating rice panicle blight and seed rot by early detection and confirmation of the dissemination of pathogen-free rice seeds.

Effects of Priming and Growth Regulator Treatment of Seed on Emergence and Seedling Growth of Rice

  • Lee, Suk-Soon;Kim, Jae-Hyeun;Hong, Seung-Beom
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.44 no.2
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    • pp.134-137
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    • 1999
  • An experiment was carried out to determine the effects of priming and growth regulator treatment of seeds on the emergence and seedling growth of rice, Oryza sativa L. (cv. 'Ilpumbyeo'). Normal seeds were primed in a -0.6 MPa polyethylene glycol solution at 15$^{\circ}C$ for four days with air-bubbling. Then both primed and non-primed seeds were soaked in water, 100 ppm GA$_3$, 2 ppm ABA, and 10 ppm kinetin solutions for 24 hours. The seeds were planted in soil at 3 and 5 cm depths and allowed to germinate in a growth cabinet at 2$0^{\circ}C$. Generally, the emergence rate at the 3 cm seeding depth was higher and emerged faster compared with the 5 cm seeding depth. The emergence rate of primed seeds was higher and emerged faster compared to non-primed seeds. GA$_3$ and kinetin treatments were the most effective to improve the emergence rate of non-primed seeds. Coleoptile length at the 5 cm seeding depth was longer than that at the 3 cm seeding depth. Leaf number, plant height, and root length of primed seedlings were higher compared with non-primed seeds. GA$_3$ promoted the elongation of plant height and mesocotyle length.

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Distribution of Seed-borne fungi on Rice Seeds Affecting Rice Grain Qualify

  • Shim, Hong-Sik;Hong, Sung-Jun;Park, Hyo-Won;Kim, Yong-Ki;Yeh, Wan-Hae
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.119.2-120
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    • 2003
  • Seed-borne fungal pathogens on rice seeds were investigated in order to evaluate their effect on rice grain quality. Rice seeds of two cultivars, Ilmibyeo and Daesanbyeo were collected from 27 areas of Korea and the fungal parasites on seeds were isolated by using a blotter method. Isolation frequency and number of species were varied from collection areas of seed samples. A total 13 species of fungi were identified from the seeds. Among them, Altemana alternata was the most frequent over the country. Bipoiaris oryzae most commonly from Gyeongbuk and Jeonbuk, Alternaria padwickii from Jeonbuk, and Nigrospora oryzae from Choongnam. However Bipolaris. oryzae, Alternaria padwickii, and Nigrospora oryzae were the most frequently isolated fungi from Gyeongbuk and Jeonbuk, and Chungnam, respectively. B. oryzae, A. alternata, A. padwickii, and N. oryzae were dominants on Ilmibyeo showing 10.3%, 10.2%, 5.2%, and 5.2% infection rate, respectively. While, N. oryzae, A alternata, and Cladosporium sp. were most frequently isolated fungi from Deasanbyeo revealing 15.1%, 9.6%, and 7.5% infection rate, respectively. These fungi inhabiting on hulls or endosperms of rice seed might be considered as potential factors decreasing rice grain quality. Further investigation of the fungi on grain rice quality are undergoing.

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A Research on None Covering of Top-soil for Rice Seedling Nursery for Sparse Machine Transplanted Rice (벼 소식재배를 위한 무복토 육묘 연구)

  • Park, K.H.;Ryu, H.Y.
    • Journal of Practical Agriculture & Fisheries Research
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    • v.21 no.2
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    • pp.77-86
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    • 2019
  • To determine none top soil covering in rice seedling nursery method for the sparse machine transplanting, four different sowing methods were tested. Shoot and root length, fresh weight, leaf number and color using leaf color chart(LCC) and SPAD were collected as the data comparison of methods. The seedling height showed the highest growth according to the conventional (230g seed rate of pre-emerged seeds and top-soil covering) > high sowing density 1 (290g seed rate of pre-emerged seeds and top-soil covering) ≥ high sowing density 2(290g seed rate of pre-emerged seeds and none top-soil covering) > high sowing density 3(290g seed rate of iron-coated seeds and none top-soil covering). There was any statistical difference between groups in root length, leaf number, LCC, and SPAD values. Thus, a high sowing density of 290g for rice nursery seedling box was recommended to the sparse machine transplanting in rice cultivation with the none top-soil covering method, enabling convenient handling in transportation and machine transplanting work.

Optimum Water Potential, Temperature, and Duration for Priming of Rice Seeds

  • Lee, Suk-Soon;Kim, Jae-Hyeun;Hong, Seung-Beom;Kim, Min-Kyeong;Park, Eui-Ho
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.43 no.1
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    • pp.1-5
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    • 1998
  • Experiments were carried out to find out the optimum water potential, temperature, and duration for the priming of rice seeds, Oryza sativa L. (cv. Ilpumbyeo) for better germination at sub-optimal temperatures. Seeds were primed in 0, -0.2, -0.4, -0.6, -0.8, and -1.0 MPa PEG (polyethylene glycol) solutions at $25^{\circ}C$. The optimum water potential for seed priming, the highest water potential at which rice seeds did not germinate, was -0.6 MPa. To find out optimum priming temperature and duration rice seeds were primed in -0.6 MPa PEG solution and 0 MPa (water as a control) for various durations at 15 and $25^{\circ}C$ and the seeds were germinated at 17, 20, and $25^{\circ}C$. Considering germination rate and speed, the optimum priming time in water (0 MPa) was 4 days at 15$^{\circ}C$ and 1 day at $25^{\circ}C$, while 4 days was the optimum priming time in a -0.6 MPa PEG solution, regardless of the priming temperature. Priming reduced the actual time of germination, especially at sub-optimal temperatures. Priming did not affect germination rate in -0.6 MPa PEG solution at 15$^{\circ}C$, but overpriming reduced the final germination rate in water at 15$^{\circ}C$ and in -0.6 PEG solution at $25^{\circ}C$. Total sugars and $\alpha$-amylase activity induced during the seed priming were negatively correlated with the final germination rate and there was no noted relationship with the speed or uniformity of germination.

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Seed Germination and Effect of Water Depths on Seedling Establishment of Iron-coated Rice Seeds (벼 철분코팅종자의 발아 특성 및 담수깊이에 따른 초기입모 영향)

  • Kim, Sang-Yeol;Park, Sung-Tae;Seo, Jong-Ho;Hwang, Chung-Dong;Bae, Hyun-Kyung;Oh, Myung-Kyu
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.62 no.1
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    • pp.9-15
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    • 2017
  • Germination characteristics, seedling emergence, and early seedling growth of iron-coated rice seeds, cultivars Daebo and Samdeokbyeo, under different water depths were compared with those of non-coated seeds (control) and the results evaluated to obtain basic information for establishing stable seedlings in direct water seeding. The total germination percentage of the two seed treatments was similar, but iron-coated seeds had slightly faster germination and shorter mean germination time than non-coated seeds. Water absorption rates of iron-coated seeds were lower than that of non-coated seeds during seed germination. The germination percentage of the two iron-coated rice seed cultivars showed a significant decline of 15-22% after one year of storage under natural conditions. The seedling emergence percentage and uniformity of the two rice cultivars were significantly higher in the iron-coated seeds at 1-13 cm water depths but the percentage of floating seedlings was lower in iron-coated seeds than in non-coated seeds. The iron-coated seeds had a high seedling emergence percentage of 91.3-93.3% at all flooding depths whereas the non-coated seeds had a significantly low seedling emergence percentage of 57.7-71.7% at a water depth of 13 cm. Moreover, the shoot dry weight and seedling health score of iron-coated seeds were significantly higher than those of non-coated seeds, while root dry weights were similar in iron-coated and non-coated seeds, regardless of water depth. These results suggest that iron-coated seeds are more appropriate for stable seedling establishment in direct water seeding than are non-coated seeds.

Comparison of Rice Growth and Yield in Different Direct Seeding Methods (벼 직파 유형별 생육 및 수량 비교 연구)

  • Park, K.H.;Park, S.T.
    • Journal of Practical Agriculture & Fisheries Research
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    • v.19 no.1
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    • pp.119-128
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    • 2017
  • The field trial was performed to evaluate the rice growth and yield in different direct seeding methods. The required time for seed emergence was for 8~ 9days in the tested direct seeding methods and there was high in seedling establishment according to wet hill-seeding with iron-coated seeds> wet hill-seeding with soil coverage>water seeding with iron-coated seeds and water seeding with pregerminated seeds as the conventional treatment. The rice plant height was taller in wet hill-seeding methods than that of water seeding with broadcasting method but there was not significant difference in terms of statistical analysis at 75day after seeding except the water seeding with pregerminated seeds. The growth of tiller number in the rice plant was highest in water seeding with iron-coated seeds. The milled rice yield was highest in water seeding with iron-coated seed being with 6.4t/ha and percentage of head rice was the highest in wet hill-seeding and water seeding with iron-coated seeds.

Seed Gravity, Germination, and Optimum Seeding Rate for Machine Transplanting in Colored Rice Varieties (유색벼의 품종별 종자 비중, 발아 특성 및 기계이앙 육묘시 적정 파종량)

  • Kim, Sang-Yeol;Han, Sang-Ik;Oh, Seong-Hwan;Lee, Jong-Hee;Park, No-bong;Kwon, Oh-Deog;Kwon, Young-Up
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.60 no.3
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    • pp.282-292
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    • 2015
  • Seeds of colored rice generally have high anthocyanin and flavonoid content but some cultivars have low seed germination rate. This defect poses unstable seedling establishment in nursery bed. The seed gravity variations of 10 colored rice varieties and its effect on germination, seed soaking duration and their optimum seeding rates for seedling raising in machine transplanting were investigated in the experiment. Based on seed gravity distribution of the 7 black- and 3 red-colored rice varieties at three levels of seed gravity (1.0<, 1.0~1.06, 1.06>), the black colored seeds such as Josaengheugchal and Sinmyungheugchal had high amount of specific gravity of below 1.0 ranging from 86~ 96%, while they had only 3~13% of seeds in specific gravity above 1.06. Sintoheugmi, Heugjinju, Heugnam, Heugkwang had various mass of seeds, showing 29~44% for specific gravity of below 1.0, 24~39% for 1.0~1.06 and 25~45% for above 1.06. On the other hand, the red colored rice such as Hongjinju, Jeogjinju and Geonkanghongmi had high percentage of specific gravity of above 1.06 with 84~86% while they had only 9~12% of specific gravity below 1.0 similar to Ilmibyeo of noncolored rice. The black colored seed generally showed low germination percentage, slow germination speed and long mean germination time, and low water absorption rate as compared with seed of the red colored rice which was similar to those of Ilmibyeo used as a control cultivar. The black colored seeds took 2~4 days longer seed soaking duration than the red colored rice before germination. This was related to high seed amount of specific gravity below 1.0 in black colored rices. The high amount of seed gravity above 1.06 in the colored rice seeds was positively correlated with percentage of germination, germination speed and mean germination time, ripened grain ratio and water absorption. Seed gravity distribution effect were less pronounced between back- and red- colored seeds in seedling emergence. The black colored rice has slightly lower normal seedling emergence rate than the red colored rice and Ilmibyeo in the seedbed soil due to high percentage of ungerminated seed. Normal seedling emergence rate of the black colored rice in the seedbed was 75.2~82.2% for 10-day old seedling and 85.3~ 90.9% for 30-day old seedling which was lower by 4.5~ 8.0% and 0~3.3%, respectively, than the red colored rice. Based on the normal seedling number per tray of Ilmibyeo for seeding rate of 10-day and 30-day old seedlings, the recommended seeding rate of black colored rice is 200~ 220g seeds for the 10-day old seedling and 110~130g for the 30-day old seedling in transplanting rice while the seeding rate of the red colored rice was 220g seeds for the 10-day old seedling and 130g for the 30-day old seedling.

Effect of Seed Coating with Polymers on Seed Vigour and Seedling Stand in Direct Seeded Rice

  • Song, Dong-Seog;Lee, Sheong-Chun
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.43 no.4
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    • pp.214-222
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    • 1998
  • These experiments were conducted to investigate water uptake, electrical conductivity, germination percentage, seedling growth, and seedling establishment rate in direct seeding cultivation of rice. The rice seeds of six japonica type varieties were coated with 12 kinds of polymers in a standard concentration of 0.2% using seed coating machine. The water absorption of the polymer-coated seeds under saturation conditions was not different among varieties, and was the highest in kulcel, maltrin, and waterlock on the polymer-coated seeds. The electrical conductivity with waterlock (55.0 $\mu scm^{-1}g^{-1}$) was higher than the control plot (45.6 $\mu scm^{-1}g^{-1}$) and other treatments. The germination of the polymer-coated seeds was 95.9% at control plot, 92.7% at low temperature and 35.7% at high temperature. The total dry weight of seed decreased in the order of low temperature, control plot, and high temperature, and was effective in pvp (polyvinyl pyrrolidone), opadry, and sacrust. The seedling establishment rate in direct seeding cultivation ranged from 74.9 to 81.0% in flooded paddy surface, and ranged from 64.7 to 76.6% in dry paddy. In both cases, it decreased in the order of early, medium and medium-late varieties, but was enhanced in daran 8600, sepirect, and sacrust. According to this study the recommended polymers for direct seeding cultivation of rice are daran 8600, sepirect, and sacrust.

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Characteristics of Seedling Establishment and Yield of Platycodon grandiflorus by Ridge Width and Mulching Materials (이랑폭과 피복재에 따른 도라지의 입모율 및 수량특성)

  • Cho, Young-Son
    • Korean Journal of Medicinal Crop Science
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    • v.19 no.4
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    • pp.233-237
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    • 2011
  • This study was carried out to investigate the seedling establishment and yield of direct-sown Platycodon grandiflorus seeds cultured by three ridge width, 0.4, 0.8, and 1.2 m and four mulching materials, rice straw, rice bran, black plastic film, and no mulching in upland. Seedling establishment rate (70%) was the highest in rice straw mulched plot of 500 seeds/$m^2$ sowed and root yield after one year was also the highest in rice straw mulched treatment and followed by rice bran, no mulching, and black plastic film treatment. In this result, ridge width 120cm and rice straw mulching combined treatment was best for getting the highest seedling establishment ratio and seedling numbers per area. However, ridge width and mulching materials should be considered soil moisture content and weed population for saving labor cost.