• Journal of Microbiology and Biotechnology
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• v.26 no.12
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• pp.2206-2213
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• 2016

Recently, several studies have revealed that commercial microbial identification systems do not accurately identify the uncommon causative species of candidiasis, including Candida famata, Meyerozyma guilliermondii, and C. auris. We investigated the accuracy of species-level identification in a collection of clinical isolates previously identified as C. famata (N = 38), C. lusitaniae (N = 1 2), and M. guilliermondii (N = 5) by the Vitek 2 system. All 55 isolates were re-analyzed by the Phoenix system (Becton Dickinson Diagnostics), two matrix-assisted laser desorption ionization-time of flight mass spectrometry analyzers (a Vitek MS and a Bruker Biotyper), and by sequencing of internal transcribed spacer (ITS) regions or 26S rRNA gene D1/D2 domains. Among 38 isolates previously identified as C. famata by the Vitek 2 system, the majority (27/38 isolates, 71.1%) were identified as C. tropicalis (20 isolates) or C. albicans (7 isolates) by ITS sequencing, and none was identified as C. famata. Among 20 isolates that were identified as C. tropicalis, 17 (85%) were isolated from urine. The two isolates that were identified as C. auris by ITS sequencing originated from ear discharge. The Phoenix system did not accurately identify C. lusitaniae, C. krusei, or C. auris. The correct identification rate for 55 isolates was 92.7% (51/55 isolates) for the Vitek MS and 94.6% (52/55 isolates) for the Bruker Biotyper, as compared with results from ITS sequencing. These results suggest that C. famata is very rare in Korea, and that the possibility of misidentification should be noted when an uncommon Candida species is identified.

• Journal of Environmental Impact Assessment
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• v.22 no.5
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• pp.409-426
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• 2013

The purpose of this study is to present the raw data for management and conservation of tidal flat by objective surveying and analysing the halophytes and vegetation distributed in Seocheon tidal flat wetland conservation area, Korea. The results are as follows. The numbers of halophytes in this site were summarized as 27 taxa including 13 families, 21 genera, 26 species and 1 variety. In the results of ecologically important species, rare plant was 1 taxa, 10 taxa of the specific plants by floristic region, 1 taxa of naturalized plant and 1 taxa of the plant with approval for delivering oversea. The life form spectrum consisted of therophytes(44.4%), hemicryptophytes(25.9%), geophytes(14.8%), nanophanerophytes(7.5%), chamaephytes and hydatophytes(each 3.7%). The types of vegetation of Seocheon tidal flat wetland conservation area were classified with 17 communities including Vitex rotundifolia community, Suaeda maritima community, Calystegia soldanella community and so forth. In the halophytes composition, section C and E-1 had the largest character species and companion species. In the results of vegetation amount, section C, D, E-1 and E-2 were the highest score, on the other hand, section A and B were the lowest. The final rating was calculated by adding up values of two factors, and section C and E-1 had the highest rating of II. In future, we will survey the whole flora in Seocheon tidal flat, we will offer the help to establishing the conservation plan of coastal plant ecosystem in West Sea.

• Korean Journal of Agricultural and Forest Meteorology
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• v.6 no.1
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• pp.1-10
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• 2004

The climate of Minamiakikawa forest in Japan is similar to that of Mt. Jiri in South Korea. There is a large development plan for Minamiakikawa forest, and a change in the species composition is expected. This study was initiated to compare forest transition caused by artificial perturbations in Korea and Japan. Long-term field observations on species composition are reported. We found 98 families, 231 genera, 315 species, 29 varieties, and 8 races, making a total of 352 classification groups of higher plants in the Minamiakikawa forest area. Among them, 11 families, 12 species and 2 varieties are rare or endangered. The study area is dominated by Cryptomerica japonica and Chamaecyparis obtusa. The time and restoration effects on secondary and latent forestation consider the development of the Quercus mongolica community, the Quercus serrata community, and deciduous-broadleaved tree ascension. This indicates that the forest has been restored to Abies firma, Pinus densiflora or Cryptomeria japonica and Fagus japonica, which is considered latent natural forestation of the area in a natural transfer.

• Korean Journal of Plant Taxonomy
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• v.36 no.2
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• pp.109-127
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• 2006

A taxonomic study of Habenaria in Korea was carried out based on the extensive examinations of floral morphologies and distribution. As the results, we classified the genus in Korea into the following 5 species; H. linearifolia Maxim., H. cruciformis Ohwi, H. radiata Splengl., H. chejuensis Y.N. Lee & K.S. Lee and H. flagellifera Makino. H. cruciformis is recognized as a distinct species distinguished from H. linearifolia, H. sagittifera Rchb. f. and H. schindleri Schltr., and we clarified its morphological differences from the species. H. linearifolia f. integrilova Ohwi which has been seperated by shape of lateral lobe of lip was merged into f. linearifolia oin this study. Furthermore we investigated the distribution of Habenaria in Korea based on the herbarium specimens and field surveys. The result shows that H. radiata is rare in the middle part of the Korean Peninsula and H. chejuensis and H. flagellifera are restricted in Jeju Island, so the conservation on the habitats of these species is required.

• Korean Journal of Environment and Ecology
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• v.23 no.5
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• pp.392-410
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• 2009

The vascular plants recorded from the 11 sites of coastal sand dune in North Gyeongsang Province are as follows: 204 taxa, 2 hybrids, 1 form, 22 varieties, 1 subspecies, 178 species, 132 genera, 43 families. These areas also present rare plant (Glehnia littoralis); 20 taxa, 20 species, 20 genera, and 15 families of floristics special plants; 46 taxa, 2 variety, 44 species, 30 genera, and 12 families of naturalized plants. The ratio of urbanization and naturalized index is 16.14% and 22.55% respectively. Life form spectrum is Th-$R_5-D_4$-e type. The number of species recorded from the coastal sand dune in Hujeong area turned out to be the highest (44.6%), and the coastal sand dune in Heseo area showed the highest naturalized index (31.58%).

• Journal of the Korean earth science society
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• v.37 no.6
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• pp.325-331
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• 2016

Three diatom assemblage zones were erected from HMB-103 core sediment of the Heuksan Mud Belt. The paleoenvironmental changes were reconstructed basing on diatom analyses using indicator species, cold and warm water species, and salinity. Seventy-six species belonging to 41 genera were identified in the core sediments. The number of diatom valves per gram of dry sediment ranged from 0.1 to $15.4{\times}10^4g^{-1}$. As a result, diatom assemblage I in about 45,000 yr B.P showed a high abundance in cold species indicating a major influence by the Korea Coastal Current. Diatom assemblage II from 14,000 to 11,646 yr B.P is characterized by rare abundance and indicative of the cold periods at Younger Dryas with the lower sea-level. However, diatom assemblage III from 11,646 yr B.P to Holocene was more affected by the Yellow Sea Warm Current while the progressive sea level rise.

• Korean Journal of Environment and Ecology
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• v.23 no.4
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• pp.326-332
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• 2009

A faunistic study on the terrestrial insects of Unmunsan(located in the boundary between Unmun-myeon Chongdo-gun Gyoungbuk and Sannae-myeon Milyang-si Gyoungnam, Korea) was carried out during November, 2007 to October, 2008. It was found that terrestrial insects distributed in nature sabbatical area of Unmunsan, were composed of 14 orders, 151 families, 610 genera, 756 species. In this study, it shows the dominances of taxa from site U1 to U4, in order of the following: Lepidoptera, Coleoptera and Hymenoptera. Lepidoptera with 252 species and 33.3% show the highest dominance and Coleoptera follows the former with 182 species and 24.1% in dominance. The rare Luciola lateralis Motschulsky and Spindasis takanonis (Matsumura) which is designated as the endangered species level II by the Ministry of Environment inhabit in Unmunsan.

• Journal of Plant Biotechnology
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• v.37 no.4
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• pp.343-356
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• 2010

Plant micropropagation techniques include bud cultures using apical or axillary buds, organogenesis through callus culture or adventitious bud induction, and somatic embryogenesis. In Korea Forest Research Institute (KFRI), the first tissue culture trial in woody plant was initiated from the bud culture of hybrid poplars (Populus alba x P. glandulosa) in 1978. Since then several mass propagation techniques have developed from conifer and hardwood species, resulting in allowing practical application to Poplars, Birches and some oak species. In addition, useful micropropagation and genetic resources conservation techniques were established in some rare and endangered tree species including Abeliophyllum distichum. Among various in vitro propagation techniques, somatic embryogenesis is known to be the most efficient plant regeneration system. Since the first somatic embryo induction was reported in Tilia amurensis by KFRI in 1986, various protocols for direct or indirect somatic embryogenesis systems have developed in conifer and hardwood species including Larix leptolepis, Pinus rigida x P. taeda F1, Kalopanax septemlobus and Liliodendron tulipifera, etc. However, most of these technologies have been developed using juvenile tissues, i.e. immature zygotic embryos or mature embryos. Therefore it has been difficult to directly application to tree breeding program due to their unproven genetic background. Recently remarkable progresses and new approaches have been achieved in mature tree somatic embryogenesis. In this article we reviewed several micropropagation techniques, which have been mainly developed by KFRI and recent international progresses.

• Journal of the Korean Institute of Landscape Architecture
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• v.18 no.4
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• pp.73-85
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• 1991

Rhododendron mucronulatum for. albiflorum, native species is a shrub that has white flowers on May to June, and rare species endangered by people's rash digging or cutting. But its physiological ecological characteristics and propagation method are not being known at all. Therefore, this study was executed to utilize this species as the planting material for landscaping by analysing its habitat environment and growth form, and also experimenting its seed and vegetative propagation, and it field culture and utilization. The results are as follows; 1. The elevation, gradient and direction of this species were 295-1,350m, 10-36$^{\circ}$, northwest respectively. It was found that the species is shade-liking plant that grows under forest cover of average 51.33%. 2. The soil pH and water content of its habitat were 5.4, 25.41% respectively. The organic matter content was 6.29% that was higher than 3.2%, the average organic matter content of forest soil in Korea. 3. Representative plant community within which this species was living was Quercus mongolica community, and its main neighboring species were Lindea obtusiloba, Fraxinus sieboldiana, Rhus trichocarpa, Rhododendron Schlippenbachii, Rododendron mucronulatum. 4. The leaf length and width of this species were 39.18mm, 12.60mm respectively. This result showed that generally its leaf size was larger than that of R. micranthum, R. yedoense var. poukhanense and R. mucronulatum var. ciliatum and smaller than that of R. mucronulatum and R. schlippenbachii. 5. The whole size of its pollen was, as 59${\times}$61$\mu\textrm{m}$, the largest of plants of Rhododendron family including R. mucronulatum and R. mucronulatum var. ciliatum. 6. The result of seed germination experiment at intervals of 5$^{\circ}C$ from 15$^{\circ}C$ to 30$^{\circ}C$ presented the highest germination rate of 94.7% at 20$^{\circ}C$ numerically, but high percent germination at all temperature levels without significant difference. And the seed of this plant proved to be sun-liking seed at requiring dormancy in germination. 7. Through seed germination experiment by treatment of growth regulators such as GA. Thiourea and Kinetin under dark condition, it was found that the effect of GA treatment on germination increase and acceleration was the highest. 8. In greenwood cutting, rooted rate by treatment of various concentration of IBA and NAA on clay and vermiculite bed was not wholly high, but 100ppm plots of both IBA and NAA of clay bed showed relatively good rooted rate. 9. As result of field culture experiment for finding out optimum growth temperature and light intensity, growth conditions such as height, number of leaves, fresh weight and chlorophyll contents were the best at night/day temperature of 20/25$^{\circ}C$ and under 1/2sun. Also, the photosynthetic rate was the highest at 25$^{\circ}C$. Accordingly, it was found that optimum temperature and light intensity for growth of this plant are 25$^{\circ}C$ (day temperature), 50% of natural light respectively.

• Korean Journal of Ichthyology
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• v.10 no.1
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• pp.67-76
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• 1998

The ichthyofauna and the structure of fish community were surveyed from April to November 1997 at eighteen stations in the Yonggang river which is a first tributary located at the middle reach of the Nakdong river system. During the surveyed period, 32 species belonging to ten families were collected. Of them cyprinid fish occupied 53.1% (17 species) and cobitid fish 15.6% (5 species). Thirteen species (40.6%) were known as Korean endemic species. Dominant species were Zacco temmincki (32.78%) and Moroco oxycephalus (15.10%). Zacco platypus, Pungtungia herzi. Niwaella multifasciata, and Odontobutis platycephala were common species. Rare species which occupied less than 0.1% of total individuals were Lampetra reissneri, Pseudorasbora parva, Squalidus chankaensis tsuchigae, Microphysogobio koreensis, Gobiobitia naktongensis, Cobitis rotundicaudata, Nemacheilus toni, Silurus asotus, Silurus microdorsalis, Siniperca scherzeri, and Oreochromis niloticus. A tendancy were shown in regional distribution that Moroco oxycephalus dominated in upper stream, Zacco temmincki and Moroco oxycephalus in mid - upper stream, Zacco temmincki and Niwaella multifasciata in mid - lower stream, and Zacco platypus and microphysogobioid fishes in lower stream. St. 11 which located in mid- reach of Yongam stream and St. 15 and 18 which located in main stream had the most stable and diverse community structure, but St. 1, 5, and 7 were unstable and the simplest community structure.