• 제목/요약/키워드: Rank-additive

검색결과 44건 처리시간 0.025초

다변량 모체효과 모형을 이용한 돼지 경제형질의 분산성분 추정 (Estimation of Variance Component on Swine Economic Traits using Multivariate Maternal Animal Model)

  • 박종원;김병우;김시동;장현기;전진태;공일근;이정규
    • 농업생명과학연구
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    • 제44권2호
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    • pp.29-38
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    • 2010
  • 본 연구에서는 2000년부터 2008년 사이에 출생한 Duroc종, Landrace종 및 Yorkshire종 종돈의 총 31,455두의 농장검정 자료를 이용하여 다형질 동물 모형과 다변량 모체효과 모형에 의한 돼지 경제형질의 유전적 분산성분을 추정하였다. 품종별 조사된 각 형질에 있어서 다변량 모체효과 모형을 이용하여 추정된 상가적 효과에 의한 유전력이 모체효과에 의한 유전력보다 모두 높게 나타났으며, 다형질 동물 모형에서 상가적 효과만 고려했을 때의 유전력이 다변량 모체효과 모형에서 추정된 상가적 효과의 의한 유전력보다 대부분 높게 추정되었다. 다변량 모체효과 모형을 이용하여 추정된 모체효과에 의한 육종가와 표현형가와의 상관관계에 있어서 대부분 낮은 정(+)의 상관이거나 강한 부(-)의 상관관계를 보여 품종별 각 형질에 있어서 모체효과를 적절히 고려하여 육종가와 표현형의 상관관계를 높인다면 보다 나은 개량을 도모 할 수 있을 것으로 사료된다.

Random Regression Models Are Suitable to Substitute the Traditional 305-Day Lactation Model in Genetic Evaluations of Holstein Cattle in Brazil

  • Padilha, Alessandro Haiduck;Cobuci, Jaime Araujo;Costa, Claudio Napolis;Neto, Jose Braccini
    • Asian-Australasian Journal of Animal Sciences
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    • 제29권6호
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    • pp.759-767
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    • 2016
  • The aim of this study was to compare two random regression models (RRM) fitted by fourth ($RRM_4$) and fifth-order Legendre polynomials ($RRM_5$) with a lactation model (LM) for evaluating Holstein cattle in Brazil. Two datasets with the same animals were prepared for this study. To apply test-day RRM and LMs, 262,426 test day records and 30,228 lactation records covering 305 days were prepared, respectively. The lowest values of Akaike's information criterion, Bayesian information criterion, and estimates of the maximum of the likelihood function (-2LogL) were for $RRM_4$. Heritability for 305-day milk yield (305MY) was 0.23 ($RRM_4$), 0.24 ($RRM_5$), and 0.21 (LM). Heritability, additive genetic and permanent environmental variances of test days on days in milk was from 0.16 to 0.27, from 3.76 to 6.88 and from 11.12 to 20.21, respectively. Additive genetic correlations between test days ranged from 0.20 to 0.99. Permanent environmental correlations between test days were between 0.07 and 0.99. Standard deviations of average estimated breeding values (EBVs) for 305MY from $RRM_4$ and $RRM_5$ were from 11% to 30% higher for bulls and around 28% higher for cows than that in LM. Rank correlations between RRM EBVs and LM EBVs were between 0.86 to 0.96 for bulls and 0.80 to 0.87 for cows. Average percentage of gain in reliability of EBVs for 305-day yield increased from 4% to 17% for bulls and from 23% to 24% for cows when reliability of EBVs from RRM models was compared to those from LM model. Random regression model fitted by fourth order Legendre polynomials is recommended for genetic evaluations of Brazilian Holstein cattle because of the higher reliability in the estimation of breeding values.

첨가제를 이용한 보일러 열교환기의 고온부식 방지기술 현황 (A Technical Review on the Protective Measures of High Temperature Corrosion of Boiler Heat Exchangers with Additives)

  • 김범종;류창국;이은도;김영두;이정우;송재헌
    • 청정기술
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    • 제23권3호
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    • pp.223-236
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    • 2017
  • 기후변화 대응을 위한 청정 화력발전 기술의 일환으로 폐기물과 바이오매스를 중심으로 한 신재생연료의 이용이 크게 증가함에 따라 특히 고온 고압 스팀 생산이 필요한 발전용 보일러 열교환기의 고온부식(High temperature corrosion) 문제가 심각한 현안으로 대두되고 있다. 이러한 문제점은 저급연료에 포함된 염화알칼리 성분이 보일러 내 열교환기 중 표면온도가 가장 높은 과열기(Superheater) 또는 재열기(Reheater)에 점착된 후 염소에 의해 부식이 가속화되어 일어난다. 이를 해결하기 위해 설계 변경, 재료 개선, 연료 전처리 등의 고온부식 회피 방법과 함께 첨가제를 이용한 고온부식 방지 기술이 활용되고 있다. 본 연구에서는 보일러에서 고온부식 방지를 위한 다양한 접근 중 특히 첨가제를 이용한 연구개발 현황을 소개한다.

Selecting Protected Area Using Species Richness

  • Kwon, Hyuksoo;Kim, Jiyoen;Seo, Changwan
    • 한국환경생태학회지
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    • 제29권1호
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    • pp.14-20
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    • 2015
  • We created species richness maps of mammals, birds and plants using "Nnational Ecosystem Survey" data and identified correlations between species richness maps of each taxa. We examine the distribution of species richness of each taxa and calculated conservation priority rank through plotting species-area curves using an additive benefit function in Zonation. The conclusions of this study are as follows. First, plant showed high species richness in Gangwon province and Baekdudaegan, and mammals showed high species richness at eastern slope of Baekdudaegan in Gangwon province unusually and the species richness of mammals distributed equally except Gyeonggi and Chungnam province. However, birds showed high species richness in the west costal because the area is the major route of winter migratory birds. Second, correlation of each taxa's distribution is not significant. Correlation between mammals and birds is positive but correlations between birds and others are negative. Because mammals inhabit in forest but birds mostly live in coastal wetlands and rivers. Therefore, bird's habitats are not shared with other habitats. Third, the probability of mammals occurrence is very low under 25% in species-area curve, others increase proportionally to area. Birds increase dramatically richness at 10% because bird's habitat is concentrated in coastal wetlands and rivers. Plants increased gently species richness due to large forest in Gangwon province. We can calculate the predicted number of species in curves and plan various conservation strategies using the marginal number of species. Finally, high priority ranks for conservation distributed mainly in Gangwon province and Baekdudaegan. When we compared with priority map and terrestrial national parks, the parks were evaluated as high priority ranks. However, the rank of parks away from Baekdudaegan was low. This study has the meaning of selecting conservation priority area using National Ecosystem Survey. In spite of the omission of survey data in national parks and Baekdudaegan, the results were good. Therefore, the priority rank method using species distribution models is useful to selecting protected areas and improving conservation plans. However, it is needed to select protected areas considering various evaluation factors, such as rarity, connectivity, representativeness, focal species and so on because there is a limit to select protected area only using species richness.

Genetic correlations between first parity and accumulated second to last parity reproduction traits as selection aids to improve sow lifetime productivity

  • Noppibool, Udomsak;Elzo, Mauricio A.;Koonawootrittriron, Skorn;Suwanasopee, Thanathip
    • Asian-Australasian Journal of Animal Sciences
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    • 제30권3호
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    • pp.320-327
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    • 2017
  • Objective: The objective of this research was to estimate genetic correlations between number of piglets born alive in the first parity (NBA1), litter birth weight in the first parity (LTBW1), number of piglets weaned in the first parity (NPW1), litter weaning weight in the first parity (LTWW1), number of piglets born alive from second to last parity (NBA2+), litter birth weight from second to last parity (LTBW2+), number of piglets weaned from second to last parity (NPW2+) and litter weaning weight from second to last parity (LTWW2+), and to identify the percentages of animals (the top 10%, 25%, and 50%) for first parity and sums of second and later parity traits. Methods: The 9,830 records consisted of 2,124 Landrace (L), 724 Yorkshire (Y), 2,650 LY, and 4,332 YL that had their first farrowing between July 1989 and December 2013. The 8-trait animal model included the fixed effects of first farrowing year-season, additive genetic group, heterosis of the sow and the litter, age at first farrowing, and days to weaning (NPW1, LTWW1, NPW2+, and LTWW2+). Random effects were animal and residual. Results: Heritability estimates ranged from $0.08{\pm}0.02$ (NBA1 and NPW1) to $0.29{\pm}0.02$ (NPW2+). Genetic correlations between reproduction traits in the first parity and from second to last parity ranged from $0.17{\pm}0.08$ (LTBW1 and LTBW2+) to $0.67{\pm}0.06$ (LTWW1 and LTWW2+). Phenotypic correlations between reproduction traits in the first parity and from second to last parity were close to zero. Rank correlations between LTWW1 and LTWW2+ estimated breeding value tended to be higher than for other pairs of traits across all replacement percentages. Conclusion: These rank correlations indicated that selecting boars and sows using genetic predictions for first parity reproduction traits would help improve reproduction traits in the second and later parities as well as lifetime productivity in this swine population.

국내항만투자의 방사.비방사적 효율성 측정을 위한 모형개발 및 실증적 적용에 관한 연구 (A Study on the Model Development and Empirical Application for Measuring the Radial and Non-radial Efficiencies of Investment in Domestic Seaports)

  • 박노경
    • 한국항만경제학회지
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    • 제27권1호
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    • pp.185-212
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    • 2011
  • 본 논문에서는 국내항만투자의 효율성을 정확하게 측정하기 위해서 기존의 방사모형과 새롭게 개발된 비방사적인 방법(패널 가법모형, 패널 RAM모형, 패널 SBM 모형)으로, 2001 년부터 2007년까지 국내 20개 항만의 4개의 산출물(항만서비스만족도, 선박입출항척수, 항만재정수입, 컨테이너화물처리량)과 1개의 투입물(항만투자금액)을 이용하여 국내항만들의 효율성을 측정하고 그 결과를 비교분석하였다. 실증분석의 주요한 결과는 다음과 같다. 첫째, 효율성 수치의 순위에 의한 스피어만의 서열상관관계계수의 결과는 (1) 방사모형과 패널가 법모형의 효율성 수치에 의한 서열상관이 약 76%수준 일치 (2) 효율성 수치에 의한 서열상관관계는 약71.6%수준에서 일치하였다. 둘째, 방사-비방사모형의 효율성수치들은 (1) 방사모형과 패널SBM모형(비교적 유사) (2) 패널RAM모형의 효율성 수치가 더 높았음, (3) 패널SBM모형과는 효율성 수치가 매우 유사 하였음. 셋째, 방사모형과 비방사모형의 투입 및 산출물 슬랙의 크기를 비교해 보면 방사모형의 슬랙이 더 적었다. 넷째, 가법모형을 제외한 나머지 모형들에 대한 측정결과를 보면, (1) 효율성수치나 효율적인 항만숫자 측면에서 보면 패널RAM모형, 패널SBM모형, 방사모형의 순서였다. (2) 최저효율성 수치를 비교해 본 결과도 첫 번째와 동일한 순서를 나타내었다. 본 연구의 정책적인 함의는 다음과 같다. 첫째, 국내항만들은 방사 비방사모형을 이용하여 해당항만의 효율성을 더욱 엄격하게 평가하여 그에 따른 항만경영전략을 도입하여야만 한다. 둘째, 국내항만들은 방사 비방사모형에서 제시할 수 있는 투입 및 산출요소의 슬랙의 크기를 파악하고, 해당항만에 적합한 슬랙을 제거시키는 항만경영전략을 도입하여야만 한다. 셋째, 본 논문에서 제시했던 비방사모형 중에서 해당항만에 적합한 측정방법을 선택하여 해당항만경영에 도입하는 방법을 도입해야만 한다. 본 논문의 한계점은 국내에서는 비방사적인 측정방법에 대한 연구가 극히 부진하여 방사적인 방법과 비방사적인 방법과의 모형별로 심도있는 분석이 시도되지 못했다고 하는 점이다. 이 부분에 대한 연구는 차후에 진행하고자 한다.

Variance components estimation for farrowing traits of three purebred pigs in Korea

  • Lopez, Bryan Irvine;Kim, Tae Hun;Makumbe, Milton Tinashe;Song, Chol Won;Seo, Kang Seok
    • Asian-Australasian Journal of Animal Sciences
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    • 제30권9호
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    • pp.1239-1244
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    • 2017
  • Objective: This study was conducted to estimate breed-specific variance components for total number born (TNB), number born alive (NBA) and mortality rate from birth through weaning including stillbirths (MORT) of three main swine breeds in Korea. In addition, the importance of including maternal genetic and service sire effects in estimation models was evaluated. Methods: Records of farrowing traits from 6,412 Duroc, 18,020 Landrace, and 54,254 Yorkshire sows collected from January 2001 to September 2016 from different farms in Korea were used in the analysis. Animal models and the restricted maximum likelihood method were used to estimate variances in animal genetic, permanent environmental, maternal genetic, service sire and residuals. Results: The heritability estimates ranged from 0.072 to 0.102, 0.090 to 0.099, and 0.109 to 0.121 for TNB; 0.087 to 0.110, 0.088 to 0.100, and 0.099 to 0.107 for NBA; and 0.027 to 0.031, 0.050 to 0.053, and 0.073 to 0.081 for MORT in the Duroc, Landrace and Yorkshire breeds, respectively. The proportion of the total variation due to permanent environmental effects, maternal genetic effects, and service sire effects ranged from 0.042 to 0.088, 0.001 to 0.031, and 0.001 to 0.021, respectively. Spearman rank correlations among models ranged from 0.98 to 0.99, demonstrating that the maternal genetic and service sire effects have small effects on the precision of the breeding value. Conclusion: Models that include additive genetic and permanent environmental effects are suitable for farrowing traits in Duroc, Landrace, and Yorkshire populations in Korea. This breed-specific variance components estimates for litter traits can be utilized for pig improvement programs in Korea.

Anti-proliferative Effect of Tetra-arsenic Oxide (TetraAs®) in Human Gastric Cancer Cells in Vitro

  • Chung, Won-Heui;Koo, Hye-Jin;Kuh, Hyo-Jeong
    • Journal of Pharmaceutical Investigation
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    • 제37권5호
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    • pp.305-309
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    • 2007
  • Arsenic compounds have been used to treat various diseases including cancer in oriental medicine. Arsenic trioxide ($As_2O_3,\;Trisenox^{(R)}$) has been used for the treatment of leukemia and its anti-solid tumor activity has also been reported recently. Tetra-arsenic oxide ($As_4O_6,\;TetraAs^{(R)}$) is a newly developed arsenic compound which has shown an anticancer activity in some human cancer cell lines. The purpose of this study was to evaluate the anti-gastric cancer potential of TetraAs and to search for an agent with synergistic interaction with TetraAs against human gastric cancers. We analysed anti-proliferative effect of TetraAs when given alone and in combination with other chemotherapeutic agents such as 5-FU, paclitaxel, and cisplatin in SNU-216, a human gastric cancer cell line. The $IC_{50}$ of these 4 anti-cancer drugs ranged from 5.8 nM to $7.5\;{\mu}M$ with a potency rank of order paclitaxel>TetraAs>cisplatin>5-FU. TetraAs showed 10-fold greater potency than 5-FU and cisplatin at the same effect level of $IC_{50}$. TetraAs+5-FU and TetraAs+paclitaxel showed synergistic and additive interaction, respectively. On the other hand, TetraAs with cisplatin group appeared to be strongly antagonistic. Apoptotic population was measured and compared between single and combination treatment. The apoptotic cells for the combination of TetraAs+5-FU showed significant increase compared to single TetraAs treatment. On the contrary, TetraAs+cisplatin showed less apoptotic cells compared to TetraAs or cisplatin alone treatment. Overall, our results indicate that TetraAs can be effectively combined with 5-FU or paclitaxel, but not with cisplatin for synergistic anti-cancer effect, which warrants further evaluation using in vivo models.

개선된 화학물질 우선순위 선정 기법(CRS-Korea II)과 그 활용을 통한 지역별 유독물 우선순위의 도출 (Development of CRS-Korea II and its Application to Setting the Priority of Toxic Chemicals for Local Provinces)

  • 최승필;박화성;이동수;신용승;김예신;신동천
    • Environmental Analysis Health and Toxicology
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    • 제20권4호통권51호
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    • pp.311-325
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    • 2005
  • A chemical ranking and scoring system, CRS - Korea, has recently been developed and proposed to use to prioritize on a screening level the toxic chemicals for monitoring and risk assessment. As CRS-Korea requires rigorous assessments prior to its wide application, an assessment was conducted in this study by examining the contribution of individual parameter score to the final chemical score or ranking. The sensitivity of the system to the default values for various parameters of missing data was also tested. The chemical ranking/score was round to depend primarily on the score of a single parameter, i. e., the chemical release, while toxicity scores show little correlation with the priority Further analysis indicated that the dominating effect of the chemical release results from i) its multiplicative relationship with the other two exposure parameters (biodegradation and persistent) and ii) the fact that a maximum score of 10 was assigned to the chemical release parameter while 5 was assigned for all others. AE the fraction of the data that are missing exceeded $70\%$ for various toxicity parameters at compared to less than $10\%$ for exposure parameters, the sensitivity of the ranking to the default value was not significant (rank correlation coefficient = 0.98) for toxicity parameters. Bated on this assessment, an improved CRS system (CRS - Korea II) was proposed in which the impact of the chemical release was properly adjusted by changing the multiplicative relationship to additive one and the maximum score to 5. Chemical priority was derived for each of 16 provinces by using CRS-Korea II. The chemical priority was found to significantly vary among the provinces. It was concluded that not only the national chemical priority but the local chemical priority should be taken into account in setting the nationwide chemical monitoring and risk assessment strategy.

Variance Components and Genetic Parameters for Milk Production and Lactation Pattern in an Ethiopian Multibreed Dairy Cattle Population

  • Gebreyohannes, Gebregziabher;Koonawootrittriron, Skorn;Elzo, Mauricio A.;Suwanasopee, Thanathip
    • Asian-Australasian Journal of Animal Sciences
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    • 제26권9호
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    • pp.1237-1246
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    • 2013
  • The objective of this study was to estimate variance components and genetic parameters for lactation milk yield (LY), lactation length (LL), average milk yield per day (YD), initial milk yield (IY), peak milk yield (PY), days to peak (DP) and parameters (ln(a) and c) of the modified incomplete gamma function (MIG) in an Ethiopian multibreed dairy cattle population. The dataset was composed of 5,507 lactation records collected from 1,639 cows in three locations (Bako, Debre Zeit and Holetta) in Ethiopia from 1977 to 2010. Parameters for MIG were obtained from regression analysis of monthly test-day milk data on days in milk. The cows were purebred (Bos indicus) Boran (B) and Horro (H) and their crosses with different fractions of Friesian (F), Jersey (J) and Simmental (S). There were 23 breed groups (B, H, and their crossbreds with F, J, and S) in the population. Fixed and mixed models were used to analyse the data. The fixed model considered herd-year-season, parity and breed group as fixed effects, and residual as random. The single and two-traits mixed animal repeatability models, considered the fixed effects of herd-year-season and parity subclasses, breed as a function of cow H, F, J, and S breed fractions and general heterosis as a function of heterozygosity, and the random additive animal, permanent environment, and residual effects. For the analysis of LY, LL was added as a fixed covariate to all models. Variance components and genetic parameters were estimated using average information restricted maximum likelihood procedures. The results indicated that all traits were affected (p<0.001) by the considered fixed effects. High grade $B{\times}F$ cows (3/16B 13/16F) had the highest least squares means (LSM) for LY ($2,490{\pm}178.9kg$), IY ($10.5{\pm}0.8kg$), PY ($12.7{\pm}0.9kg$), YD ($7.6{\pm}0.55kg$) and LL ($361.4{\pm}31.2d$), while B cows had the lowest LSM values for these traits. The LSM of LY, IY, YD, and PY tended to increase from the first to the fifth parity. Single-trait analyses yielded low heritability ($0.03{\pm}0.03$ and $0.08{\pm}0.02$) and repeatability ($0.14{\pm}0.01$ to $0.24{\pm}0.02$) estimates for LL, DP and parameter c. Medium heritability ($0.21{\pm}0.03$ to $0.33{\pm}0.04$) and repeatability ($0.27{\pm}0.02$ to $0.53{\pm}0.01$) estimates were obtained for LY, IY, PY, YD and ln(a). Genetic correlations between LY, IY, PY, YD, ln(a), and LL ranged from 0.59 to 0.99. Spearman's rank correlations between sire estimated breeding values for LY, LL, IY, PY, YD, ln(a) and c were positive (0.67 to 0.99, p<0.001). These results suggested that selection for IY, PY, YD, or LY would genetically improve lactation milk yield in this Ethiopian dairy cattle population.