• Title/Summary/Keyword: R995

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Self-Transmissible IncP R995 Plasmids with Alternative Markers and Utility for Flp/FRT Cloning Strategies

  • Santiago, Clayton P.;Quick, Laura N.;Wilson, James W.
    • Journal of Microbiology and Biotechnology
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    • v.21 no.11
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    • pp.1123-1126
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    • 2011
  • The IncP plasmid R995 has been a useful self-transmissible, broad-host-range vector for a number of applications including the recombinase/conjugation-based cloning of large genomic DNA segments. However, R995 derivatives (or related plasmids) expressing a wide range of different resistance markers and Flp recombinase target sites do not exist in the literature. In addition, documented strategies for applying such plasmids in cloning applications that take advantage of conjugation for the convenient isolation and recovery of constructs are extremely limited. Here, we report a new series of R995 plasmids with alternative markers to increase options for applications in backgrounds already expressing resistance to a particular antibiotic(s). These R995 plasmids have been engineered to contain FRT sites that can be used for recombinase-based cloning. We demonstrate the utility of this approach by cloning 20 kb regions from the Salmonella Typhimurium and Escherichia coli genomes and by cloning DNA from an exogenous plasmid source. To our knowledge, this represents the first systematic engineering of an intact, self-transmissible IncP plasmid with a series of alternative antibiotic markers and FRT sites.

Plastic Substrate for Flexible Display

  • Kim, In-Sun;Hwang, Hee-Nam;Choi, Jae-Moon;Yeom, Eun-Hee;Park, Yong-Ho
    • 한국정보디스플레이학회:학술대회논문집
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    • 2005.07b
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    • pp.995-997
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    • 2005
  • A plastic substrate for flexible display is developed. The gas barrier and optical properties of the substrate is improved through depositing silicon oxide/nitride layer and coating polymer layer on plastic film by sputtering process and wet coating process. Roll to roll processes will guarantee the productivity in the whole production process of the plastic substrate.

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CoMFA Analysis on Inhibitory Effect of $3{\beta}$-Hydroxy-12-oleanen-28-oic Acid Analogues on PTP-1B Activity and Prediction of Active Compounds ($3{\beta}$-Hydroxy-12-oleanen-28-oic Acid 유도체들의 PTP-1B 저해활성에 대한 CoMFA 분석과 활성 분자들의 예측)

  • Kim, Sang-Jin;Kim, Se-Gon;Sung, Nack-Do
    • Journal of the Society of Cosmetic Scientists of Korea
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    • v.34 no.2
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    • pp.109-115
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    • 2008
  • The comparative molecular field analyses(CoMFA) models between the substituents with changing groups($R_1{\sim}R_4$) of $3{\beta}$-hydroxy-12-oleanen-28-oic acid derivatives as substrate molecule and their inhibitory activities($pI_{50}$) against protein tyrosine phosphatase(PTP)-1B were derived and discussed quantitatively. The optimized CoMFA F1 model have best predictability and fitness($r^2_{cv.}=0.654$ and $r^2_{ncv.}=0.995$). The order of contribution ratio (%) with CoMFA fields on the inhibitory activities was a steric field(53.0%), electrostatic field(36.2%) and hydrophobic field(10.8%). From the analytical results of CoMFA contour maps, the inhibitory activities were dependent on the R4 group in substrate molecules. Particularly, the new active compounds(P1 & P2) with the inhibitory activity against melanin synthesis were expected.

Novel Anthracene Derivatives Isolated from Rice Hulls of Oryza sativa and Their Growth Inhibitory Activity of Radish Seed

  • Jeong, Il-Min;Lim, Yoong-Ho;Ali, Mohd;Sultana, Shahnaz;Ahmad, Ateeque
    • Bulletin of the Korean Chemical Society
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    • v.27 no.7
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    • pp.995-1000
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    • 2006
  • Three new compounds orizaanthracenol (1-methoxyanthracen-2-ol, 1), 1-hydroxy-7-((2S,3R,4R,5S)-2'',3'',4''-trihydroxy-5''-(hydroxymethyl)tetrahydro-2H-pyran-1-yloxy)anthracen- 2-yl 3',7'-dimethyloctanoate (2) and 1-hydroxy-7-((2S,3R,4R,5S)-2'',3'',4''-trihydroxy-5''-(hydroxymethyl)tetrahydro-2H-pyran-1-yloxy)anthracen- 2-yl 3',7',11',15',19'-pentamethyltricosanoate (3) have been isolated and determined from the rice hulls of Oryza sativa. The structures of the compounds were elucidated using 1D and 2D NMR spectral methods, viz: 1H-NMR, 13C-NMR, DEPT, COSY and HSQC, and HMBC aided by IR, EIMS and FAB-MS. These isolated compounds were tested in bioassay on germination of radish to detect their inhibitory activities, in which compound 1 exhibited the most inhibition at the concentration of 40 ppm was 50.96% of total dry weight. Furthermore, germination and growth of radish were reduced by 27 to 48%, and dry weight of shoot and root were arranged from 50 to 52%, whilst compounds 2 and 3 exhibited weak inhibition than 1.

Relationship among Elongation Periods of Young Spikes, Internodes and Leaf-sheaths in Wheat (Triticum aestivum L.) (소맥의 유수, 절간 및 엽초의 신장시기와의 관계)

  • 김석동;하용웅
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.27 no.3
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    • pp.238-242
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    • 1982
  • The growth of spike, internode and leaf sheath in winter wheat(Tritican vulgale Vill.) was investigated by measuring them 10 times from April 15 to May 30, with 5 days intervals, in 1980. The variety used was Glumil(Suweon #215) which was newly developed at Wheat and Barley Research Institute in Suweon, Korea. During the periods investigated, the spike elongated from 0.6cm to 8.3cm. The spike began to elongate rapidly from 20 days before heading (April 25) and finished nearly off the elongation at 5 days before heading (May 10). The length of the spike showed highly significant correlation with that of 3rd internode ($r=0.974^{***}$), and. with that of first leaf sheath($r=0.954^{***}$) from the top of wheat plant. Correlation between the length of the 3rd internode and that of the first leaf sheath was also very high($r=0.995^{***}$). A major elongation of the spike occurred concurrently with the elongation of the third internode and with that of the first leaf sheath.

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Inter- and Intra-Observer Variability of the Volume of Cervical Ossification of the Posterior Longitudinal Ligament Using Medical Image Processing Software

  • Shin, Dong Ah;Ji, Gyu Yeul;Oh, Chang Hyun;Kim, Keung Nyun;Yoon, Do Heum;Shin, Hyunchul
    • Journal of Korean Neurosurgical Society
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    • v.60 no.4
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    • pp.441-447
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    • 2017
  • Objective : Computed tomography (CT)-based method of three dimensional (3D) analysis ($MIMICS^{(R)}$, Materialise, Leuven, Belgium) is reported as very useful software for evaluation of OPLL, but its reliability and reproducibility are obscure. This study was conducted to evaluate the accuracy of $MIMICS^{(R)}$ system, and inter- and intra-observer reliability in the measurement of OPLL. Methods : Three neurosurgeons independently analyzed the randomly selected 10 OPLL cases with medical image processing software ($MIMICS^{(R)}$) which create 3D model with Digital Imaging and Communication in Medicine (DICOM) data from CT images after brief explanation was given to examiners before the image construction steps. To assess the reliability of inter- and intra-examiner intraclass correlation coefficient (ICC), 3 examiners measured 4 parameters (volume, length, width, and length) in 10 cases 2 times with 1-week interval. Results : The inter-examiner ICCs among 3 examiners were 0.996 (95% confidence interval [CI], 0.987-0.999) for volume measurement, 0.973 (95% CI, 0.907-0.978) for thickness, 0.969 (95% CI, 0.895-0.993) for width, and 0.995 (95% CI, 0.983-0.999) for length. The intra-examiner ICCs were 0.994 (range, 0.991-0.996) for volume, 0.996 (range, 0.944-0.998) for length, 0.930 (range, 0.873-0.947) for width, and 0.987 (range, 0.985-0.995) for length. Conclusion : The medical image processing software ($MIMICS^{(R)}$) provided detailed quantification OPLL volume with minimal error of inter- and intra-observer reliability in the measurement of OPLL.

Development of an in vitro culture method for harvesting the free-living infective larvae of Strongyloides venezuelensis (베네수엘라분선충 (Strongyloides venezuelensis Brumpt, 1934) 자유생활형 유충의 시험관 내 배양 기술 개발)

  • ;M.
    • Parasites, Hosts and Diseases
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    • v.36 no.1
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    • pp.15-22
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    • 1998
  • An in uitro culture technique was established for harvesting Strongwloides venezuelensis free-living infective larvae using a nutrient broth medium as a substitute for rat-feces in polyvinyl culture bags ($10{\;}{\times}{\;}12{\;}cm$). The egg hatch rate V) in sterile saline at different incubation temperatures (X) was expressed as the quadratic function, Y = $-0.192X^2$ + 8.673x - 19.550 (r = 0.901). The highest (100%) egghatch rate was observed at $25^{\circ}C$. A significant difference (p<0.05) in development rate W) of free-living infective larvae was observed between different concentrations of nutrient broth (X) which was highest (20.6%1 in 0.12% nutrient broth concentrations, incubated at $20^{\circ}C$ for 5 days [Y = $-864.032X^2$ + 245.995X- 0.560 (r = 0.875)]. Yields (Y) of infective larvae were observed relatively high when the culture medium was incubated at higher temperatures (X) which peaked at $25^{\circ}C$ (20.0%) than at lower temperatures. $15^{\circ}C$M (10.9%) and $20^{\circ}C$ (18.1%) [Y = $-0.189X^2$ + 8.387x- 72.795 (r = 0.981)]. The period W) required for the development of infective larvae decreased with higher incubation temperatures (X) [Y = $0.035X^2$ - 2.025X + 32.375 (r = 0.995)] The highest yield (19.2%) of infective larvae was obtained from culture bag inoculated with 15.000 eggs than with below and over 15,000 eggs in 0.12% nutrient broth and incubated at $25^{\circ}C$ for 4 days. The newly adapted culture method (from egg to third-stage larva) may be useful as a bio-bar/bioassay system for screening new chemical products, anthelmintics and pesticides, as well as for parasito immunological studies with Strongwloides species.

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Synthesis and Electrochemical Properties of $LiNi_{1-y-z}(M_1)_y(M_2)_zO_2$ for the Development of Cathode Materials with Large Capacity (고용량 양극재료 개발을 위한 $LiNi_{1-y-z}(M_1)_y(M_2)_zO_2$의 합성과 전기화학적 특성)

  • Song, Myoung-Youp
    • Journal of Hydrogen and New Energy
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    • v.18 no.3
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    • pp.325-333
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    • 2007
  • [ $LiNi_{0.995}Al_{0.005}O_2$ ], $LiNi_{0.990}Ti_{0.010}O_2$ and $LiNi_{0.0990}Al_{0.005}Ti_{0.005}O_2$ were synthesized with a combustion method by calcining in an $O_2$ stream at $750^{\circ}C$ for 36 h. The X-ray diffraction patterns of these synthesized samples showed $-NaFeO_2$ structure of rhombohedral system(space group; $R{\bar{3}}\;m$) with no evidence of impurities. Among these samples, $LiNi_{0.995}Al_{0.005}O_2$ exhibited comparatively high first discharge capacity and discharge capacity, and the best cycling performance. $LiNi_{0.995}Al_{0.005}O_2$ had the first discharge capacity of 165.2 mA h/g and a discharge capacity of 116.7 mA h/g at the 50th cycle at 0.1C rate. It showed the first discharge capacity of 141.0 mA h/g and a discharge capacity of 93.5 mA h/g at the 50th cycle at 0.5C rate.

Relationships Between the Development of Cyanobacterial Bloom and the Changes of Environmental Factors in Lake Daechung (대청호의 남조류 수화 발달과 환경요인 변화와의 상관 관계)

  • Lee, Jung-Joon;Park, Jong-Geun;Lee, Jung-Ho
    • Korean Journal of Ecology and Environment
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    • v.36 no.3 s.104
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    • pp.269-276
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    • 2003
  • The study was performed to understand the relationships of cyanobacterial bloom and environmental factors in Lake Daechung. The samples were collected weekly from June to October in 2001. The cyanobacterial bloom was divided into the three phases of the early phase, the middle phase and the late phase by phytoplankton standing crops. For the early phase, the correlation coefficients between chl- a and TP, and chl- a and $PO_4$-P were 0.986 and 0.894 respectively. Therefore, phosphorus was a main environmental factor in the development of cyanobacterial bloom. Zeu/Zm ratio and chl-a showed negative correlation of r = -0.995. At the late phase, $PO_4$-P showed the highest relationship (r = 0.958), and TP and temperature showed relatively high relationships (r = 0.857 and r = 0.813). At the late phase, $NH_3$-N showed highly positive relationship (r = 0.921). It was confirmed that $PO_4$-P was the most important contribution factor for the bloom through the regression analysis on the environmental factors. As the result, the decrease of Zeu/Zm ratio and the increase of P concentration influenced cyanobacterial bloom developed rapidly in the early phase. Also the cyanobacterial bloom was decreased in proportion to decreasing of $NH_3$-N concentration in the late phase. It was expected that observation of $NH_3$-N may be a very useful factor on monitoring of the decreasing situation of the bloom.

ON TYPES OF NOETHERIAN LOCAL RINGS AND MODULES

  • Lee, Ki-Suk
    • Journal of the Korean Mathematical Society
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    • v.44 no.4
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    • pp.987-995
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    • 2007
  • We investigate some results which concern the types of Noetherian local rings. In particular, we show that if r(Ap) ${\le}$ depth Ap + 1 for each prime ideal p of a quasi-unmixed Noetherian local ring A, then A is Cohen-Macaulay. It is also shown that the Kawasaki conjecture holds when dim A ${\le}$ depth A + 1. At the end, we deal with some analogous results for modules, which are derived from the results studied on rings.