• Title/Summary/Keyword: Replication Study

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Actin-related protein BAF53 is essential for the formation of replication foci

  • Kwon, Su-Jin;Kwon, Hyock-Man
    • Animal cells and systems
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    • v.16 no.3
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    • pp.183-189
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    • 2012
  • It has been suggested that chromatin is organized into the stable structures that provide fundamental units of chromosome architecture in interphase mammalian cells. The stable structures of chromatin can be visualized as replication foci when replicating DNA is labeled with thymidine analogs. Previously, we showed that the chromosome territory expanded after BAF53 knockdown. In this study, we found that BAF53 is required for the formation of replication foci. DNA replication was not impaired in BAF53 knockdown cells, suggesting that the decrease in the number of replication foci is due to disintegration of replication foci, but not suppression of DNA replication. The attractive forces that maintain structural integrity of replication foci could be disrupted by BAF53 knockdown, and it may be responsible, at least in part, for the expansion of chromosome territories after BAF53 knockdown.

Inhibitory Effects of Extracts of Paralichtys olivaceus on DNA replication at the Level of Initiation (Paralichthys olivaceous 추출물에 의한 CNA 복제 개시 단계에서의 억제 효과)

  • 이지현;임영해;이수복;김동규;김동선;박남규;정준기;김남득
    • Journal of Life Science
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    • v.11 no.4
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    • pp.371-378
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    • 2001
  • The effects of the RM 60 series on DNA replication systems were examined by using simian virus 40 (SV40) DNA replication system in vitro. The RM 60 series inhibited the DNA replication in the initiation step rather than in the elongation step. Polymerase$\alpha$-primase activity and toposiomerase I activity study were performed subsequently, the RM 60 seies increased the polymerase $\alpha$-primase activity in a low dose, but decreased the activity in a higher dose. The topoisomerase I activity was inhibited by the RM 60 series. This result suggests that the RM 60 series might inhibit some molecules which are required to establish replication forks during the initiation step of the DNA replication.

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Exogenous JH and ecdysteroid applications alter initiation of polydnaviral replication in an endoparasitoid wasp, Cotesia plutellae (Braconidae: Hymenoptera)

  • Park, Bok-Ri;Kim, Yong-Gyun
    • BMB Reports
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    • v.44 no.6
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    • pp.393-398
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    • 2011
  • Polydnaviruses are a group of double-stranded DNA viruses and are symbiotically associated with some ichneumonoid wasps. As proviruses, the replication of polydnaviruses occurs in the female reproductive organ at the pupal stage. This study analyzed the effects of two developmental hormones, juvenile hormone (JH) and ecdysteroid, on the viral replication of Cotesia plutellae bracovirus (CpBV). All 23 CpBV segments identified contained a conserved excision/rejoining site ('AGCTTT') from their proviral segments. Using quantitative real-time PCR based on this excision/rejoining site marker, initiation of CpBV replication was determined to have occurred on day 4 on the pupal stage. Pyriproxyfen, a JH agonist, significantly inhibited adult emergence of C. plutellae, whereas RH5992, an ecdysteroid agonist, had no inhibitory effect. Although RH5992 had no effect dose on adult development, it significantly accelerated viral replication. The results of immunoblotting assays against viral coat proteins support the effects of the hormone agonists on viral replication.

A Fault-Tolerant Mobile Agent Framework and Replication Study for Internet Applications (인터넷 응용을 위한 고장 감내 이동 에이전트 프레임워크와 레플리케이션 연구)

  • Park, Kyeong-mo
    • The KIPS Transactions:PartA
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    • v.10A no.6
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    • pp.701-708
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    • 2003
  • This paper addresses the issue involved in dependability of distributed mobile agents in the Internet environment. We propose an architectural framework for the Internet applications making mobile agents into fault-tolerant. The replication of agents and data is of great importance to achieve fault tolerance in distributed systems over the Internet. This research focuses on the replication component for the proposed fault-tolerant mobile agent framework. We present and analyze the performance results obtained when doing simulation study on the effects of the degree of replication, the active and passive replication strategies, and the replication scale.

Proposition for Conservation of Traditional Costumes - Mainly on the replication of Milchanggun's Jobok - (복식유물의 보존을 위한 제안 - 밀창군 조복의 복제를 중심으로 -)

  • Chae, Ok-Ja;Park, Chi-Sun;Park, Sung-Sil
    • 한국문화재보존과학회:학술대회논문집
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    • 2004.10a
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    • pp.75-80
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    • 2004
  • We proposed that the replicas be made as an alternative to achieve such reciprocal goals as the safe preservation of traditional costume relics and socio-educational realizations through exhibitions, etc., A replication was categorized for its purpose into a restoral replication a work based on the historical research of color and shapes as they were originally made and a current state replication . a production based on a minute record of the relics as they are excavated Then, we reported the reproduction process from the excavation to the exhibition on the excavated traditional costumes of Milchanggun's Jobok The purpose of a replication of relics is to record the relics experiencing the change resulted from the inevitable degeneration over time as organic cultural assets together with the substitution exhibition of relics and academic researches and so on. Accordingly, the above two methods are to be preceded by a deep and through research and study on the relics of replication. This study on the relics having an important cultural property value presents the preservation of tile cultural assets of traditional costume through the two replication processes and results and a flew pattern of exhibition.

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Design of UV-Molding Process to Maximize the Replication Properties in Microstructures (미세구조체의 전사 특성을 향상시키기 위한 UV 성형 공정의 설계)

  • Kim, Dong-Mook;Kim, Seok-Min;Sohn, So-Young;Kang, Shin-Ill
    • Transactions of the Korean Society of Mechanical Engineers A
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    • v.27 no.3
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    • pp.450-454
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    • 2003
  • It is important to control the processing conditions to maximize the replication quality of UV-molded microstructure. In the present study, the tip radius anil surface roughness of V-groove structure were measured to quantify the replication quality. UV-curing dose and the applied pressure were experimentally selected as the governing Processing conditions that affect the replication quality of the UV-molded part. Finally. an experimental optimization technique combining central composite design and desirability function approach was used to maximize the replication quality of UV-molded structure.

Optimization of Ultrasonic Imprinting Using the Response Surface Method (반응표면법을 이용한 초음파 임프린팅 공정의 최적화)

  • Jung, W.S.;Cho, Y.H.;Park, K.
    • Transactions of Materials Processing
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    • v.22 no.1
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    • pp.36-41
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    • 2013
  • The present study examines the micro-pattern replication on a plastic film using ultrasonic imprinting. Ultrasonic imprinting uses ultrasonic waves to generate repetitive microscale deformation in the polymer film. The resulting deformation heat on the surface of the film causes the surface region to soften sufficiently so that a replication of the micro-pattern can be obtained. To successfully replicate the micro-pattern on a large area of polymer film, a high replication ratio is needed as well as good uniformity over the entire region. In this study, a horn design is investigated by finite element analysis and is optimized through a response surface analysis. In the ultrasonic imprinting experiments, the response surface method was also used to determine the optimal processing conditions for better replication characteristics.

A New ColE1-like Plasmid Group Revealed by Comparative Analysis of the Replication Proficient Fragments of Vibrionaceae Plasmids

  • Pan, Li;Leung, P.C.;Gu, Ji-Dong
    • Journal of Microbiology and Biotechnology
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    • v.20 no.8
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    • pp.1163-1178
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    • 2010
  • Plasmids play important roles in horizontal gene transfer among Vibrionaceae, but surprisingly little is known about their replication and incompatibility systems. In this study, we successfully developed a bioinformatics-assisted strategy of experimental identification of seven Vibrio plasmid replicons. Comparative sequences analysis of the seven Vibrio plasmid replicons obtained in this study together with eight published Vibrionaceae plasmid sequences revealed replication-participating elements involved in the ColE1 mode of replication initiation and regulation. Like plasmid ColE1, these Vibrionaceae plasmids encode two RNA species (the primer RNA and the antisense RNA) for replication initiation and regulation, and as a result, the 15 Vibrionaceae plasmids were designated as ColE1-like Vibrionaceae (CLV) plasmids. Two subgroups were obtained for the 15 CLV plasmids, based on comparison of replicon organization and phylogenetic analysis of replication regions. Coexistence of CLV plasmids were demonstrated by direct sequencing analysis and Southern hybridization, strongly suggesting that the incompatibility of CLV plasmids is determined mainly by the RNA I species like the ColE1-like plasmids. Sequences resembling the conserved Xer recombination sites were also identified on the CLV plasmids, indicating that the CLV plasmids probably use the host site-specific recombination system for multimer resolution like that used by ColE1-like plasmids. All the results indicated that the 15 plasmids form a new ColE1-like group, providing a basis for the rapid characterization and classification of Vibrionaceae plasmids.

A study on the micro pattern replication properties of large area in injection molding (대면적 미세패턴 사출성형에서의 전사 특성 실험)

  • Kim, T.H.;Yoo, Y.E.;Je, T.J.;Kim, C.W.;Park, Y.W.;Choi, D.S.
    • Proceedings of the Korean Society for Technology of Plasticity Conference
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    • 2007.05a
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    • pp.205-208
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    • 2007
  • We injection molded a thin plate with micro prism patterns on its surface and investigated the fidelity of replication of the micro pattern depending on the process parameter such as mold temperature, injection rate or packing pressure. The size of the $90^{\circ}$ prism pattern is $50{\mu}m$ and the size of the plate is $400mm{\times}400mm$. The thickness is 1mm. The fidelity of the replication turned out quite different according to the process parameters and location of the patterns of the plate. We measured the cavity pressure and temperature in real-time during the molding to analyze the effect of the local melt pressure and temperature on the micro pattern replication.

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A study on the prizm pattern replication in injection molding (사출 도광판의 프리즘 패턴 전사성에 관한 실험적 연구)

  • Kim, Chang-Wan;Yoo, Yeong-Eun;Kim, Tae-Hoon;Je, Tae-Jin;Choi, Doo-Sun
    • Proceedings of the KSME Conference
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    • 2007.05a
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    • pp.1537-1541
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    • 2007
  • We injection molded a wedge type of plate with micro prizm patterns on its surface and investigated the fidelity of replication of the micro pattern depending on the process parameter such as mold temperature, melt temperature, injection rate or packing pressure. The size of the size of the $90^{\circ}$ prizm pattern is $50{\mu}m$ and the size of the plate is about 300㎜${\times}$200㎜. The thicknesses are 2.6㎜. and 0.7mm at each edge of the wedge type of plate. The fidelity of the replication turned out quite different according to the process parameters and location of the patterns on the plate. We measured the cavity pressure and temperature in real-time during the molding to analyze the effect of the local melt pressure and temperature on the micro pattern replication.

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