• Title/Summary/Keyword: Redundant structure

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Identification of Novel Cupredoxin Homologs Using Overlapped Conserved Residues Based Approach

  • Goyal, Amit;Madan, Bharat;Hwang, Kyu-Suk;Lee, Sun-Gu
    • Journal of Microbiology and Biotechnology
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    • v.25 no.1
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    • pp.127-136
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    • 2015
  • Cupredoxin-like proteins are mainly copper-binding proteins that conserve a typical rigid Greek-key arrangement consisting of an eight-stranded β-sandwich, even though they share as little as 10-15% sequence similarity. The electron transport function of the Cupredoxins is critical for respiration and photosynthesis, and the proteins have therapeutic potential. Despite their crucial biological functions, the identification of the distant Cupredoxin homologs has been a difficult task due to their low sequence identity. In this study, the overlapped conserved residue (OCR) fingerprint for the Cupredoxin superfamily, which consists of conserved residues in three aspects (i.e., the sequence, structure, and intramolecular interaction), was used to detect the novel Cupredoxin homologs in the NCBI non-redundant protein sequence database. The OCR fingerprint could identify 54 potential Cupredoxin sequences, which were validated by scanning them against the conserved Cupredoxin motif near the Cu-binding site. This study also attempted to model the 3D structures and to predict the functions of the identified potential Cupredoxins. This study suggests that the OCR-based approach can be used efficiently to detect novel homologous proteins with low sequence identity, such as Cupredoxins.

Segment-based Image Classification of Multisensor Images

  • Lee, Sang-Hoon
    • Korean Journal of Remote Sensing
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    • v.28 no.6
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    • pp.611-622
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    • 2012
  • This study proposed two multisensor fusion methods for segment-based image classification utilizing a region-growing segmentation. The proposed algorithms employ a Gaussian-PDF measure and an evidential measure respectively. In remote sensing application, segment-based approaches are used to extract more explicit information on spatial structure compared to pixel-based methods. Data from a single sensor may be insufficient to provide accurate description of a ground scene in image classification. Due to the redundant and complementary nature of multisensor data, a combination of information from multiple sensors can make reduce classification error rate. The Gaussian-PDF method defines a regional measure as the PDF average of pixels belonging to the region, and assigns a region into a class associated with the maximum of regional measure. The evidential fusion method uses two measures of plausibility and belief, which are derived from a mass function of the Beta distribution for the basic probability assignment of every hypothesis about region classes. The proposed methods were applied to the SPOT XS and ENVISAT data, which were acquired over Iksan area of of Korean peninsula. The experiment results showed that the segment-based method of evidential measure is greatly effective on improving the classification via multisensor fusion.

Status Analysis for the Confinement Monitoring Technology of PWR Spent Nuclear Fuel Dry Storage System (경수로 사용후핵연료 건식저장시스템의 격납감시 기술현황 분석)

  • Baeg, Chang-Yeal;Cho, Chun-Hyung
    • Journal of Nuclear Fuel Cycle and Waste Technology(JNFCWT)
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    • v.14 no.1
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    • pp.35-44
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    • 2016
  • Leading national R&D project to design a PWR spent nuclear fuel interim dry storage system that has been under development since mid-2009, which consists of a dual purpose metal cask and concrete storage cask. To ensure the safe operation of dry storage systems in foreign countries, major confinement monitoring techniques currently consist of pressure and temperature measurement. In the case of a dual purpose metal cask, a pressure sensor is installed in the interspace of bolted double lid(primary and secondary lid) in order to measure pressure. A concrete storage cask is a canister based system made of double/redundant welded lid to ensure confinement integrity. For this reason, confinement monitoring method is real time temperature measurement by thermocouple placed in the air flow(air intake and exit) of the concrete structure(over pack and module). The use of various monitoring technologies and operating experiences for the interim dry storage system over the last decades in foreign countries were analyzed. On the basis of the analysis above, development of the confinement monitoring technology that can be used optimally in our system will be available in the near future.

An Efficient Algorithm for Dynamic Shortest Path Tree Update in Network Routing

  • Xiao, Bin;Cao, Jiannong;Shao, Zili;Sha, Edwin H.M.
    • Journal of Communications and Networks
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    • v.9 no.4
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    • pp.499-510
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    • 2007
  • Shortest path tree(SPT) construction is essential in high performance routing in an interior network using link state protocols. When some links have new state values, SPTs may be rebuilt, but the total rebuilding of the SPT in a static way for a large computer network is not only computationally expensive, unnecessary modifications can cause routing table instability. This paper presents a new update algorithm, dynamic shortest path tree(DSPT) that is computationally economical and that maintains the unmodified nodes mostly from an old SPT to a new SPT. The proposed algorithm reduces redundancy using a dynamic update approach where an edge becomes the significant edge when it is extracted from a built edge list Q. The average number of significant edges are identified through probability analysis based on an arbitrary tree structure. An update derived from significant edges is more efficient because the DSPT algorithm neglect most other redundant edges that do not participate in the construction of a new SPT. Our complexity analysis and experimental results show that DSPT is faster than other known methods. It can also be extended to solve the SPT updating problem in a graph with negative weight edges.

3D Model Compression For Collaborative Design

  • Liu, Jun;Wang, Qifu;Huang, Zhengdong;Chen, Liping;Liu, Yunhua
    • International Journal of CAD/CAM
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    • v.7 no.1
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    • pp.1-10
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    • 2007
  • The compression of CAD models is a key technology for realizing Internet-based collaborative product development because big model sizes often prohibit us to achieve a rapid product information transmission. Although there exist some algorithms for compressing discrete CAD models, original precise CAD models are focused on in this paper. Here, the characteristics of hierarchical structures in CAD models and the distribution of their redundant data are exploited for developing a novel data encoding method. In the method, different encoding rules are applied to different types of data. Geometric data is a major concern for reducing model sizes. For geometric data, the control points of B-spline curves and surfaces are compressed with the second-order predictions in a local coordinate system. Based on analysis to the distortion induced by quantization, an efficient method for computation of the distortion is provided. The results indicate that the data size of CAD models can be decreased efficiently after compressed with the proposed method.

An Efficient Algorithm for Mining Ranged Association Rules (영역 연관규칙 탐사를 위한 효율적 알고리즘)

  • 조일래
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.1 no.2
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    • pp.169-181
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    • 1997
  • Some association rules can have very high confidence in a sub-interval or a subrange of the domain, though not quite high confidence in the whole domain. In this paper, we define a ranged association rule, an association with high confidence worthy of special attention in a sub-domain, and further propose an efficient algorithm which finds out ranged association rules. The proposed algorithm is data-driven method in a sense that hypothetical subranges are built based on data distribution itself. In addition, to avoid redundant database scanning, we devise an effective in-memory data structure, that is collected through single database scanning. The simulation shows that the suggested algorithm has reliable performance at the acceptable time cost in actual application areas.

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Fault-tree Analysis Modeling for Bus Structure of High Reliable Redundant Controller (고신뢰성 다중화 제어기기의 버스구조에 대한 결함수목분석(Fault-tree Analysis) 모델링)

  • Noh, Jinpyo;Kim, Joonkyo;Son, Kwang-Seop;Kim, Dong-Hoon;Park, Jaehyun
    • Proceedings of the Korea Information Processing Society Conference
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    • 2012.11a
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    • pp.87-90
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    • 2012
  • 원자력발전소에 사용되는 모든 시스템은 IEEE에서 최고 수준의 안전도인 CLASS 1E로 분류된다. 그중에서 안전계통은 원자력발전소 안전에 관련한 모든 분야를 관리하는 계통이다. 산업이 발전함에 따라 안전계통 또한 그 규모와 복잡성이 높아지고 있고, 이에 적용되는 요구사항 또한 엄격해지고 있다. 따라서 발전소에 적용되는 안전 동작에 대한 기준을 결정하기 위해서 철저한 오류 예측분석이 수행 되어야 한다. 그 중에서도 NUREG-0492로 규정되어 있는 결함수목분석(Fault Tree Analysis)은 연역적 오류 예측 분석방법으로 원자력 발전소, 우주 산업 등에 관련된 분야는 본 방법을 통하여 오류 예측 분석이 이루어 져야한다. 본 논문에서 원전안전계통을 관리하는 구현 모델인 원전안전등급제어기기(Safety Programmable Logic Controller)에 대하여 결함수목분석을 통한 오류 예측 분석을 하였다. 또한, 위의 구조에 대하여 MSC(Message Sequence Chart)를 통한 모델링을 수행하여, 결함수목분석을 적용하는 과정에서 신뢰도 향상을 더하였다.

INTEGRATION MODEL OF COST AND SCHEDULE IN STEEL BOX GIRDER BRIDGE PRODUCTION PROCESS

  • Seok Kim;Kyoungmin Kim;Seung-Ho Ha ;Kyong Ju Kim
    • International conference on construction engineering and project management
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    • 2005.10a
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    • pp.1262-1267
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    • 2005
  • It is still difficult to share and utilize the information generated at each phase of a steel box girder production process due to the spatial gap and different level of management information. The physical distance results in the inefficiency of the information transmission, the accidental omission and typos of the relative information, and so on. Various levels of management information make it difficult to embody a new management system. Eventually, these factors incur the loss of cost and schedule and interrupt development of a new management system. This paper analyzes a current process and presents graphical process flow by using IDEF0. Based this analysis, the research for new production process and work breakdown structure (WBS) is conducted. At the end of this paper, the conceptual design of this system is suggested. Through new management system, it is expected that the model proposed in this study will improve the management process in the steel box production, and the improved process will reduce the redundant cost and schedule information, transmission and deposit generated by manual paper.

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Aircraft Digital Fly-By-Wire System Technology Development Trend (항공기 디지털 전자식 비행제어 시스템 기술 개발 동향)

  • Seong-Byeong Chae
    • The Journal of the Korea institute of electronic communication sciences
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    • v.18 no.3
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    • pp.509-520
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    • 2023
  • In this paper, the structure and the characteristics of the Fly-By-Wire system applied to the civil aircraft was described. The development trend of the redundant method of the flight control system, data communication system, control surface actuation system and the control laws implemented by the Fly-By-Wire system of the civil aircraft are discussed. The Fly-By-Wire system was first applied to the fighter and its inherent advantages lead to the advent of the Fly-By-Wire civil aircraft. Recently even the small jet aircraft shows the trend of adopting the Fly-By-Wire system. In the future, most of the aircraft are expected to be the Fly-By-Wire type.

Data Aggregation and Transmission Mechanism for Energy Adaptive Node in Wireless Sensor Networks (무선 센서네트워크 환경에서 에너지를 고려한 노드 적응적 데이터 병합 및 전달 기법)

  • Cho, Young-Bok;You, Mi-Kyung;Lee, Sang-Ho
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.36 no.11A
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    • pp.903-911
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    • 2011
  • In this paper we proposed an energy adaptive data aggregation and transmission mechanism to solve the problem of energy limitation in wireless sensor networks (WSNs). Hierarchical structure methods are wildly used in WSNs to improve the energy efficiency. LEACH and TEEN protocols are the typical techniques. In these methods, all nodes, including nodes who have sensed data to transmit and nodes who haven't, are set frame timeslots in every round. MNs (member nodes) without sensed data keep active all the time, too. These strategies caused energy waste. Furthermore, if data collection in MNs is same to the previous transmission, it increases energy consumption. Most hierarchical structure protocols are developed based on LEACH. To solve the above problems, this paper proposed a method in which only MNs with sensed data can obtain allocated frame to transmit data. Moreover, if the MNs have same sensed data with previous, MNs turn to sleep mode. By this way redundant data transmission is avoided and aggregation in CH is lightened, too.